RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRB1	YEL060C	POL4	P25615	582 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	SEC1	P30619	724 aa	Known RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	NGG1	P32494	702 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	DUR3	P33413	735 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	WHI3	P34761	661 aa	Known RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	DLD3	P39976	496 aa	Known RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	ECM10	P39987	644 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	NPP2	P39997	493 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	FCY21	P40039	528 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	YRB2	P40517	327 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	SNZ3	P43545	298 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	VTC4	P47075	721 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	COP1	P53622	1201 aa	Known RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	SNZ2	P53824	298 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	CUS2	P53830	285 aa	Predicted RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	BNI4	P53858	892 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	YCS4	Q06156	1176 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	LAP2	Q10740	671 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	RCN2	Q12044	265 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	MNL2	Q12205	849 aa		7.32	□□□□□ -1.24
PRB1	YEL060C	HSH49	Q99181	213 aa	Predicted RBP	7.32	□□□□□ -1.24
PRB1	YEL060C	RPL17A	P05740	184 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	RAD18	P10862	487 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	MSM1	P22438	575 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	VPS3	P23643	1011 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	CTR86	P25355	563 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	YCR016W	P25617	290 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	SAC1	P32368	623 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	YKU70	P32807	602 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	ATG19	P35193	415 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	MEF2	P39677	819 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	RPN11	P43588	306 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	GPI1	P53306	609 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	SLU7	Q02775	382 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	TAF11	Q04226	346 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	SVF1	Q05515	481 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	RSC2	Q06488	889 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	GPI13	Q07830	1017 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	NTG2	Q08214	380 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
PRB1	YEL060C	SPE1	P08432	466 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	HMG2	P12684	1045 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	PMA2	P19657	947 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	URA10	P30402	227 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	PHA2	P32452	334 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	NUP2	P32499	720 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	EAP1	P36041	632 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	TDP1	P38319	544 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	SWC5	P38326	303 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	VHR2	P40041	505 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	BIR1	P47134	954 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	PSP2	P50109	593 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	NMA111	P53920	997 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	YNL058C	P53947	316 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	REX2	P54964	269 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	SVL3	Q03088	825 aa	Known RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	ABZ2	Q03266	374 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	GLO2	Q05584	274 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	SSQ1	Q05931	657 aa	Predicted RBP	7.31	□□□□□ -1.24
PRB1	YEL060C	GMC2	Q06201	188 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	GAS5	Q08193	484 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	RSB1	Q08417	382 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	MUM3	Q08750	479 aa		7.31	□□□□□ -1.24
PRB1	YEL060C	RPL6B	P05739	176 aa	Known RBP	7.3	□□□□□ -1.24
PRB1	YEL060C	MRP13	P12686	339 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	FBA1	P14540	359 aa	Known RBP	7.3	□□□□□ -1.24
PRB1	YEL060C	YCR015C	P25616	317 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	CMK1	P27466	446 aa	Known RBP	7.3	□□□□□ -1.24
PRB1	YEL060C	ATP7	P30902	174 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	AEP1	P32493	518 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	PPG1	P32838	368 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	PEX6	P33760	1030 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	RDH54	P38086	958 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	QNS1	P38795	714 aa	Known RBP	7.3	□□□□□ -1.24
PRB1	YEL060C	YFL040W	P43562	540 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	YFL012W	P43580	148 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	IRC6	P43615	237 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	AVT1	P47082	602 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	ROD1	Q02805	837 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	YMR099C	Q03161	297 aa	Known RBP	7.3	□□□□□ -1.24
PRB1	YEL060C	TRS130	Q03660	1102 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	FMP45	Q07651	309 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	BRE4	Q07660	1125 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	ULA1	Q12059	462 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	GIS3	Q12418	502 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	YEL077C	Q3E7X8	1277 aa		7.3	□□□□□ -1.24
PRB1	YEL060C	ATP6	P00854	259 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	RHO2	P06781	192 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	MSS18	P08593	268 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	CMK2	P22517	447 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	HSP30	P25619	332 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	VPS21	P36017	210 aa	Known RBP	7.29	□□□□□ -1.24
PRB1	YEL060C	YBL028C	P38202	106 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	RFS1	P38234	210 aa	Known RBP	7.29	□□□□□ -1.24
PRB1	YEL060C	GUA1	P38625	525 aa	Known RBP	7.29	□□□□□ -1.24
PRB1	YEL060C	HXT5	P38695	592 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	ARN1	P38731	627 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	GDH3	P39708	457 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	NPR2	P39923	615 aa		7.29	□□□□□ -1.24
PRB1	YEL060C	MGS1	P40151	587 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms