RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SPICE1Q8N0Z3 855 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 TBC1D7Q9P0N9 293 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
TOP3A-201ENST00000321105 UBN2Q6ZU65 1347 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 KLRK1P26718 216 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 CALML3P27482 149 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 IQUBQ8NA54 791 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 EXOC1Q9NV70 894 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 SYT10Q6XYQ8 523 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 PCDHA5Q9Y5H7 936 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 MYO1BO43795 1136 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 FANCCQ00597 558 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-201ENST00000321105 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
TOP3A-201ENST00000321105 SH2B2O14492 632 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CHMP2AO43633 222 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CAVIN2O95810 425 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 SLC16A2P36021 539 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 AFF2P51816 1311 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 COL15A1P39059 1388 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 PLCG2P16885 1265 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-201ENST00000321105 GSDMDP57764 484 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 PTGDRQ13258 359 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
TOP3A-201ENST00000321105 PCDHB6Q9Y5E3 794 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CLRN2A0PK11 232 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 H0YIN7 160 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 GUCY1A2P33402 732 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 SLC1A4P43007 532 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 NFIXQ14938 502 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CUL5Q93034 780 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-201ENST00000321105 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
TOP3A-201ENST00000321105 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 YEATS4O95619 227 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 TNNT3P45378 269 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 FANCLQ9NW38 375 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 MMP10P09238 476 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 POSTNQ15063 836 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 CCDC70Q6NSX1 233 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 FAM84BQ96KN1 310 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 ADKP55263 362 aaKnown RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 MAEAQ7L5Y9 396 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 SMARCC2Q8TAQ2 1214 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 CPDO75976 1380 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 USP8P40818 1118 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 FKBP15Q5T1M5 1219 aa12.47□□□□□ -0.41
TOP3A-201ENST00000321105 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
TOP3A-201ENST00000321105 SMCO2A6NFE2 343 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 TCP10L2B9ZVM9 353 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 CUTAO60888 179 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 GNA11P29992 359 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 EPSTI1Q96J88 318 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 UBXN1Q04323 297 aa12.46□□□□□ -0.41
TOP3A-201ENST00000321105 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
TOP3A-201ENST00000321105 ZSCAN12O43309 604 aa12.46□□□□□ -0.42
TOP3A-201ENST00000321105 KIF5CO60282 957 aa12.46□□□□□ -0.42
TOP3A-201ENST00000321105 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.42
TOP3A-201ENST00000321105 CSRNP2Q9H175 543 aa12.46□□□□□ -0.42
TOP3A-201ENST00000321105 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.42
TOP3A-201ENST00000321105 MST1RQ04912 1400 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 PSMA7O14818 248 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 CCP110O43303 1012 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 TAB2Q9NYJ8 693 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 NARFQ9UHQ1 456 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 SMIM22K7EJ46 135 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 ATP1A3P13637 1013 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 CASQ1P31415 396 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 TECP42680 631 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms