RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C ILV2P07342 687 aaKnown RBP1.98□□□□□ -2.09
SPG3YDR504C BAR1P12630 587 aa1.98□□□□□ -2.09
SPG3YDR504C HXT4P32467 576 aa1.98□□□□□ -2.09
SPG3YDR504C RAD24P32641 659 aa1.98□□□□□ -2.09
SPG3YDR504C YKL091CP33324 310 aaKnown RBP1.98□□□□□ -2.09
SPG3YDR504C RNH70P53331 553 aa1.98□□□□□ -2.09
SPG3YDR504C YPR003CP53394 754 aa1.98□□□□□ -2.09
SPG3YDR504C TFB2Q02939 513 aa1.98□□□□□ -2.09
SPG3YDR504C PTC6P25646 442 aa1.97□□□□□ -2.09
SPG3YDR504C OCT1P35999 772 aa1.97□□□□□ -2.09
SPG3YDR504C VBA2P38358 474 aaKnown RBP1.97□□□□□ -2.09
SPG3YDR504C STB5P38699 743 aa1.97□□□□□ -2.09
SPG3YDR504C ATG27P46989 271 aa1.97□□□□□ -2.09
SPG3YDR504C THI3Q07471 609 aa1.97□□□□□ -2.09
SPG3YDR504C YOL098CQ12496 1037 aa1.97□□□□□ -2.09
SPG3YDR504C BUD14P27637 709 aa1.96□□□□□ -2.1
SPG3YDR504C SMA1Q02651 245 aa1.96□□□□□ -2.1
SPG3YDR504C FPR4Q06205 392 aaPredicted RBP1.96□□□□□ -2.1
SPG3YDR504C PIG1Q06216 648 aa1.96□□□□□ -2.1
SPG3YDR504C APM4Q99186 491 aa1.96□□□□□ -2.1
SPG3YDR504C CBP1P07252 654 aa1.95□□□□□ -2.1
SPG3YDR504C MGR1P25573 417 aa1.95□□□□□ -2.1
SPG3YDR504C PRP19P32523 503 aaKnown RBP1.95□□□□□ -2.1
SPG3YDR504C LNP1P38878 278 aa1.95□□□□□ -2.1
SPG3YDR504C IML2P47031 731 aa1.95□□□□□ -2.1
SPG3YDR504C MDR1P53258 950 aa1.95□□□□□ -2.1
SPG3YDR504C BOR1P53838 576 aa1.95□□□□□ -2.1
SPG3YDR504C MCH4Q08268 501 aa1.95□□□□□ -2.1
SPG3YDR504C FRE3Q08905 711 aa1.95□□□□□ -2.1
SPG3YDR504C KGD2P19262 463 aaPredicted RBP1.94□□□□□ -2.1
SPG3YDR504C AEP2P22136 580 aa1.94□□□□□ -2.1
SPG3YDR504C ARG1P22768 420 aa1.94□□□□□ -2.1
SPG3YDR504C RIM2P38127 377 aa1.94□□□□□ -2.1
SPG3YDR504C UBP8P50102 471 aa1.94□□□□□ -2.1
SPG3YDR504C SDA1P53313 767 aaKnown RBP1.94□□□□□ -2.1
SPG3YDR504C NGL1Q08213 363 aaKnown RBP1.94□□□□□ -2.1
SPG3YDR504C YPL191CQ08930 360 aa1.94□□□□□ -2.1
SPG3YDR504C LEA1Q08963 238 aaPredicted RBP1.94□□□□□ -2.1
SPG3YDR504C PPT2Q12036 173 aa1.94□□□□□ -2.1
SPG3YDR504C PTA1Q01329 785 aaPredicted RBP1.93□□□□□ -2.1
SPG3YDR504C CWH43P25618 953 aa1.92□□□□□ -2.1
SPG3YDR504C MSH1P25846 959 aa1.92□□□□□ -2.1
SPG3YDR504C RPN2P32565 945 aaKnown RBP1.92□□□□□ -2.1
SPG3YDR504C TRS65P32893 560 aa1.92□□□□□ -2.1
SPG3YDR504C MTC6P38849 526 aa1.92□□□□□ -2.1
SPG3YDR504C YJR061WP40355 935 aa1.92□□□□□ -2.1
SPG3YDR504C BSC1Q12140 328 aa1.92□□□□□ -2.1
SPG3YDR504C YLL056CQ12177 298 aa1.92□□□□□ -2.1
SPG3YDR504C ERC1P38767 581 aa1.91□□□□□ -2.1
SPG3YDR504C YPI1P43587 155 aa1.91□□□□□ -2.1
SPG3YDR504C NNF1P47149 201 aa1.91□□□□□ -2.1
SPG3YDR504C POB3Q04636 552 aaKnown RBP1.91□□□□□ -2.1
SPG3YDR504C DIN7Q12086 430 aa1.91□□□□□ -2.1
SPG3YDR504C ATP12P22135 325 aa1.9□□□□□ -2.11
SPG3YDR504C LEU5P38702 357 aa1.9□□□□□ -2.11
SPG3YDR504C IDS2P46958 469 aa1.9□□□□□ -2.11
SPG3YDR504C SWF1Q04629 336 aa1.9□□□□□ -2.11
SPG3YDR504C YCR006CP25350 157 aa1.89□□□□□ -2.11
SPG3YDR504C YCR061WP25639 631 aa1.89□□□□□ -2.11
SPG3YDR504C GZF3P42944 551 aaKnown RBP1.89□□□□□ -2.11
SPG3YDR504C YNL181WP53878 407 aa1.89□□□□□ -2.11
SPG3YDR504C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SPG3YDR504C VPS5Q92331 675 aa1.89□□□□□ -2.11
SPG3YDR504C URA3P03962 267 aa1.88□□□□□ -2.11
SPG3YDR504C RPF2P36160 344 aaKnown RBP1.88□□□□□ -2.11
SPG3YDR504C MNT2P53059 558 aa1.88□□□□□ -2.11
SPG3YDR504C RBG2P53295 368 aaKnown RBP1.88□□□□□ -2.11
SPG3YDR504C YER145C-AA0A023PYF4 145 aa1.87□□□□□ -2.11
SPG3YDR504C GPA1P08539 472 aa1.87□□□□□ -2.11
SPG3YDR504C PRE2P30656 287 aaKnown RBP1.87□□□□□ -2.11
SPG3YDR504C RTS1P38903 757 aa1.87□□□□□ -2.11
SPG3YDR504C IRC5P43610 853 aa1.87□□□□□ -2.11
SPG3YDR504C YOR378WQ08902 515 aa1.87□□□□□ -2.11
SPG3YDR504C FAP7Q12055 197 aaPredicted RBP1.87□□□□□ -2.11
SPG3YDR504C PDR3P33200 976 aa1.86□□□□□ -2.11
SPG3YDR504C SER1P33330 395 aaKnown RBP1.86□□□□□ -2.11
SPG3YDR504C PRE5P40302 234 aaKnown RBP1.86□□□□□ -2.11
SPG3YDR504C MNN11P46985 422 aaKnown RBP1.86□□□□□ -2.11
SPG3YDR504C ASK10P48361 1146 aa1.86□□□□□ -2.11
SPG3YDR504C ORC1P54784 914 aaPredicted RBP1.86□□□□□ -2.11
SPG3YDR504C MTQ2Q03920 221 aaPredicted RBP1.86□□□□□ -2.11
SPG3YDR504C YDR415CQ04033 374 aaPredicted RBP1.86□□□□□ -2.11
SPG3YDR504C CRF1Q04930 467 aa1.86□□□□□ -2.11
SPG3YDR504C HXT1P32465 570 aa1.85□□□□□ -2.11
SPG3YDR504C SIP1P32578 815 aa1.85□□□□□ -2.11
SPG3YDR504C DID4P36108 232 aa1.85□□□□□ -2.11
SPG3YDR504C PTH1P38876 190 aaKnown RBP1.85□□□□□ -2.11
SPG3YDR504C NPA3P47122 385 aa1.85□□□□□ -2.11
SPG3YDR504C UTP21Q06078 939 aaPredicted RBP1.85□□□□□ -2.11
SPG3YDR504C GUK1P15454 187 aaKnown RBP1.84□□□□□ -2.11
SPG3YDR504C GLN3P18494 730 aa1.84□□□□□ -2.11
SPG3YDR504C TYS1P36421 394 aaKnown RBP1.84□□□□□ -2.11
SPG3YDR504C SRP68P38687 599 aaKnown RBP1.84□□□□□ -2.11
SPG3YDR504C YIR014WP40570 242 aa1.84□□□□□ -2.11
SPG3YDR504C RNR4P49723 345 aaKnown RBP1.84□□□□□ -2.11
SPG3YDR504C YNL234WP53857 426 aa1.84□□□□□ -2.11
SPG3YDR504C RPL8AP17076 256 aaKnown RBP1.83□□□□□ -2.12
SPG3YDR504C RPS2P25443 254 aaKnown RBP1.83□□□□□ -2.12
SPG3YDR504C YPK3P38070 525 aa1.83□□□□□ -2.12
SPG3YDR504C PEA2P40091 420 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms