RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W PUS7Q08647 676 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W HRK1Q08732 759 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W RAX1Q08760 435 aa4.25□□□□□ -1.73
TRS85YDR108W AIM41Q12032 185 aa4.25□□□□□ -1.73
TRS85YDR108W SSF2Q12153 453 aaPredicted RBP4.25□□□□□ -1.73
TRS85YDR108W ZRT2Q12436 422 aa4.25□□□□□ -1.73
TRS85YDR108W ATP6P00854 259 aa4.25□□□□□ -1.73
TRS85YDR108W GPM1P00950 247 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W HMG2P12684 1045 aa4.25□□□□□ -1.73
TRS85YDR108W STE12P13574 688 aa4.25□□□□□ -1.73
TRS85YDR108W CWH43P25618 953 aa4.25□□□□□ -1.73
TRS85YDR108W CMK1P27466 446 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W FRD1P32614 470 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W NTR2P36118 322 aaPredicted RBP4.25□□□□□ -1.73
TRS85YDR108W PPS1P38148 807 aa4.25□□□□□ -1.73
TRS85YDR108W ECM21P38167 1117 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W YBL036CP38197 257 aa4.25□□□□□ -1.73
TRS85YDR108W YHL050CP38721 697 aa4.25□□□□□ -1.73
TRS85YDR108W RTC3P38804 111 aaPredicted RBP4.25□□□□□ -1.73
TRS85YDR108W GID8P40208 455 aa4.25□□□□□ -1.73
TRS85YDR108W YJL070CP40361 888 aa4.25□□□□□ -1.73
TRS85YDR108W IRC5P43610 853 aa4.25□□□□□ -1.73
TRS85YDR108W LSM1P47017 172 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W MSE1P48525 536 aa4.25□□□□□ -1.73
TRS85YDR108W DIE2P50076 525 aa4.25□□□□□ -1.73
TRS85YDR108W DSD1P53095 428 aa4.25□□□□□ -1.73
TRS85YDR108W YGL108CP53139 140 aa4.25□□□□□ -1.73
TRS85YDR108W MRPS35P53292 345 aa4.25□□□□□ -1.73
TRS85YDR108W DID2P69771 204 aa4.25□□□□□ -1.73
TRS85YDR108W RPL6AQ02326 176 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W YPL034WQ03083 165 aa4.25□□□□□ -1.73
TRS85YDR108W RSC58Q07979 502 aa4.25□□□□□ -1.73
TRS85YDR108W YAP7Q08182 245 aa4.25□□□□□ -1.73
TRS85YDR108W PGA3Q12746 312 aaKnown RBP4.25□□□□□ -1.73
TRS85YDR108W NUP192P47054 1683 aa4.24□□□□□ -1.73
TRS85YDR108W URA3P03962 267 aa4.24□□□□□ -1.73
TRS85YDR108W MRP2P10663 115 aaPredicted RBP4.24□□□□□ -1.73
TRS85YDR108W MRP13P12686 339 aa4.24□□□□□ -1.73
TRS85YDR108W ARG8P18544 423 aa4.24□□□□□ -1.73
TRS85YDR108W CKA2P19454 339 aa4.24□□□□□ -1.73
TRS85YDR108W PRP5P21372 849 aaPredicted RBP4.24□□□□□ -1.73
TRS85YDR108W RSC6P25632 483 aa4.24□□□□□ -1.73
TRS85YDR108W PEX3P28795 441 aa4.24□□□□□ -1.73
TRS85YDR108W HXT1P32465 570 aa4.24□□□□□ -1.73
TRS85YDR108W RAD24P32641 659 aa4.24□□□□□ -1.73
TRS85YDR108W PEX6P33760 1030 aa4.24□□□□□ -1.73
TRS85YDR108W NIC96P34077 839 aa4.24□□□□□ -1.73
TRS85YDR108W CCZ1P38273 704 aa4.24□□□□□ -1.73
TRS85YDR108W YHR219WP38900 624 aa4.24□□□□□ -1.73
TRS85YDR108W MXR1P40029 184 aa4.24□□□□□ -1.73
TRS85YDR108W VFA1P40080 203 aa4.24□□□□□ -1.73
TRS85YDR108W DPH1P40487 425 aaKnown RBP4.24□□□□□ -1.73
TRS85YDR108W QRI1P43123 477 aaKnown RBP4.24□□□□□ -1.73
TRS85YDR108W YGR153WP48238 217 aa4.24□□□□□ -1.73
TRS85YDR108W NIT3P49954 291 aa4.24□□□□□ -1.73
TRS85YDR108W USE1P53146 245 aa4.24□□□□□ -1.73
TRS85YDR108W ACS1Q01574 713 aa4.24□□□□□ -1.73
TRS85YDR108W SED5Q01590 340 aa4.24□□□□□ -1.73
TRS85YDR108W REC102Q02721 264 aa4.24□□□□□ -1.73
TRS85YDR108W SVL3Q03088 825 aaKnown RBP4.24□□□□□ -1.73
TRS85YDR108W SSY1Q03770 852 aa4.24□□□□□ -1.73
TRS85YDR108W YLR407WQ06070 228 aa4.24□□□□□ -1.73
TRS85YDR108W SWA2Q06677 668 aa4.24□□□□□ -1.73
TRS85YDR108W YPD1Q07688 167 aa4.24□□□□□ -1.73
TRS85YDR108W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
TRS85YDR108W RCN2Q12044 265 aa4.24□□□□□ -1.73
TRS85YDR108W FMP16Q12497 93 aa4.24□□□□□ -1.73
TRS85YDR108W SPO14P36126 1683 aa4.24□□□□□ -1.73
TRS85YDR108W HIS4P00815 799 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W CBP6P07253 162 aaPredicted RBP4.23□□□□□ -1.73
TRS85YDR108W GLK1P17709 500 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W PRP9P19736 530 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W ATP12P22135 325 aa4.23□□□□□ -1.73
TRS85YDR108W KRR1P25586 316 aaPredicted RBP4.23□□□□□ -1.73
TRS85YDR108W PMT2P31382 759 aa4.23□□□□□ -1.73
TRS85YDR108W DBF20P32328 564 aa4.23□□□□□ -1.73
TRS85YDR108W FBP26P32604 452 aa4.23□□□□□ -1.73
TRS85YDR108W TAF14P35189 244 aa4.23□□□□□ -1.73
TRS85YDR108W NUP133P36161 1157 aa4.23□□□□□ -1.73
TRS85YDR108W KTR4P38131 464 aa4.23□□□□□ -1.73
TRS85YDR108W ALG3P38179 458 aa4.23□□□□□ -1.73
TRS85YDR108W DIA4P38705 446 aaPredicted RBP4.23□□□□□ -1.73
TRS85YDR108W MIP6P38760 659 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W SBE22P38814 852 aa4.23□□□□□ -1.73
TRS85YDR108W NOP16P40007 231 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W ALA1P40825 983 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W VTC4P47075 721 aa4.23□□□□□ -1.73
TRS85YDR108W BIR1P47134 954 aa4.23□□□□□ -1.73
TRS85YDR108W RSM26P47141 266 aa4.23□□□□□ -1.73
TRS85YDR108W CAF40P53829 373 aa4.23□□□□□ -1.73
TRS85YDR108W ZDS2P54786 942 aa4.23□□□□□ -1.73
TRS85YDR108W SPO77Q06134 477 aa4.23□□□□□ -1.73
TRS85YDR108W NDE2Q07500 545 aa4.23□□□□□ -1.73
TRS85YDR108W ALE1Q08548 619 aa4.23□□□□□ -1.73
TRS85YDR108W MCD1Q12158 566 aa4.23□□□□□ -1.73
TRS85YDR108W ATG31Q12421 196 aa4.23□□□□□ -1.73
TRS85YDR108W BUD3P25558 1636 aa4.23□□□□□ -1.73
TRS85YDR108W PPR1P07272 904 aaPredicted RBP4.23□□□□□ -1.73
TRS85YDR108W LAT1P12695 482 aaKnown RBP4.23□□□□□ -1.73
TRS85YDR108W GAL3P13045 520 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms