RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
TTC8-208ENST00000553718 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
TTC8-208ENST00000553718 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
TTC8-208ENST00000553718 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
TTC8-208ENST00000553718 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
TTC8-208ENST00000553718 KCND1Q9NSA2 647 aa12.38□□□□□ -0.43
TTC8-208ENST00000553718 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
TTC8-208ENST00000553718 COL4A1P02462 1669 aa12.38□□□□□ -0.43
TTC8-208ENST00000553718 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
TTC8-208ENST00000553718 RXRAP19793 462 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 NFIXQ14938 502 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 KRBA2Q6ZNG9 492 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 C11orf57Q6ZUT1 292 aaPredicted RBP12.37□□□□□ -0.43
TTC8-208ENST00000553718 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 UPF1Q92900 1129 aaKnown RBP eCLIP12.37□□□□□ -0.43
TTC8-208ENST00000553718 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
TTC8-208ENST00000553718 AIFM3Q96NN9 605 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 ZNF287Q9HBT7 754 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 GJB4Q9NTQ9 266 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
TTC8-208ENST00000553718 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
TTC8-208ENST00000553718 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 BTBD18B2RXH4 712 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 PLCG2P16885 1265 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 KIF5BP33176 963 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 KRT2P35908 639 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 ST5P78524 1137 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 PKN1Q16512 942 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 TMTC3Q6ZXV5 915 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 CCDC144CPQ8IYA2 1237 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 CNBD1Q8NA66 436 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
TTC8-208ENST00000553718 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 DACH1Q9UI36 760 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
TTC8-208ENST00000553718 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
TTC8-208ENST00000553718 DYNC1I1O14576 645 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 TUBB4AP04350 444 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 IL1R1P14778 569 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 SMARCA1P28370 1054 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 MARCKSP29966 332 aaPredicted RBP12.35□□□□□ -0.43
TTC8-208ENST00000553718 KCNJ6P48051 423 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
TTC8-208ENST00000553718 C12orf60Q5U649 245 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
TTC8-208ENST00000553718 TBC1D22AQ8WUA7 517 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 LZTS2Q9BRK4 669 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
TTC8-208ENST00000553718 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 R3HCC1Q9Y3T6 440 aaKnown RBP12.35□□□□□ -0.43
TTC8-208ENST00000553718 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
TTC8-208ENST00000553718 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 CALML3P27482 149 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 PRDX5P30044 214 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
TTC8-208ENST00000553718 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
TTC8-208ENST00000553718 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
TTC8-208ENST00000553718 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
TTC8-208ENST00000553718 MYH13Q9UKX3 1938 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 NPHP1O15259 732 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
TTC8-208ENST00000553718 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
TTC8-208ENST00000553718 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 AOPEPQ8N6M6 819 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 MLKLQ8NB16 471 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
TTC8-208ENST00000553718 RPGRQ92834 1020 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms