RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	IDP3	P53982	420 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	ERG13	P54839	491 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	YOR389W	Q08912	624 aa		3.54	□□□□□ -1.84
PBP4	YDL053C	LYS21	Q12122	440 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	PGI1	P12709	554 aa	Known RBP	3.53	□□□□□ -1.84
PBP4	YDL053C	URK1	P27515	501 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	SWC3	P31376	625 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	ACA1	P39970	489 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	PUG1	P40100	303 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	RPT2	P40327	437 aa	Known RBP	3.53	□□□□□ -1.84
PBP4	YDL053C	YAT1	P80235	687 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	STP1	Q00947	519 aa		3.53	□□□□□ -1.84
PBP4	YDL053C	SNU56	Q03782	492 aa	Known RBP	3.53	□□□□□ -1.84
PBP4	YDL053C	COX1	P00401	534 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	ILV2	P07342	687 aa	Known RBP	3.52	□□□□□ -1.85
PBP4	YDL053C	YMR085W	P0CF18	432 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	CLB4	P24871	460 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	FSH1	P38777	243 aa	Known RBP	3.52	□□□□□ -1.85
PBP4	YDL053C	ERV46	P39727	415 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	FUN12	P39730	1002 aa	Known RBP	3.52	□□□□□ -1.85
PBP4	YDL053C	TPM2	P40414	161 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	UBP7	P40453	1071 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	CIN1	P40987	1014 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	IRC7	P43623	340 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	GTB1	Q04924	702 aa		3.52	□□□□□ -1.85
PBP4	YDL053C	RVB2	Q12464	471 aa	Known RBP	3.52	□□□□□ -1.85
PBP4	YDL053C	ILS1	P09436	1072 aa	Known RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	NCP1	P16603	691 aa	Known RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	MSM1	P22438	575 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	PTC6	P25646	442 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	LAC1	P28496	418 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	GSH1	P32477	678 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	GCD7	P32502	381 aa	Predicted RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	ECM32	P32644	1121 aa	Known RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	HES1	P35843	434 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	BUD16	P39988	312 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	SKP2	P42843	763 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	ZAP1	P47043	880 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	ARC35	P53731	342 aa	Known RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	MTG1	Q03151	367 aa	Predicted RBP	3.51	□□□□□ -1.85
PBP4	YDL053C	TRS130	Q03660	1102 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	CIA1	Q05583	330 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	STP3	Q05937	343 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	CRC1	Q12289	327 aa		3.51	□□□□□ -1.85
PBP4	YDL053C	YAP1	P19880	650 aa	Known RBP	3.5	□□□□□ -1.85
PBP4	YDL053C	YCL049C	P25577	312 aa		3.5	□□□□□ -1.85
PBP4	YDL053C	ERR3	P42222	437 aa		3.5	□□□□□ -1.85
PBP4	YDL053C	UBX6	P47049	396 aa		3.5	□□□□□ -1.85
PBP4	YDL053C	GLO1	P50107	326 aa		3.5	□□□□□ -1.85
PBP4	YDL053C	LEA1	Q08963	238 aa	Predicted RBP	3.5	□□□□□ -1.85
PBP4	YDL053C	COQ3	P27680	312 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	TMT1	P32643	299 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	FAF1	P40546	346 aa	Predicted RBP	3.49	□□□□□ -1.85
PBP4	YDL053C	YRB30	P53107	440 aa	Predicted RBP	3.49	□□□□□ -1.85
PBP4	YDL053C	COP1	P53622	1201 aa	Known RBP	3.49	□□□□□ -1.85
PBP4	YDL053C	YDR109C	Q04585	715 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	VAM6	Q07468	1049 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	THI3	Q07471	609 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	PFA4	Q12006	378 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	GET3	Q12154	354 aa	Known RBP	3.49	□□□□□ -1.85
PBP4	YDL053C	RGT2	Q12300	763 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	ICT1	Q12385	394 aa		3.49	□□□□□ -1.85
PBP4	YDL053C	RFA2	P26754	273 aa	Known RBP	3.48	□□□□□ -1.85
PBP4	YDL053C	DBF20	P32328	564 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	PSF2	P40359	213 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	YIL024C	P40543	189 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	GAT1	P43574	510 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	MSY1	P48527	492 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	YPR003C	P53394	754 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	BLS1	Q06071	122 aa		3.48	□□□□□ -1.85
PBP4	YDL053C	GAL4	P04386	881 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	YML003W	P0CF16	290 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	LRE1	P25579	583 aa	Known RBP	3.47	□□□□□ -1.85
PBP4	YDL053C	EXO84	P38261	753 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	JHD1	P40034	492 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	MNT3	P40549	630 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	DJP1	P40564	432 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	SNM1	P40993	198 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	ORC5	P50874	479 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	ATG23	Q06671	453 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	YAP7	Q08182	245 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	BAG7	Q12128	409 aa		3.47	□□□□□ -1.85
PBP4	YDL053C	NUC1	P08466	329 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	YER190C-B	P0CX94	160 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	YEL077W-A	P0CX95	160 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	YGR296C-B	P0CX96	160 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	YPL283W-B	P0CX97	160 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	YPR204C-A	P0CX98	160 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	MTF2	P10849	440 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	PCT1	P13259	424 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	MSS51	P32335	436 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	PTH2	P34222	208 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	GEX2	P36173	615 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	MRPL36	P36531	177 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	IFA38	P38286	347 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	NPR3	P38742	1146 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	PHM8	P40025	321 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	CFD1	P40558	293 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	CDC1	P40986	491 aa		3.46	□□□□□ -1.86
PBP4	YDL053C	ADE16	P54113	591 aa	Known RBP	3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms