RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 MECOMQ03112 1051 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 DHX40Q8IX18 779 aaKnown RBP11.14□□□□□ -0.63
CSF1R-203ENST00000504875 GRAMD1CQ8IYS0 662 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 SAP30BPQ9UHR5 308 aaKnown RBP11.14□□□□□ -0.63
CSF1R-203ENST00000504875 PCDHB6Q9Y5E3 794 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 TJP1Q07157 1748 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 FBXL16Q8N461 479 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 SERTAD1Q9UHV2 236 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 PCDHA5Q9Y5H7 936 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 GSDMDP57764 484 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 STAMQ92783 540 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 MRFAP1L1Q96HT8 127 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 C6orf229H3BNL8 230 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 NEMFO60524 1076 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 FANCCQ00597 558 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 MYL5Q02045 173 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 AXDND1Q5T1B0 1012 aaPredicted RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
CSF1R-203ENST00000504875 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
CSF1R-203ENST00000504875 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 VWA3AA6NCI4 1184 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 CBFA2T2O43439 604 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 PPP6R2O75170 966 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 STX17P56962 302 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 NTRK3Q16288 839 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
CSF1R-203ENST00000504875 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
CSF1R-203ENST00000504875 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
CSF1R-203ENST00000504875 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
CSF1R-203ENST00000504875 FOXN1O15353 648 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 VAT1LQ9HCJ6 419 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 GLI3P10071 1580 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 MCM7P33993 719 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 NARFQ9UHQ1 456 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 DACH1Q9UI36 760 aa11.12□□□□□ -0.63
CSF1R-203ENST00000504875 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TSPY3P0CV98 308 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TSPY8P0CW00 308 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TFAP4Q01664 338 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 V9GYY5 206 aaPredicted RBP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 BAG3O95817 575 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 CALM1P0DP23 149 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 CALM2P0DP24 149 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 CALM3P0DP25 149 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 GRIN1Q05586 938 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 POSTNQ15063 836 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
CSF1R-203ENST00000504875 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 TMX1Q9H3N1 280 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 FANCLQ9NW38 375 aa11.11□□□□□ -0.63
CSF1R-203ENST00000504875 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 UFL1O94874 794 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 KIF5BP33176 963 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
CSF1R-203ENST00000504875 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
CSF1R-203ENST00000504875 ITGB4P16144 1822 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 GOLGA8DPQ0D2H9 430 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
CSF1R-203ENST00000504875 TXLNAP40222 546 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms