RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C CRF1Q04930 467 aa4.7□□□□□ -1.66
NPL4YBR170C PSK2Q08217 1101 aa4.7□□□□□ -1.66
NPL4YBR170C NUS1Q12063 375 aa4.7□□□□□ -1.66
NPL4YBR170C SFI1Q12369 946 aa4.7□□□□□ -1.66
NPL4YBR170C PDX1P16451 410 aa4.69□□□□□ -1.66
NPL4YBR170C NTH1P32356 751 aa4.69□□□□□ -1.66
NPL4YBR170C ECM32P32644 1121 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C ALY1P36117 915 aa4.69□□□□□ -1.66
NPL4YBR170C MRPL7P36519 292 aa4.69□□□□□ -1.66
NPL4YBR170C YBL029WP38201 376 aa4.69□□□□□ -1.66
NPL4YBR170C SRP72P38688 640 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C APE4P38821 490 aa4.69□□□□□ -1.66
NPL4YBR170C ELO3P40319 345 aa4.69□□□□□ -1.66
NPL4YBR170C PAN2P53010 1115 aaPredicted RBP4.69□□□□□ -1.66
NPL4YBR170C MTG1Q03151 367 aaPredicted RBP4.69□□□□□ -1.66
NPL4YBR170C ARP9Q05123 467 aa4.69□□□□□ -1.66
NPL4YBR170C ERG27Q12452 347 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C NOP58Q12499 511 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C SMC6Q12749 1114 aa4.69□□□□□ -1.66
NPL4YBR170C MET3P08536 511 aa4.69□□□□□ -1.66
NPL4YBR170C KAR3P17119 729 aa4.69□□□□□ -1.66
NPL4YBR170C PRE8P23639 250 aa4.69□□□□□ -1.66
NPL4YBR170C PIL1P53252 339 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C YNR061CP53747 219 aa4.69□□□□□ -1.66
NPL4YBR170C INN1P53901 409 aa4.69□□□□□ -1.66
NPL4YBR170C ERO1Q03103 563 aa4.69□□□□□ -1.66
NPL4YBR170C EFR3Q03653 782 aaKnown RBP4.69□□□□□ -1.66
NPL4YBR170C IRC13Q08630 104 aa4.69□□□□□ -1.66
NPL4YBR170C RCN2Q12044 265 aa4.69□□□□□ -1.66
NPL4YBR170C RTN2Q12443 393 aa4.69□□□□□ -1.66
NPL4YBR170C HCM1P25364 564 aa4.68□□□□□ -1.66
NPL4YBR170C CDC60P26637 1090 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C CAP1P28495 268 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C CTP1P38152 299 aa4.68□□□□□ -1.66
NPL4YBR170C LRP1P38801 184 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C SLZ1P40167 298 aa4.68□□□□□ -1.66
NPL4YBR170C PFK26P40433 827 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C YIL161WP40449 235 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C UBP7P40453 1071 aa4.68□□□□□ -1.66
NPL4YBR170C MUB1Q03162 620 aa4.68□□□□□ -1.66
NPL4YBR170C NGL2Q03264 515 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C RIX7Q07844 837 aaKnown RBP4.68□□□□□ -1.66
NPL4YBR170C YKL033W-AQ86ZR7 236 aa4.68□□□□□ -1.66
NPL4YBR170C SIR3P06701 978 aa4.67□□□□□ -1.66
NPL4YBR170C LCB1P25045 558 aaKnown RBP4.67□□□□□ -1.66
NPL4YBR170C OCA4P25366 362 aa4.67□□□□□ -1.66
NPL4YBR170C PEP3P27801 918 aa4.67□□□□□ -1.66
NPL4YBR170C EFT1P32324 842 aaKnown RBP4.67□□□□□ -1.66
NPL4YBR170C PHO11P35842 467 aa4.67□□□□□ -1.66
NPL4YBR170C PHO12P38693 467 aa4.67□□□□□ -1.66
NPL4YBR170C BUL1P48524 976 aa4.67□□□□□ -1.66
NPL4YBR170C FHN1P53279 174 aa4.67□□□□□ -1.66
NPL4YBR170C YML122CQ03207 126 aa4.67□□□□□ -1.66
NPL4YBR170C FRE5Q08908 694 aa4.67□□□□□ -1.66
NPL4YBR170C CBS1P14066 229 aa4.66□□□□□ -1.66
NPL4YBR170C DBF4P32325 704 aa4.66□□□□□ -1.66
NPL4YBR170C ELF1P36053 145 aa4.66□□□□□ -1.66
NPL4YBR170C KTR3P38130 404 aaPredicted RBP4.66□□□□□ -1.66
NPL4YBR170C SDH8P38345 138 aa4.66□□□□□ -1.66
NPL4YBR170C RTS1P38903 757 aa4.66□□□□□ -1.66
NPL4YBR170C REV7P38927 245 aa4.66□□□□□ -1.66
NPL4YBR170C YJL206CP39529 758 aa4.66□□□□□ -1.66
NPL4YBR170C YJL163CP46996 555 aa4.66□□□□□ -1.66
NPL4YBR170C USA1Q03714 838 aa4.66□□□□□ -1.66
NPL4YBR170C YDR131CQ03899 556 aa4.66□□□□□ -1.66
NPL4YBR170C TMA10Q06177 86 aa4.66□□□□□ -1.66
NPL4YBR170C MLH3Q12083 715 aa4.66□□□□□ -1.66
NPL4YBR170C SWT1Q12104 458 aa4.66□□□□□ -1.66
NPL4YBR170C PRS5Q12265 496 aaKnown RBP4.66□□□□□ -1.66
NPL4YBR170C TRM13Q12383 476 aa4.66□□□□□ -1.66
NPL4YBR170C CET1O13297 549 aaPredicted RBP4.66□□□□□ -1.66
NPL4YBR170C YML003WP0CF16 290 aa4.66□□□□□ -1.66
NPL4YBR170C FUB1P25659 250 aa4.66□□□□□ -1.66
NPL4YBR170C SRO77P38163 1010 aa4.66□□□□□ -1.66
NPL4YBR170C UBP13P38187 747 aa4.66□□□□□ -1.66
NPL4YBR170C JHD1P40034 492 aa4.66□□□□□ -1.66
NPL4YBR170C IMO32P53219 342 aa4.66□□□□□ -1.66
NPL4YBR170C ZDS2P54786 942 aa4.66□□□□□ -1.66
NPL4YBR170C GET3Q12154 354 aaKnown RBP4.66□□□□□ -1.66
NPL4YBR170C GRX6Q12438 231 aa4.66□□□□□ -1.66
NPL4YBR170C YBR255C-AQ3E776 120 aa4.66□□□□□ -1.66
NPL4YBR170C YOR019WQ99248 730 aa4.66□□□□□ -1.66
NPL4YBR170C THR1P17423 357 aaKnown RBP4.65□□□□□ -1.67
NPL4YBR170C LRE1P25579 583 aaKnown RBP4.65□□□□□ -1.67
NPL4YBR170C HIS7P33734 552 aaKnown RBP4.65□□□□□ -1.67
NPL4YBR170C ARO9P38840 513 aaPredicted RBP4.65□□□□□ -1.67
NPL4YBR170C RGI2P40188 164 aa4.65□□□□□ -1.67
NPL4YBR170C GLO1P50107 326 aa4.65□□□□□ -1.67
NPL4YBR170C SLI1P53304 468 aa4.65□□□□□ -1.67
NPL4YBR170C GTB1Q04924 702 aa4.65□□□□□ -1.67
NPL4YBR170C ATG23Q06671 453 aa4.65□□□□□ -1.67
NPL4YBR170C ILS1P09436 1072 aaKnown RBP4.64□□□□□ -1.67
NPL4YBR170C STE11P23561 717 aa4.64□□□□□ -1.67
NPL4YBR170C POL4P25615 582 aa4.64□□□□□ -1.67
NPL4YBR170C VPH1P32563 840 aaKnown RBP4.64□□□□□ -1.67
NPL4YBR170C YHR097CP38809 366 aaKnown RBP4.64□□□□□ -1.67
NPL4YBR170C YEL057CP39983 233 aa4.64□□□□□ -1.67
NPL4YBR170C FMP52P40008 231 aa4.64□□□□□ -1.67
NPL4YBR170C MNN10P50108 393 aaKnown RBP4.64□□□□□ -1.67
NPL4YBR170C SUN4P53616 420 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms