RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	OTUD7B	Q6GQQ9	843 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	TMC4	Q7Z404	712 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	NBPF11	Q86T75	865 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	PHKB	Q93100	1093 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	TRIM5	Q9C035	493 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	HPSE	Q9Y251	543 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	TNKS	O95271	1327 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	XDH	P47989	1333 aa		11.78	□□□□□ -0.52
PGAP2-231	ENST00000528216	PRPF3	O43395	683 aa	Known RBP	11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	TM4SF1	P30408	202 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	SYK	P43405	635 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	IFIT1B	Q5T764	474 aa	Known RBP	11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	RESP18	Q5W5W9	173 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	ZNF804A	Q7Z570	1209 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	AMOTL1	Q8IY63	956 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	BRMS1	Q9HCU9	246 aa		11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.77	□□□□□ -0.52
PGAP2-231	ENST00000528216	IRS2	Q9Y4H2	1338 aa		11.77	□□□□□ -0.53
PGAP2-231	ENST00000528216	MYH6	P13533	1939 aa		11.77	□□□□□ -0.53
PGAP2-231	ENST00000528216	NPHP1	O15259	732 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	PFKFB1	P16118	471 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	NLRP12	P59046	1061 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	MECOM	Q03112	1051 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	KANK3	Q6NY19	840 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	ADGRA1	Q86SQ6	560 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	KRI1	Q8N9T8	703 aa	Known RBP	11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	CNBD1	Q8NA66	436 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	PRIMPOL	Q96LW4	560 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	SENP2	Q9HC62	589 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	TACC3	Q9Y6A5	838 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	TAF1	P21675	1872 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216		A0A1B0GVL5	298 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	IKBKB	O14920	756 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	BAG3	O95817	575 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	MMP10	P09238	476 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	CTR9	Q6PD62	1173 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	RAB11FIP4	Q86YS3	637 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	DIS3L2	Q8IYB7	885 aa	Known RBP	11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	ENAH	Q8N8S7	591 aa	Predicted RBP	11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	SDR42E1	Q8WUS8	393 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	ROBO3	Q96MS0	1386 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	ZNF287	Q9HBT7	754 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	FAM13B	Q9NYF5	915 aa		11.76	□□□□□ -0.53
PGAP2-231	ENST00000528216	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	AP5Z1	O43299	807 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	KIF5B	P33176	963 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	PPP4C	P60510	307 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	ST5	P78524	1137 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	DZIP1	Q86YF9	867 aa	Known RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	SLF2	Q8IX21	1173 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	DRC7	Q8IY82	874 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	KIAA1524	Q8TCG1	905 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	ANKS1A	Q92625	1134 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	IMPACT	Q9P2X3	320 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	TUBE1	Q9UJT0	475 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	PARP3	Q9Y6F1	533 aa		11.75	□□□□□ -0.53
PGAP2-231	ENST00000528216	USP17L12	C9JPN9	530 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	USP17L21	D6R901	530 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	LDHB	P07195	334 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	PLCG2	P16885	1265 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	RXRA	P19793	462 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	PTPRE	P23469	700 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	ATP2B4	P23634	1241 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	PTGER2	P43116	358 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	GNAQ	P50148	359 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	GSDMD	P57764	484 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	NFIX	Q14938	502 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	CCDC144CP	Q8IYA2	1237 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	CTCFL	Q8NI51	663 aa	Predicted RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	NKX2-3	Q8TAU0	364 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	PYM1	Q9BRP8	204 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	MYL10	Q9BUA6	226 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	CLIP2	Q9UDT6	1046 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	QSER1	Q2KHR3	1735 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	PPFIA3	O75145	1194 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	BBOX1	O75936	387 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	KRT2	P35908	639 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	TRAPPC10	P48553	1259 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	DYNLL1	P63167	89 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	TROAP	Q12815	778 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	CRY2	Q49AN0	593 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	DGKH	Q86XP1	1220 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	DHX40	Q8IX18	779 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	TRIML1	Q8N9V2	468 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	ZNF384	Q8TF68	577 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	NUP133	Q8WUM0	1156 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	RBM17	Q96I25	401 aa	Known RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	AIFM3	Q96NN9	605 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	TTC12	Q9H892	705 aa	Predicted RBP	11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	INCENP	Q9NQS7	918 aa		11.74	□□□□□ -0.53
PGAP2-231	ENST00000528216	MYH2	Q9UKX2	1941 aa		11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	WDHD1	O75717	1129 aa	Predicted RBP	11.73	□□□□□ -0.53
PGAP2-231	ENST00000528216	FUT2	Q10981	343 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms