RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 HPSEQ9Y251 543 aa11.45□□□□□ -0.58
LINC00494-201ENST00000416742 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 FOXN1O15353 648 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 C16orf45Q96MC5 204 aaPredicted RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 BAZ2AQ9UIF9 1905 aaKnown RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 MYH2Q9UKX2 1941 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 RREB1Q92766 1687 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 SMTNL1A8MU46 457 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 TM4SF1P30408 202 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 TPD52L1Q16890 204 aaPredicted RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 USP5P45974 858 aa11.44□□□□□ -0.58
LINC00494-201ENST00000416742 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 XPO4Q9C0E2 1151 aaKnown RBP11.44□□□□□ -0.58
LINC00494-201ENST00000416742 POLR2DO15514 142 aaKnown RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 NFIXQ14938 502 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 TMC6Q7Z403 805 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 MYRIPQ8NFW9 859 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 PCDHA5Q9Y5H7 936 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 CNBD1Q8NA66 436 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 SKILP12757 684 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 RCAN1P53805 252 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 PDE4BQ07343 736 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 TROAPQ12815 778 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 PPP2R5BQ15173 497 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 PKN1Q16512 942 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 SPTY2D1Q68D10 685 aaPredicted RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
LINC00494-201ENST00000416742 CICQ96RK0 1608 aaPredicted RBP11.43□□□□□ -0.58
LINC00494-201ENST00000416742 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 PTPREP23469 700 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 KRT2P35908 639 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 DIXDC1Q155Q3 683 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 HSP90AA4PQ58FG1 418 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 USP49Q70CQ1 688 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 FBXO2Q9UK22 296 aaPredicted RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 PRPF3O43395 683 aaKnown RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 ATP1A3P13637 1013 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 ZNF592Q92610 1267 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 SHISA4Q96DD7 197 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 ARID3AQ99856 593 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 TRMT1Q9NXH9 659 aaKnown RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 TUBE1Q9UJT0 475 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 CEP131Q9UPN4 1083 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 LAMB2P55268 1798 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 BCORQ6W2J9 1755 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 NID2Q14112 1375 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 TIAM2Q8IVF5 1701 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 CALM1P0DP23 149 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 CALM2P0DP24 149 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 CALM3P0DP25 149 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 TNNT1P13805 278 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 NCAPHQ15003 741 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 EARS2Q5JPH6 523 aaKnown RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 DYNLL2Q96FJ2 89 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 BPIFA3Q9BQP9 254 aa11.42□□□□□ -0.58
LINC00494-201ENST00000416742 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
LINC00494-201ENST00000416742 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 SERPINC1P01008 464 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 FANCCQ00597 558 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 ZNF174Q15697 407 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 CSRNP2Q9H175 543 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 RGL2O15211 777 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 TFAP4Q01664 338 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 GRAPQ13588 217 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 GRIK5Q16478 980 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 NOL10Q9BSC4 688 aaKnown RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
LINC00494-201ENST00000416742 ARPP21Q9UBL0 812 aaPredicted RBP11.41□□□□□ -0.58
LINC00494-201ENST00000416742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 FAM237AA0A1B0GTK4 181 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
LINC00494-201ENST00000416742 NLRP5P59047 1200 aa11.4□□□□□ -0.58
LINC00494-201ENST00000416742 FUT2Q10981 343 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms