RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 XPO4Q9C0E2 1151 aaKnown RBP18.22■□□□□ 0.51
SYNM-201ENST00000328642 SAMM50Q9Y512 469 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 NFIXQ14938 502 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 GNAQP50148 359 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 CEP135Q66GS9 1140 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 KIAA1328Q86T90 577 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 SP4Q02446 784 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 KIF4BQ2VIQ3 1234 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 LZTFL1Q9NQ48 299 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 PCDHB6Q9Y5E3 794 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 PCDHA5Q9Y5H7 936 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 CSF1RP07333 972 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 ARID5BQ14865 1188 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 DYMQ7RTS9 669 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 UTYO14607 1347 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 MYL5Q02045 173 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 ARID5AQ03989 594 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 C3orf67Q6ZVT6 689 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 KRT27Q7Z3Y8 459 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 PDCL2Q8N4E4 241 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 LINC00301Q8NCQ3 95 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 OXER1Q8TDS5 423 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 CCDC12Q8WUD4 166 aaPredicted RBP18.21■□□□□ 0.51
SYNM-201ENST00000328642 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
SYNM-201ENST00000328642 PYCARDQ9ULZ3 195 aa18.21■□□□□ 0.51
SYNM-201ENST00000328642 KLRF2D3W0D1 207 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 SLC16A2P36021 539 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 FANCCQ00597 558 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 LONRF3Q496Y0 759 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 CEP89Q96ST8 783 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 ZBTB21Q9ULJ3 1066 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 RPAP1Q9BWH6 1393 aaPredicted RBP18.2■□□□□ 0.5
SYNM-201ENST00000328642 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 CALML3P27482 149 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 CCDC148Q8NFR7 591 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 UBXN4Q92575 508 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 DRC1Q96MC2 740 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 GJA3Q9Y6H8 435 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
SYNM-201ENST00000328642 PTGDRQ13258 359 aa18.2■□□□□ 0.5
SYNM-201ENST00000328642 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
SYNM-201ENST00000328642 YEATS4O95619 227 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 MMP10P09238 476 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 TDRD12Q587J7 1177 aaKnown RBP18.19■□□□□ 0.5
SYNM-201ENST00000328642 MB21D2Q8IYB1 491 aaPredicted RBP18.19■□□□□ 0.5
SYNM-201ENST00000328642 IQUBQ8NA54 791 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 SH3RF3Q8TEJ3 882 aaPredicted RBP18.19■□□□□ 0.5
SYNM-201ENST00000328642 CLRN2A0PK11 232 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 H0YIN7 160 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 IBSPP21815 317 aaPredicted RBP18.19■□□□□ 0.5
SYNM-201ENST00000328642 CASP7P55210 303 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 PLS1Q14651 629 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 USP42Q9H9J4 1324 aaKnown RBP18.19■□□□□ 0.5
SYNM-201ENST00000328642 PLCG2P16885 1265 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 SYT10Q6XYQ8 523 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 GOLPH3LQ9H4A5 285 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 EXOC1Q9NV70 894 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 CTNND2Q9UQB3 1225 aa18.19■□□□□ 0.5
SYNM-201ENST00000328642 IGSF3O75054 1194 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
SYNM-201ENST00000328642 ZFYVE27Q5T4F4 411 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 CACNA2D4Q7Z3S7 1137 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 KIF28PB7ZC32 967 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 LARGE2Q8N3Y3 721 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 PPP1R9BQ96SB3 815 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 FANCLQ9NW38 375 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 CUTAO60888 179 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 POSTNQ15063 836 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 KANK3Q6NY19 840 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 TXNRD3Q86VQ6 643 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 CLEC10AQ8IUN9 316 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
SYNM-201ENST00000328642 MXD3Q9BW11 206 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 RAB34Q9BZG1 259 aa18.18■□□□□ 0.5
SYNM-201ENST00000328642 RBM28Q9NW13 759 aaKnown RBP18.18■□□□□ 0.5
SYNM-201ENST00000328642 CHMP2AO43633 222 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 CAVIN2O95810 425 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
SYNM-201ENST00000328642 HSPA1LP34931 641 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 DDIT3P35638 169 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
SYNM-201ENST00000328642 FAM205CA6NFA0 338 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 SLC1A4P43007 532 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 CCDC40Q4G0X9 1142 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 ZFP91Q96JP5 570 aaPredicted RBP18.17■□□□□ 0.5
SYNM-201ENST00000328642 CSRNP2Q9H175 543 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 C3P01024 1663 aa18.17■□□□□ 0.5
SYNM-201ENST00000328642 SMCO2A6NFE2 343 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms