RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MBIPQ9NS73 344 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 PCDHGC4Q9Y5F7 938 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 CHL1O00533 1208 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 EFSO43281 561 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 WIPF1O43516 503 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
CDHR3-213ENST00000488386 TNP2Q05952 138 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 TYRO3Q06418 890 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 C16orf46Q6P387 395 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 FIGNL1Q6PIW4 674 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 TPTE2Q6XPS3 522 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 COPS6Q7L5N1 327 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 SYNE4Q8N205 404 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 TRERF1Q96PN7 1200 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 CHPF2Q9P2E5 772 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 DMGDHQ9UI17 866 aaKnown RBP7.68□□□□□ -1.18
CDHR3-213ENST00000488386 ANKRD36CQ5JPF3 1778 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 TAF1P21675 1872 aa7.68□□□□□ -1.18
CDHR3-213ENST00000488386 LAMB2P55268 1798 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 ERVV-1B6SEH8 477 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 TGFBR3LH3BV60 316 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 KHNYNO15037 678 aaKnown RBP7.67□□□□□ -1.18
CDHR3-213ENST00000488386 NTSR2O95665 410 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 LMNB1P20700 586 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 GRNP28799 593 aaKnown RBP7.67□□□□□ -1.18
CDHR3-213ENST00000488386 ZEB1P37275 1124 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-213ENST00000488386 HTRA3P83110 453 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 STYK1Q6J9G0 422 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 ZNF34Q8IZ26 560 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 CFHR5Q9BXR6 569 aa7.67□□□□□ -1.18
CDHR3-213ENST00000488386 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-213ENST00000488386 DICER1Q9UPY3 1922 aaKnown RBP7.67□□□□□ -1.18
CDHR3-213ENST00000488386 C2CD2LO14523 706 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 NPR1P16066 1061 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 CD33P20138 364 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 FGFR3P22607 806 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-213ENST00000488386 CTBSQ01459 385 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 DUSP27Q5VZP5 1158 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 FOXR1Q6PIV2 292 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 BTLAQ7Z6A9 289 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 ETFBKMTQ8IXQ9 262 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 TSR2Q969E8 191 aaKnown RBP7.66□□□□□ -1.18
CDHR3-213ENST00000488386 TAOK3Q9H2K8 898 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 MRS2Q9HD23 443 aa7.66□□□□□ -1.18
CDHR3-213ENST00000488386 ZNF277Q9NRM2 450 aaPredicted RBP7.66□□□□□ -1.18
CDHR3-213ENST00000488386 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 COL4A1P02462 1669 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 HSPA6P17066 643 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 COL4A5P29400 1685 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 IER5Q5VY09 327 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 TSPYL6Q8N831 410 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 JARID2Q92833 1246 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 PHAXQ9H814 394 aaKnown RBP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 NEUROD4Q9HD90 331 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 DDX21Q9NR30 783 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDHR3-213ENST00000488386 BABAM1Q9NWV8 329 aa7.65□□□□□ -1.18
CDHR3-213ENST00000488386 DDX60Q8IY21 1712 aaKnown RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 KDM2BQ8NHM5 1336 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 ZNF541Q9H0D2 1346 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 GLTPD2A6NH11 291 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 ANP32CO43423 234 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 TOMM70O94826 608 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 DDNO94850 711 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 MX2P20592 715 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 CCDC93Q567U6 631 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 NLRP10Q86W26 655 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 C16orf71Q8IYS4 520 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 GTF3C2Q8WUA4 911 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 RPGRQ92834 1020 aaKnown RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 CEP63Q96MT8 703 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 UTP14AQ9BVJ6 771 aaKnown RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 NYXQ9GZU5 481 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 BRD7Q9NPI1 651 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 ANKIB1Q9P2G1 1089 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
CDHR3-213ENST00000488386 DNMT3AQ9Y6K1 912 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-213ENST00000488386 ZBTB39O15060 712 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 SERPINB4P48594 390 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 IDH3AP50213 366 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 TCIRG1Q13488 830 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 CRY2Q49AN0 593 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 PPP1R42Q7Z4L9 355 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 TREML1Q86YW5 311 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 FAM9BQ8IZU0 186 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 IFT43Q96FT9 208 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDHR3-213ENST00000488386 IFT57Q9NWB7 429 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 USP20Q9Y2K6 914 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 WDR90Q96KV7 1748 aa7.63□□□□□ -1.19
CDHR3-213ENST00000488386 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 ABCC4O15439 1325 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms