RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	RFC1	P38630	861 aa	Known RBP	0.93	□□□□□ -2.26
SEC1	YDR164C	YAP3	P38749	330 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	IES5	P40060	125 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	MAM1	P40065	302 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	AZF1	P41696	914 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	NIT2	P47016	307 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	PEX14	P53112	341 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	SVL3	Q03088	825 aa	Known RBP	0.93	□□□□□ -2.26
SEC1	YDR164C	VPS72	Q03388	795 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	VMS1	Q04311	632 aa	Known RBP	0.93	□□□□□ -2.26
SEC1	YDR164C	YCG1	Q06680	1035 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	GUD1	Q07729	489 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	TRE2	Q08693	809 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	KOG1	P38873	1557 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	RAD9	P14737	1309 aa		0.93	□□□□□ -2.26
SEC1	YDR164C	NUP157	P40064	1391 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	SPP41	P38904	1435 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	KAR1	P11927	433 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	SST2	P11972	698 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	SUI2	P20459	304 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	IME1	P21190	360 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	CBP3	P21560	335 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	TRX2	P22803	104 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	PRP19	P32523	503 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	MFT1	P33441	392 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	YHR033W	P38690	423 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	IMD2	P38697	523 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	LNP1	P38878	278 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	CKB2	P38930	258 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	PEA2	P40091	420 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	GPP2	P40106	250 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	PRM2	P40534	656 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	IMD3	P50095	523 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	MDG1	P53885	366 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	EAF7	P53911	425 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	DIG1	Q03063	452 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	ECM16	Q04217	1267 aa	Known RBP	0.92	□□□□□ -2.26
SEC1	YDR164C	ECI1	Q05871	280 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	YPS7	Q06325	596 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	YDL121C	Q07541	149 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	SMC4	Q12267	1418 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	POL1	P13382	1468 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	VPS15	P22219	1454 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	RKR1	Q04781	1562 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	BUD3	P25558	1636 aa		0.92	□□□□□ -2.26
SEC1	YDR164C	GAL1	P04385	528 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	RPS21A	P0C0V8	87 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	PGI1	P12709	554 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	YEF3	P16521	1044 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	APA1	P16550	321 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	AEP2	P22136	580 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	MAK32	P23060	363 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	PRP45	P28004	379 aa	Predicted RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	HSP104	P31539	908 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	DSS4	P32601	143 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	SER1	P33330	395 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	RRT2	P38332	387 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	PCA1	P38360	1216 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	TDA3	P38758	523 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	PCL6	P40038	420 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	GZF3	P42944	551 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	DUG1	P43616	481 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	SQS1	P53866	767 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	UBX4	P54730	416 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	ZDS2	P54786	942 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	MET14	Q02196	202 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	ECM9	Q02202	377 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	ATG16	Q03818	150 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	VPS64	Q03944	604 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	RAD33	Q04231	177 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YLR352W	Q06479	807 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	ARR3	Q06598	404 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	CTI6	Q08923	506 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YTM1	Q12024	460 aa	Predicted RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	NYV1	Q12255	253 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	KRE5	P22023	1365 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	TOP2	P06786	1428 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	SNQ2	P32568	1501 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	SWI6	P09959	803 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	HEM12	P32347	362 aa	Predicted RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	EBP2	P36049	427 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	CAB3	P36076	571 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	MRPL4	P36517	319 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SEC1	YDR164C	HXT6	P39003	570 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	HXT7	P39004	570 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YJR061W	P40355	935 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YJL070C	P40361	888 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YJL107C	P42947	387 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	QRI7	P43122	407 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SEC1	YDR164C	RET2	P43621	546 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	MNN11	P46985	422 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	YGR153W	P48238	217 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	SPC105	P53148	917 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	YGR021W	P53212	290 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	RRP46	P53256	223 aa	Predicted RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	NOP15	P53927	220 aa	Predicted RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	PHM6	Q05637	104 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	RTT109	Q07794	436 aa		0.91	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms