RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 USH1GQ495M9 461 aa16.1■□□□□ 0.17
EDC3-201ENST00000315127 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
EDC3-201ENST00000315127 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
EDC3-201ENST00000315127 SNAP25P60880 206 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 CLSTN2Q9H4D0 955 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 IFNKQ9P0W0 207 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 GDF11O95390 407 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 KIF23Q02241 960 aaPredicted RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 LRMPQ12912 555 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 NSUN4Q96CB9 384 aaKnown RBP16.09■□□□□ 0.17
EDC3-201ENST00000315127 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 LY9Q9HBG7 655 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
EDC3-201ENST00000315127 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.17
EDC3-201ENST00000315127 ATP2B4P23634 1241 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 CTR9Q6PD62 1173 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 ANKRD20A12PQ8NF67 263 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.17
EDC3-201ENST00000315127 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.17
EDC3-201ENST00000315127 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.17
EDC3-201ENST00000315127 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 RTL9Q8NET4 1388 aa16.08■□□□□ 0.17
EDC3-201ENST00000315127 INF2Q27J81 1249 aa16.08■□□□□ 0.16
EDC3-201ENST00000315127 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
EDC3-201ENST00000315127 GYS1P13807 737 aa16.08■□□□□ 0.16
EDC3-201ENST00000315127 GRIK5Q16478 980 aa16.08■□□□□ 0.16
EDC3-201ENST00000315127 CCDC43Q96MW1 224 aaKnown RBP16.08■□□□□ 0.16
EDC3-201ENST00000315127 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
EDC3-201ENST00000315127 CTAGE5O15320 804 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.07■□□□□ 0.16
EDC3-201ENST00000315127 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
EDC3-201ENST00000315127 SERTAD1Q9UHV2 236 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 TXKP42681 527 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 PLCD1P51178 756 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
EDC3-201ENST00000315127 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
EDC3-201ENST00000315127 TPM1P09493 284 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 FGFR2P21802 821 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 MIGA2Q7L4E1 593 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
EDC3-201ENST00000315127 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
EDC3-201ENST00000315127 SFPQP23246 707 aaKnown RBP eCLIP16.06■□□□□ 0.16
EDC3-201ENST00000315127 VGLL2Q8N8G2 317 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 NKX2-3Q8TAU0 364 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 TSC1Q92574 1164 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
EDC3-201ENST00000315127 BBOX1O75936 387 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 PLCG2P16885 1265 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 STAT6P42226 847 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 UBASH3AP57075 661 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 RRAGBQ5VZM2 374 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
EDC3-201ENST00000315127 UQCRHP07919 91 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 AOC3Q16853 763 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
EDC3-201ENST00000315127 PDE6BP35913 854 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 COA7Q96BR5 231 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
EDC3-201ENST00000315127 CALM1P0DP23 149 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 CALM2P0DP24 149 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 CALM3P0DP25 149 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
EDC3-201ENST00000315127 SLC1A4P43007 532 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
EDC3-201ENST00000315127 ADALQ6DHV7 355 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
EDC3-201ENST00000315127 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 IGDCC4Q8TDY8 1250 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
EDC3-201ENST00000315127 ZKSCAN5Q9Y2L8 839 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 GOLGA8FQ08AF8 430 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 GOLGA8DPQ0D2H9 430 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 PTGDRQ13258 359 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
EDC3-201ENST00000315127 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms