RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W SCS2P40075 244 aaKnown RBP5.5□□□□□ -1.53
PDE1YGL248W SIP5P40210 489 aaKnown RBP5.5□□□□□ -1.53
PDE1YGL248W YJR061WP40355 935 aa5.5□□□□□ -1.53
PDE1YGL248W HNT2P49775 206 aa5.5□□□□□ -1.53
PDE1YGL248W MEC3Q02574 474 aa5.5□□□□□ -1.53
PDE1YGL248W SLK19Q08581 821 aaKnown RBP5.5□□□□□ -1.53
PDE1YGL248W CTI6Q08923 506 aa5.5□□□□□ -1.53
PDE1YGL248W TY3A-GQ12173 290 aa5.5□□□□□ -1.53
PDE1YGL248W RBD2Q12270 262 aa5.5□□□□□ -1.53
PDE1YGL248W GRX6Q12438 231 aa5.5□□□□□ -1.53
PDE1YGL248W AVL9Q12500 764 aa5.5□□□□□ -1.53
PDE1YGL248W TY3A-IQ99219 290 aa5.5□□□□□ -1.53
PDE1YGL248W DED1P06634 604 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W CAR2P07991 424 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W RPL19AP0CX82 189 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W RPL19BP0CX83 189 aaPredicted RBP5.49□□□□□ -1.53
PDE1YGL248W ADH4P10127 382 aa5.49□□□□□ -1.53
PDE1YGL248W BET2P20133 325 aa5.49□□□□□ -1.53
PDE1YGL248W CPR2P23285 205 aa5.49□□□□□ -1.53
PDE1YGL248W CAD1P24813 409 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W YCR051WP25631 222 aa5.49□□□□□ -1.53
PDE1YGL248W MGM101P32787 269 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W SRP101P32916 621 aa5.49□□□□□ -1.53
PDE1YGL248W PHO11P35842 467 aa5.49□□□□□ -1.53
PDE1YGL248W MMS4P38257 691 aa5.49□□□□□ -1.53
PDE1YGL248W GDT1P38301 280 aaPredicted RBP5.49□□□□□ -1.53
PDE1YGL248W EFM2P38347 419 aa5.49□□□□□ -1.53
PDE1YGL248W PHO12P38693 467 aa5.49□□□□□ -1.53
PDE1YGL248W YHR054CP38780 354 aa5.49□□□□□ -1.53
PDE1YGL248W MTW1P39731 289 aa5.49□□□□□ -1.53
PDE1YGL248W YIL077CP40508 320 aa5.49□□□□□ -1.53
PDE1YGL248W ALK1P43633 760 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W ARC1P46672 376 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W MRX6P48564 524 aa5.49□□□□□ -1.53
PDE1YGL248W NIT3P49954 291 aa5.49□□□□□ -1.53
PDE1YGL248W ASE1P50275 885 aa5.49□□□□□ -1.53
PDE1YGL248W PDR16P53860 351 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W EFR3Q03653 782 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W UTP5Q04177 643 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W MMR1Q06324 491 aa5.49□□□□□ -1.53
PDE1YGL248W PML1Q07930 204 aaPredicted RBP5.49□□□□□ -1.53
PDE1YGL248W ALG6Q12001 544 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W RCN2Q12044 265 aa5.49□□□□□ -1.53
PDE1YGL248W GET3Q12154 354 aaKnown RBP5.49□□□□□ -1.53
PDE1YGL248W CDC24P11433 854 aaPredicted RBP5.48□□□□□ -1.53
PDE1YGL248W ADE2P21264 571 aaKnown RBP5.48□□□□□ -1.53
PDE1YGL248W BOS1P25385 244 aa5.48□□□□□ -1.53
PDE1YGL248W PER1P25625 357 aa5.48□□□□□ -1.53
PDE1YGL248W CTF13P35203 478 aa5.48□□□□□ -1.53
PDE1YGL248W FAT1P38225 669 aa5.48□□□□□ -1.53
PDE1YGL248W RFC3P38629 340 aa5.48□□□□□ -1.53
PDE1YGL248W SRP68P38687 599 aaKnown RBP5.48□□□□□ -1.53
PDE1YGL248W MUP3P38734 546 aa5.48□□□□□ -1.53
PDE1YGL248W LYS9P38999 446 aa5.48□□□□□ -1.53
PDE1YGL248W FLC2P39719 783 aa5.48□□□□□ -1.53
PDE1YGL248W SIP4P46954 829 aa5.48□□□□□ -1.53
PDE1YGL248W MCM6P53091 1017 aaKnown RBP5.48□□□□□ -1.53
PDE1YGL248W RET3P53600 189 aa5.48□□□□□ -1.53
PDE1YGL248W SMA1Q02651 245 aa5.48□□□□□ -1.53
PDE1YGL248W RTN1Q04947 295 aaKnown RBP5.48□□□□□ -1.53
PDE1YGL248W SSQ1Q05931 657 aaPredicted RBP5.48□□□□□ -1.53
PDE1YGL248W BCP1Q06338 283 aa5.48□□□□□ -1.53
PDE1YGL248W YLR413WQ06689 675 aa5.48□□□□□ -1.53
PDE1YGL248W IWR1Q07532 353 aaPredicted RBP5.48□□□□□ -1.53
PDE1YGL248W FMP45Q07651 309 aa5.48□□□□□ -1.53
PDE1YGL248W LOT6Q07923 191 aa5.48□□□□□ -1.53
PDE1YGL248W RPN5Q12250 445 aaKnown RBP5.48□□□□□ -1.53
PDE1YGL248W YOL159C-AQ3E769 90 aa5.48□□□□□ -1.53
PDE1YGL248W YOR111WQ99210 232 aa5.48□□□□□ -1.53
PDE1YGL248W YRF1-4O13559 1382 aa5.47□□□□□ -1.53
PDE1YGL248W JIP3O13555 125 aa5.47□□□□□ -1.53
PDE1YGL248W RPL6BP05739 176 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W THR4P16120 514 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W STE11P23561 717 aa5.47□□□□□ -1.53
PDE1YGL248W URA7P28274 579 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W BUD2P33314 1104 aa5.47□□□□□ -1.53
PDE1YGL248W MSN4P33749 630 aa5.47□□□□□ -1.53
PDE1YGL248W STE13P33894 931 aa5.47□□□□□ -1.53
PDE1YGL248W YKL077WP36081 392 aa5.47□□□□□ -1.53
PDE1YGL248W ADH5P38113 351 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W YBL029WP38201 376 aa5.47□□□□□ -1.53
PDE1YGL248W NTC20P38302 140 aaPredicted RBP5.47□□□□□ -1.53
PDE1YGL248W SIP3P38717 1229 aa5.47□□□□□ -1.53
PDE1YGL248W SMF1P38925 575 aa5.47□□□□□ -1.53
PDE1YGL248W SSP120P39931 234 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W YRB2P40517 327 aa5.47□□□□□ -1.53
PDE1YGL248W ULP2P40537 1034 aaPredicted RBP5.47□□□□□ -1.53
PDE1YGL248W MPH1P40562 993 aa5.47□□□□□ -1.53
PDE1YGL248W LOC1P43586 204 aaPredicted RBP5.47□□□□□ -1.53
PDE1YGL248W ROK1P45818 564 aaPredicted RBP5.47□□□□□ -1.53
PDE1YGL248W RPL6AQ02326 176 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W RRP17Q04031 235 aaPredicted RBP5.47□□□□□ -1.53
PDE1YGL248W SEG1Q04279 960 aa5.47□□□□□ -1.53
PDE1YGL248W MSC3Q05812 728 aa5.47□□□□□ -1.53
PDE1YGL248W ECM7Q06200 448 aa5.47□□□□□ -1.53
PDE1YGL248W SKG3Q06315 1026 aa5.47□□□□□ -1.53
PDE1YGL248W CIR2Q08822 631 aa5.47□□□□□ -1.53
PDE1YGL248W NMD4Q12129 218 aa5.47□□□□□ -1.53
PDE1YGL248W LSP1Q12230 341 aaKnown RBP5.47□□□□□ -1.53
PDE1YGL248W SUI3P09064 285 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms