RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC44A5Q8NCS7 719 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 ARPP21Q9UBL0 812 aaPredicted RBP13.6□□□□□ -0.23
VTA1-203ENST00000452973 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 F8W031 263 aaPredicted RBP13.6□□□□□ -0.23
VTA1-203ENST00000452973 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
VTA1-203ENST00000452973 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
VTA1-203ENST00000452973 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
VTA1-203ENST00000452973 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 BECN2A8MW95 431 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 BAG3O95817 575 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 TFAP4Q01664 338 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 STX1AQ16623 288 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 TROAPQ12815 778 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
VTA1-203ENST00000452973 TBC1D16Q8TBP0 767 aa13.59□□□□□ -0.23
VTA1-203ENST00000452973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
VTA1-203ENST00000452973 BBOX1O75936 387 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 ATP2B4P23634 1241 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 BTDP43251 543 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 SYKP43405 635 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 PLCD1P51178 756 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 PTPAQ15257 358 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
VTA1-203ENST00000452973 JMYQ8N9B5 988 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 MAP3K14Q99558 947 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 CMA1P23946 247 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 GTF2IP78347 998 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 GSTO1P78417 241 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 SHC4Q6S5L8 630 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
VTA1-203ENST00000452973 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
VTA1-203ENST00000452973 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
VTA1-203ENST00000452973 AMOTL1Q8IY63 956 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
VTA1-203ENST00000452973 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 ORC4O43929 436 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 XBP1P17861 261 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 GRIN1Q05586 938 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 C12orf60Q5U649 245 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
VTA1-203ENST00000452973 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 LDHCP07864 332 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 FGRP09769 529 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 PKN1Q16512 942 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 SRBD1Q8N5C6 995 aaKnown RBP13.57□□□□□ -0.24
VTA1-203ENST00000452973 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
VTA1-203ENST00000452973 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
VTA1-203ENST00000452973 TSPY3P0CV98 308 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 TSPY8P0CW00 308 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
VTA1-203ENST00000452973 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
VTA1-203ENST00000452973 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 DPCR1Q3MIW9 517 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
VTA1-203ENST00000452973 UBR3Q6ZT12 1888 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 PDILTQ8N807 584 aa13.56□□□□□ -0.24
VTA1-203ENST00000452973 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
VTA1-203ENST00000452973 PPP6R2O75170 966 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 CALM1P0DP23 149 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 CALM2P0DP24 149 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 CALM3P0DP25 149 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 PICALMQ13492 652 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 IQCB1Q15051 598 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 NOM1Q5C9Z4 860 aaKnown RBP13.55□□□□□ -0.24
VTA1-203ENST00000452973 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
VTA1-203ENST00000452973 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 MXD3Q9BW11 206 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
VTA1-203ENST00000452973 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
VTA1-203ENST00000452973 NRBP1Q9UHY1 535 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 G3V3G9 751 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 MMP10P09238 476 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 RCAN1P53805 252 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 FUT2Q10981 343 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 RCSD1Q6JBY9 416 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
VTA1-203ENST00000452973 KRI1Q8N9T8 703 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms