RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	DAL5	P15365	543 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	YCR015C	P25616	317 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	FEN2	P25621	512 aa	Known RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	KTR3	P38130	404 aa	Predicted RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	RXT2	P38255	430 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	ARB1	P40024	610 aa	Known RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	PIG2	P40187	538 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	PFK26	P40433	827 aa	Known RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	YIL166C	P40445	542 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	OGG1	P53397	376 aa	Predicted RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	YML119W	Q03208	357 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	NGL3	Q03210	505 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	RXT3	Q07458	294 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	ACK1	Q07622	623 aa	Predicted RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	PRP28	P23394	588 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	BCS1	P32839	456 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	MDL1	P33310	695 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	LYS9	P38999	446 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	NUP60	P39705	539 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	TMN3	P40071	706 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	RGI2	P40188	164 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	BAP3	P41815	604 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	AMA1	P50082	593 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	GLO1	P50107	326 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	SPT20	P50875	604 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	PRP43	P53131	767 aa	Known RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	MTL1	P53214	551 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	GET3	Q12154	354 aa	Known RBP	4.86	□□□□□ -1.63
GGA1	YDR358W	GRX6	Q12438	231 aa		4.86	□□□□□ -1.63
GGA1	YDR358W	LAT1	P12695	482 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	ADK2	P26364	225 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	EFT1	P32324	842 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	NTH1	P32356	751 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	KES1	P35844	434 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	REG2	P38232	338 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	ROK1	P45818	564 aa	Predicted RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	TAM41	P53230	385 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	YGR054W	P53235	642 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	MRPS35	P53292	345 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	NGL2	Q03264	515 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	HOF1	Q05080	669 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	YDR286C	Q05530	114 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	ATG23	Q06671	453 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	RIX7	Q07844	837 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	TCO89	Q08921	799 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	PGC1	Q08959	321 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	SWT1	Q12104	458 aa		4.85	□□□□□ -1.63
GGA1	YDR358W	PNO1	Q99216	274 aa	Known RBP	4.85	□□□□□ -1.63
GGA1	YDR358W	MNE1	P24720	663 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	CLB3	P24870	427 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	STE50	P25344	346 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	CDC15	P27636	974 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	UBP11	P36026	717 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	YIR042C	P40586	236 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	YGR066C	P53242	292 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	PIL1	P53252	339 aa	Known RBP	4.84	□□□□□ -1.63
GGA1	YDR358W	FRE5	Q08908	694 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	RIM20	Q12033	661 aa		4.84	□□□□□ -1.63
GGA1	YDR358W	YCR061W	P25639	631 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	BRF1	P29056	596 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	TOD6	P34219	525 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	AUR1	P36107	401 aa	Predicted RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	SRO77	P38163	1010 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	UBP13	P38187	747 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	RFC1	P38630	861 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	SMF1	P38925	575 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	YJL206C	P39529	758 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	GDI1	P39958	451 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	MET18	P40469	1032 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	FKH2	P41813	862 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	SSU1	P41930	458 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	INN1	P53901	409 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	CRF1	Q04930	467 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	YLR224W	Q05947	369 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	ECM22	Q05958	814 aa	Predicted RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	YLR345W	Q06137	509 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	CHS5	Q12114	671 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	YJR112W-A	Q3E743	109 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
GGA1	YDR358W	KAR3	P17119	729 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	CAD1	P24813	409 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	KAR4	P25583	335 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	AAD3	P25612	363 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	URK1	P27515	501 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	CAP1	P28495	268 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	GPI10	P30777	616 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	DPH2	P32461	534 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	RPN2	P32565	945 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	LST4	P34239	828 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	FMO1	P38866	432 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	LTP1	P40347	161 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	RFX1	P48743	811 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	JJJ1	P53863	590 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	YEH1	Q07804	573 aa		4.83	□□□□□ -1.64
GGA1	YDR358W	SMF3	Q12078	473 aa	Predicted RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	PAR32	Q12515	295 aa	Known RBP	4.83	□□□□□ -1.64
GGA1	YDR358W	CPA2	P03965	1118 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	REC107	P21651	314 aa		4.82	□□□□□ -1.64
GGA1	YDR358W	LRE1	P25579	583 aa	Known RBP	4.82	□□□□□ -1.64
GGA1	YDR358W	GCS1	P35197	352 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms