RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W ENT1Q12518 454 aa4.68□□□□□ -1.66
VHC1YBR235W IML1P47170 1584 aa4.68□□□□□ -1.66
VHC1YBR235W RPS19AP07280 144 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W RPS19BP07281 144 aaPredicted RBP4.68□□□□□ -1.66
VHC1YBR235W HOM3P10869 527 aa4.68□□□□□ -1.66
VHC1YBR235W SEC1P30619 724 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W SDS22P36047 338 aa4.68□□□□□ -1.66
VHC1YBR235W NTR2P36118 322 aaPredicted RBP4.68□□□□□ -1.66
VHC1YBR235W MCM7P38132 845 aa4.68□□□□□ -1.66
VHC1YBR235W PBP2P38151 413 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
VHC1YBR235W MSS4P38994 779 aa4.68□□□□□ -1.66
VHC1YBR235W TIR3P40552 269 aa4.68□□□□□ -1.66
VHC1YBR235W FET5P43561 622 aa4.68□□□□□ -1.66
VHC1YBR235W ACF4P47129 309 aa4.68□□□□□ -1.66
VHC1YBR235W FOL2P51601 243 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W YGR026WP53217 278 aa4.68□□□□□ -1.66
VHC1YBR235W HOL1P53389 586 aa4.68□□□□□ -1.66
VHC1YBR235W COG5P53951 403 aa4.68□□□□□ -1.66
VHC1YBR235W EBS1Q03466 884 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W YMR027WQ04371 470 aa4.68□□□□□ -1.66
VHC1YBR235W SPH1Q06160 661 aa4.68□□□□□ -1.66
VHC1YBR235W PSR2Q07949 397 aa4.68□□□□□ -1.66
VHC1YBR235W YOL075CQ08234 1294 aa4.68□□□□□ -1.66
VHC1YBR235W SKI7Q08491 747 aaPredicted RBP4.68□□□□□ -1.66
VHC1YBR235W AEP3Q12089 606 aa4.68□□□□□ -1.66
VHC1YBR235W YOR111WQ99210 232 aa4.68□□□□□ -1.66
VHC1YBR235W HMG2P12684 1045 aa4.68□□□□□ -1.66
VHC1YBR235W PHO81P17442 1178 aa4.68□□□□□ -1.66
VHC1YBR235W NPP1P25353 742 aa4.68□□□□□ -1.66
VHC1YBR235W NAM9P27929 486 aa4.68□□□□□ -1.66
VHC1YBR235W PET127P32606 800 aa4.68□□□□□ -1.66
VHC1YBR235W ORC2P32833 620 aa4.68□□□□□ -1.66
VHC1YBR235W CCL1P37366 393 aa4.68□□□□□ -1.66
VHC1YBR235W RIM11P38615 370 aa4.68□□□□□ -1.66
VHC1YBR235W EMP65P40085 556 aa4.68□□□□□ -1.66
VHC1YBR235W YMR134WP40207 237 aa4.68□□□□□ -1.66
VHC1YBR235W IMA5P40884 581 aa4.68□□□□□ -1.66
VHC1YBR235W CIN1P40987 1014 aa4.68□□□□□ -1.66
VHC1YBR235W ALR2P43553 858 aa4.68□□□□□ -1.66
VHC1YBR235W CAF16P43569 289 aa4.68□□□□□ -1.66
VHC1YBR235W GUS1P46655 708 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
VHC1YBR235W MNT2P53059 558 aa4.68□□□□□ -1.66
VHC1YBR235W RAI1P53063 387 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W GIM3P53900 129 aa4.68□□□□□ -1.66
VHC1YBR235W YMR279CQ03263 540 aa4.68□□□□□ -1.66
VHC1YBR235W UTP14Q04500 899 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W KAP95Q06142 861 aaKnown RBP4.68□□□□□ -1.66
VHC1YBR235W GLO4Q12320 285 aa4.68□□□□□ -1.66
VHC1YBR235W HOP09932 586 aa4.67□□□□□ -1.66
VHC1YBR235W MRP2P10663 115 aaPredicted RBP4.67□□□□□ -1.66
VHC1YBR235W YSP3P25036 478 aa4.67□□□□□ -1.66
VHC1YBR235W IMP2'P32351 346 aa4.67□□□□□ -1.66
VHC1YBR235W CPR5P35176 225 aa4.67□□□□□ -1.66
VHC1YBR235W PRS2P38620 318 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W LEU5P38702 357 aa4.67□□□□□ -1.66
VHC1YBR235W RIM4P38741 713 aa4.67□□□□□ -1.66
VHC1YBR235W ORC6P38826 435 aa4.67□□□□□ -1.66
VHC1YBR235W SET5P38890 526 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W MAM33P40513 266 aa4.67□□□□□ -1.66
VHC1YBR235W ASE1P50275 885 aa4.67□□□□□ -1.66
VHC1YBR235W YNR068CP53754 272 aa4.67□□□□□ -1.66
VHC1YBR235W RPL6AQ02326 176 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W RAD30Q04049 632 aa4.67□□□□□ -1.66
VHC1YBR235W URC2Q04411 772 aa4.67□□□□□ -1.66
VHC1YBR235W RQC1Q05468 723 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W CST9Q06032 482 aa4.67□□□□□ -1.66
VHC1YBR235W ESF1Q06344 628 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W THI3Q07471 609 aa4.67□□□□□ -1.66
VHC1YBR235W ALE1Q08548 619 aa4.67□□□□□ -1.66
VHC1YBR235W FLC1Q08967 793 aa4.67□□□□□ -1.66
VHC1YBR235W ARP7Q12406 477 aa4.67□□□□□ -1.66
VHC1YBR235W SAR1P20606 190 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W PPQ1P32945 549 aa4.67□□□□□ -1.66
VHC1YBR235W ETR1P38071 380 aa4.67□□□□□ -1.66
VHC1YBR235W ARA1P38115 344 aa4.67□□□□□ -1.66
VHC1YBR235W CDS1P38221 457 aa4.67□□□□□ -1.66
VHC1YBR235W SOH1P38633 127 aa4.67□□□□□ -1.66
VHC1YBR235W SRP72P38688 640 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W YHL017WP38745 532 aa4.67□□□□□ -1.66
VHC1YBR235W SEO1P39709 593 aa4.67□□□□□ -1.66
VHC1YBR235W YFL034WP43564 1073 aa4.67□□□□□ -1.66
VHC1YBR235W LOC1P43586 204 aaPredicted RBP4.67□□□□□ -1.66
VHC1YBR235W IDS2P46958 469 aa4.67□□□□□ -1.66
VHC1YBR235W TIM54P47045 478 aa4.67□□□□□ -1.66
VHC1YBR235W YKE2P52553 114 aa4.67□□□□□ -1.66
VHC1YBR235W ARC35P53731 342 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W YNL193WP53870 558 aa4.67□□□□□ -1.66
VHC1YBR235W ARL3Q02804 198 aa4.67□□□□□ -1.66
VHC1YBR235W YPL034WQ03083 165 aa4.67□□□□□ -1.66
VHC1YBR235W RUB1Q03919 77 aa4.67□□□□□ -1.66
VHC1YBR235W DUS3Q06053 668 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W ASA1Q06822 443 aa4.67□□□□□ -1.66
VHC1YBR235W YPR204WQ08995 1032 aa4.67□□□□□ -1.66
VHC1YBR235W ARG3P05150 338 aa4.67□□□□□ -1.66
VHC1YBR235W ILV2P07342 687 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W TIF1P10081 395 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W RIT1P23796 513 aa4.67□□□□□ -1.66
VHC1YBR235W SRO9P25567 434 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W CCR4P31384 837 aaKnown RBP4.67□□□□□ -1.66
VHC1YBR235W YBR032WP38223 100 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms