RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Rexo5D3YW29 759 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Scgb2b19J3QM75 112 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Arhgap6O54834 987 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Mcm5P49718 733 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 LbrQ3U9G9 626 aaKnown RBP13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ppm1eQ80TL0 749 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trim56Q80VI1 734 aaKnown RBP13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Slitrk3Q810B9 980 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Pde5aQ8CG03 865 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Q8K2W9 541 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Uap1Q91YN5 522 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ccdc39Q9D5Y1 937 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Calr3Q9D9Q6 380 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Hsd3b7Q9EQC1 369 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Eif2ak3Q9Z2B5 1114 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Setdb1O88974 1307 aa13.67□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Myh7Q91Z83 1935 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ttll7A4Q9F0 912 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gm6588E9Q3K0 461 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Foxp1P58462 705 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Drc7Q6V3W6 876 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Sval3Q76I99 144 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Gpt2Q8BGT5 522 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cfap69Q8BH53 942 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Bola3Q8CEI1 110 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cfap45Q9D9U9 551 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Appbp2Q9DAX9 585 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Itga2bQ9QUM0 1033 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Mrc1Q61830 1456 aa13.66□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Tbc1d2B1AVH7 922 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cyp3a57D3YYZ0 503 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cyp3a59D3Z2W7 503 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Eya2O08575 532 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Metap2O08663 478 aaKnown RBP13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 AppP12023 770 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ckap2Q3V1H1 664 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Lrrn2Q6PHP6 730 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Trim6Q8BGE7 488 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Vps53Q8CCB4 832 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ccdc47Q9D024 483 aaKnown RBP13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 IncenpQ9WU62 880 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Stat2Q9WVL2 923 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cul4bA2A432 970 aaKnown RBP13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 MeiocA2AG06 965 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Cyp26a1O55127 497 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Rnaseh1O70338 285 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Dnm1P39053 867 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Rnf40Q3U319 1001 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Soga3Q6NZL0 945 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Hook2Q7TMK6 716 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Ccdc93Q7TQK5 629 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Calcoco1Q8CGU1 691 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 AdarQ99MU3 1178 aaKnown RBP13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Kcnq2Q9Z351 759 aa13.65□□□□□ -0.22
Ufd1-201ENSMUST00000005394 Tpm3-rs7D3Z2H9 248 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Dnajc21E9Q8D0 531 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ugt1a6bK9J7B2 531 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Timm10P62073 90 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ano9P86044 747 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ubxn2bQ0KL01 331 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Fkbp5Q64378 456 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ugt1a6Q64435 531 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 BcrQ6PAJ1 1270 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ugt1a7cQ6ZQM8 531 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Baiap3Q80TT2 1134 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Jmjd4Q8BFT6 427 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Wasf1Q8R5H6 559 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Saal1Q9D2C2 474 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 LratQ9JI60 231 aa13.64□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Naaladl2A0A0N4SUJ3 795 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Rgs22G3UYX5 1258 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Psmd14O35593 310 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Slc4a1P04919 929 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Sdc2P43407 202 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Eif5P59325 429 aaKnown RBP13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Irx1P81068 480 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Jdp2P97875 163 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Il17raQ60943 864 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Mrps31Q61733 384 aaKnown RBP13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Jarid2Q62315 1234 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Exoc8Q6PGF7 716 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ccdc155Q80VJ8 648 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Tspyl4Q8VD63 406 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Emilin1Q99K41 1017 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Krt23Q99PS0 422 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ehd4Q9EQP2 541 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Nfu1Q9QZ23 255 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Uso1Q9Z1Z0 959 aaKnown RBP13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 CluhQ5SW19 1315 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Top1Q04750 767 aaKnown RBP13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Epn1Q80VP1 575 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Trim52Q8CDV4 233 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Stap2Q8R0L1 411 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Pcdha7Q91Y13 937 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Msantd4Q91YU3 345 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Ank1Q02357 1862 aa13.63□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Kdm3aQ6PCM1 1323 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Cnbd1B1AWM0 430 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Casp12O08736 419 aa13.62□□□□□ -0.23
Ufd1-201ENSMUST00000005394 Olfr121Q5CZY0 321 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms