RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Mtss1lQ6P9S0 715 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Stag1Q9D3E6 1258 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tmod4Q9JLH8 345 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Col15a1O35206 1367 aa9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Wdr3Q8BHB4 942 aaKnown RBP9.79□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Glt1d1A4FUP9 346 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc170D3YXL0 722 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Herc4Q6PAV2 1057 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Otop3Q80UF9 577 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Hexim1Q8R409 356 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gm28919A0A087WP35 240 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cbfa2t2O70374 594 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 NppbP40753 121 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Zbtb39Q6PDK0 712 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Skida1Q80YR3 822 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Yeats4Q9CR11 227 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cct6aP80317 531 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Zbtb40Q6PCS8 1258 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Snd1Q78PY7 910 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Lrsam1Q80ZI6 727 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ubxn1Q922Y1 297 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Frat1P70339 274 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Agbl1Q09M05 972 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tbc1d9bQ5SVR0 1263 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Spa17Q62252 149 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Lrrc41Q8K1C9 807 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Tmco4Q91WU4 631 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Mrpl50Q8VDT9 159 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Edc4Q3UJB9 1406 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Eef1dP57776 281 aaKnown RBP9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Bicd1Q8BR07 835 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Atf7ipQ7TT18 1306 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Snapc4Q8BP86 1333 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Nphp4P59240 1425 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Mctp2Q5RJH2 878 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc113Q8C5T8 377 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Cabp7Q91ZM8 215 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Mast1Q9R1L5 1570 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Gnat2P50149 354 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc174Q3U155 467 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Fndc3aQ8BX90 1198 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ppp4r4Q8C0Y0 875 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Dnajc17Q91WT4 303 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Six6os1Q9CTN5 574 aa9.78□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Sec62Q8BU14 398 aaKnown RBP9.77□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Zcrb1Q9CZ96 217 aaKnown RBP9.77□□□□□ -0.84
Ttc28-201ENSMUST00000040111 Ccdc152E9PX14 254 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Eddm13E9Q7F5 164 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Leo1Q5XJE5 667 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Plcd1Q8R3B1 756 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cdc26Q99JP4 85 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Nmt2O70311 529 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Plcb3P51432 1234 aaKnown RBP9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 CerkQ8K4Q7 531 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Magea1O89006 320 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Magea5O89009 320 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Trim56Q80VI1 734 aaKnown RBP9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cplx4Q80WM3 160 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Aldh1l2Q8K009 923 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Magea2Q9R2A2 320 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Hspd1P63038 573 aaKnown RBP9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Klhl7Q8BUL5 586 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 PaoxQ8C0L6 504 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Adgra1Q8C4G9 578 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Taf12Q8VE65 161 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 SncbQ91ZZ3 133 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Utp18Q5SSI6 552 aaKnown RBP9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Pdrg1P59048 133 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ubn1Q4G0F8 1135 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Adcy3Q8VHH7 1145 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Suclg2Q9Z2I8 433 aa9.77□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Gna15P30678 374 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Nop2Q922K7 793 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Myl7Q9QVP4 175 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Capn2O08529 700 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Kif5cP28738 956 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Fermt1P59113 677 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Kctd19Q562E2 927 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 AsphQ8BSY0 741 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ptrh1Q8BW00 204 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 NelfbQ8C4Y3 580 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cyp2c68K7N6C2 491 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Drc1Q3USS3 753 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Rgl1Q60695 768 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Atp1a4Q9WV27 1032 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cib2Q9Z309 187 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Prr5lA2AVJ5 370 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 InhbeO08717 350 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Hoxa13Q62424 386 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 AlkP97793 1621 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Tnnc1P19123 161 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cdhr2E9Q7P9 1308 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Ubn2Q80WC1 1314 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Cpsf2O35218 782 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Rassf2Q8BMS9 326 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Uso1Q9Z1Z0 959 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Arhgef11Q68FM7 1552 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 VimP20152 466 aaKnown RBP9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Trak2Q6P9N8 913 aa9.76□□□□□ -0.85
Ttc28-201ENSMUST00000040111 Dph5Q9CWQ0 281 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms