RNA–Protein interactions for RNA: ENST00000561831.7

TCF4-210, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-210ENST00000561831 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
TCF4-210ENST00000561831 KCNQ2O43526 872 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 GRIN1Q05586 938 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 PTPN14Q15678 1187 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 TMC6Q7Z403 805 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 ENAHQ8N8S7 591 aaPredicted RBP12.14□□□□□ -0.47
TCF4-210ENST00000561831 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
TCF4-210ENST00000561831 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
TCF4-210ENST00000561831 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
TCF4-210ENST00000561831 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 KIF2AO00139 706 aaPredicted RBP12.13□□□□□ -0.47
TCF4-210ENST00000561831 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
TCF4-210ENST00000561831 NR5A1Q13285 461 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
TCF4-210ENST00000561831 TMED8Q6PL24 325 aaPredicted RBP12.13□□□□□ -0.47
TCF4-210ENST00000561831 SPATA20Q8TB22 786 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 PHF20Q9BVI0 1012 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 CEP131Q9UPN4 1083 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
TCF4-210ENST00000561831 PCDHB6Q9Y5E3 794 aa12.13□□□□□ -0.47
TCF4-210ENST00000561831 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 FOXN1O15353 648 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 CBFA2T2O43439 604 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 NCBP1Q09161 790 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 TROAPQ12815 778 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 OLFM4Q6UX06 510 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 CCDC112Q8NEF3 446 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
TCF4-210ENST00000561831 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
TCF4-210ENST00000561831 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
TCF4-210ENST00000561831 ORC4O43929 436 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 CALM1P0DP23 149 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 CALM2P0DP24 149 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 CALM3P0DP25 149 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 SFPQP23246 707 aaKnown RBP eCLIP12.11□□□□□ -0.47
TCF4-210ENST00000561831 PDE4BQ07343 736 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 MORC3Q14149 939 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 POSTNQ15063 836 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 DPF2Q92785 391 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 TNFRSF25Q93038 417 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
TCF4-210ENST00000561831 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 A0A0G2JS52 829 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 DDAH1O94760 285 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 TUBB4AP04350 444 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 UBASH3AP57075 661 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 NPY5RQ15761 445 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
TCF4-210ENST00000561831 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 AATFQ9NY61 560 aaKnown RBP eCLIP12.11□□□□□ -0.47
TCF4-210ENST00000561831 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
TCF4-210ENST00000561831 DLEC1Q9Y238 1755 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 IRS2Q9Y4H2 1338 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 POLR2DO15514 142 aaKnown RBP12.1□□□□□ -0.47
TCF4-210ENST00000561831 IGSF3O75054 1194 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 ZNF18P17022 549 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 XBP1P17861 261 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 SBK1Q52WX2 424 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
TCF4-210ENST00000561831 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 ENOX1Q8TC92 643 aaKnown RBP12.1□□□□□ -0.47
TCF4-210ENST00000561831 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 NARFQ9UHQ1 456 aa12.1□□□□□ -0.47
TCF4-210ENST00000561831 COL24A1Q17RW2 1714 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 TRIM75PA6NK02 468 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 KRT2P35908 639 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
TCF4-210ENST00000561831 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
TCF4-210ENST00000561831 EARS2Q5JPH6 523 aaKnown RBP12.09□□□□□ -0.47
TCF4-210ENST00000561831 CT47A1Q5JQC4 288 aaPredicted RBP12.09□□□□□ -0.47
TCF4-210ENST00000561831 IQCA1Q86XH1 822 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
TCF4-210ENST00000561831 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms