RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
CTCFL-209ENST00000433949 RAD17O75943 681 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 NT5C2P49902 561 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 MECOMQ03112 1051 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 WDR66Q8TBY9 1149 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 PSMD1Q99460 953 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 ADCY5O95622 1261 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 SDR42E1Q8WUS8 393 aa13.83□□□□□ -0.2
CTCFL-209ENST00000433949 MRPS27Q92552 414 aaKnown RBP13.83□□□□□ -0.2
CTCFL-209ENST00000433949 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 SPTLC2O15270 562 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 FMNL1O95466 1100 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 RTN1Q16799 776 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 KRT40Q6A162 431 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 ENGASEQ8NFI3 743 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 FTOQ9C0B1 505 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 FGRP09769 529 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 SNW1Q13573 536 aaKnown RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 ANO1Q5XXA6 986 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 OTUD7BQ6GQQ9 843 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 CERS5Q8N5B7 392 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 CRNKL1Q9BZJ0 848 aaKnown RBP13.82□□□□□ -0.2
CTCFL-209ENST00000433949 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 ATP8A2Q9NTI2 1148 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
CTCFL-209ENST00000433949 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■■■□□ 15.1
CTCFL-209ENST00000433949 RXRAP19793 462 aa13.81□□□□□ -0.2
CTCFL-209ENST00000433949 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
CTCFL-209ENST00000433949 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
CTCFL-209ENST00000433949 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
CTCFL-209ENST00000433949 PHKBQ93100 1093 aa13.81□□□□□ -0.2
CTCFL-209ENST00000433949 TPM3P06753 285 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 SCNN1DP51172 638 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 PRELPP51888 382 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 ANO6Q4KMQ2 910 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 RANBP6O60518 1105 aaKnown RBP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 DEXIO95424 95 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 SLC39A14Q15043 492 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 JDP2Q8WYK2 163 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 AATFQ9NY61 560 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 ARPP21Q9UBL0 812 aaPredicted RBP13.8□□□□□ -0.2
CTCFL-209ENST00000433949 CLIC4Q9Y696 253 aa13.8□□□□□ -0.2
CTCFL-209ENST00000433949 USP17L3A6NCW0 530 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 USP17L4A6NCW7 530 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 GOLGA6L6A8MZA4 724 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 KIF28PB7ZC32 967 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 PPP6R2O75170 966 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 CALM1P0DP23 149 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 CALM2P0DP24 149 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 CALM3P0DP25 149 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 ZNF165P49910 485 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 SEC23AQ15436 765 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 STX1AQ16623 288 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 USP17L1Q7RTZ2 530 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 FMR1NBQ8N0W7 255 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-209ENST00000433949 FANCBQ8NB91 859 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 MYL10Q9BUA6 226 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-209ENST00000433949 TNKSO95271 1327 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 COL4A5P29400 1685 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 GPR162Q16538 588 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-209ENST00000433949 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-209ENST00000433949 TTF2Q9UNY4 1162 aaKnown RBP13.79□□□□□ -0.2
CTCFL-209ENST00000433949 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
CTCFL-209ENST00000433949 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
CTCFL-209ENST00000433949 ORC4O43929 436 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms