RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
NPHS1-202ENST00000378910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPHS1-202ENST00000378910 IPO5O00410 1097 aaKnown RBP13.18□□□□□ -0.3
NPHS1-202ENST00000378910 BMP15O95972 392 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 WDR75Q8IWA0 830 aaKnown RBP13.18□□□□□ -0.3
NPHS1-202ENST00000378910 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
NPHS1-202ENST00000378910 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
NPHS1-202ENST00000378910 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 CCDC189A1A4V9 331 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 SMAPO00193 183 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 SNX1Q13596 522 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 TRIM58Q8NG06 486 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 MAGEA8P43361 318 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 PSMD7P51665 324 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 UBXN1Q04323 297 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
NPHS1-202ENST00000378910 KCNF1Q9H3M0 494 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
NPHS1-202ENST00000378910 PFKFB1P16118 471 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 ZBTB17Q13105 803 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
NPHS1-202ENST00000378910 NANOGNBQ7Z5D8 188 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 SUCLG2Q96I99 432 aa13.17□□□□□ -0.3
NPHS1-202ENST00000378910 G3V3G9 751 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 PBRM1Q86U86 1689 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 MYO1BO43795 1136 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 FGFR1OPO95684 399 aaKnown RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 NDUFA8P51970 172 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 TIMM10P62072 90 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 A6NNZ2 444 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CUTAO60888 179 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 HOXB7P09629 217 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 ATF3P18847 181 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 ICA1Q05084 483 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CCDC42Q96M95 316 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CETN3O15182 167 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 VAV2P52735 878 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 PNOCQ13519 176 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 SLC9C2Q5TAH2 1124 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 C3orf20Q8ND61 904 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 USP6NLQ92738 828 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 VPS16Q9H269 839 aa13.16□□□□□ -0.3
NPHS1-202ENST00000378910 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 UTP6Q9NYH9 597 aaKnown RBP13.16□□□□□ -0.3
NPHS1-202ENST00000378910 PSMA7O14818 248 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 PFKFB2O60825 505 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 SLC8A3P57103 927 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 SEPT11Q9NVA2 429 aaKnown RBP13.15□□□□□ -0.3
NPHS1-202ENST00000378910 DNAJC8O75937 253 aaPredicted RBP13.15□□□□□ -0.3
NPHS1-202ENST00000378910 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
NPHS1-202ENST00000378910 TRPM2O94759 1503 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 IDEP14735 1019 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 TMCO5AQ8N6Q1 288 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
NPHS1-202ENST00000378910 TSG101Q99816 390 aa13.15□□□□□ -0.3
NPHS1-202ENST00000378910 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms