RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Dnah11E9Q7N9 4488 aa7.28□□□□□ -1.24
Herc4-208ENSMUST00000219577 Gm10065F6TJM2 114 aa7.28□□□□□ -1.24
Herc4-208ENSMUST00000219577 Ccdc179J3QM76 67 aa7.27□□□□□ -1.25
Herc4-208ENSMUST00000219577 Gm20661K7N787 53 aa7.26□□□□□ -1.25
Herc4-208ENSMUST00000219577 Defb1P56386 69 aa7.26□□□□□ -1.25
Herc4-208ENSMUST00000219577 Huwe1Q7TMY8 4377 aaKnown RBP7.26□□□□□ -1.25
Herc4-208ENSMUST00000219577 AW011738F6S7Q2 159 aa7.25□□□□□ -1.25
Herc4-208ENSMUST00000219577 Defb11Q8R2I7 77 aa7.25□□□□□ -1.25
Herc4-208ENSMUST00000219577 Dnah17Q69Z23 4481 aa7.25□□□□□ -1.25
Herc4-208ENSMUST00000219577 Dnah5Q8VHE6 4621 aa7.24□□□□□ -1.25
Herc4-208ENSMUST00000219577 NbdyA0A0N4SUI7 68 aa7.24□□□□□ -1.25
Herc4-208ENSMUST00000219577 Gm10999F6Q4M4 69 aa7.24□□□□□ -1.25
Herc4-208ENSMUST00000219577 Phxr4P15974 95 aa7.24□□□□□ -1.25
Herc4-208ENSMUST00000219577 Dnah9B1AR51 4484 aa7.22□□□□□ -1.25
Herc4-208ENSMUST00000219577 Gm2696A0A1W2P709 240 aa7.22□□□□□ -1.25
Herc4-208ENSMUST00000219577 Krtap14O08640 167 aa7.21□□□□□ -1.25
Herc4-208ENSMUST00000219577 Fras1Q80T14 4010 aa7.21□□□□□ -1.25
Herc4-208ENSMUST00000219577 H2al1kJ3QP08 105 aa7.21□□□□□ -1.26
Herc4-208ENSMUST00000219577 H2al1mQ9DAD9 105 aa7.21□□□□□ -1.26
Herc4-208ENSMUST00000219577 RetnlbQ99P86 105 aa7.21□□□□□ -1.26
Herc4-208ENSMUST00000219577 Gm2310J3QNJ2 377 aa7.2□□□□□ -1.26
Herc4-208ENSMUST00000219577 Krtap29-1A2A5X4 342 aa7.2□□□□□ -1.26
Herc4-208ENSMUST00000219577 Ndufs5Q99LY9 106 aa7.2□□□□□ -1.26
Herc4-208ENSMUST00000219577 Cypt15B1AXS0 87 aa7.2□□□□□ -1.26
Herc4-208ENSMUST00000219577 Cypt14J3QPF7 87 aa7.19□□□□□ -1.26
Herc4-208ENSMUST00000219577 Gm21798J3QNU5 87 aa7.18□□□□□ -1.26
Herc4-208ENSMUST00000219577 PrkdcP97313 4128 aa7.17□□□□□ -1.26
Herc4-208ENSMUST00000219577 Gm9918Q8BUR5 174 aa7.15□□□□□ -1.26
Herc4-208ENSMUST00000219577 Q8BGJ3 129 aa7.14□□□□□ -1.27
Herc4-208ENSMUST00000219577 PlecQ9QXS1 4691 aaKnown RBP7.14□□□□□ -1.27
Herc4-208ENSMUST00000219577 Gm16253D3Z167 63 aa7.12□□□□□ -1.27
Herc4-208ENSMUST00000219577 Sox16Q62247 57 aa7.08□□□□□ -1.28
Herc4-208ENSMUST00000219577 Dnah1E9Q8T7 4250 aa7.07□□□□□ -1.28
Herc4-208ENSMUST00000219577 Ndufb1P0DN34 57 aa7.07□□□□□ -1.28
Herc4-208ENSMUST00000219577 Dnah7cA0A087WR13 4024 aa7.06□□□□□ -1.28
Herc4-208ENSMUST00000219577 Tnp2P11378 117 aa7.02□□□□□ -1.29
Herc4-208ENSMUST00000219577 2310034C09RikQ9D746 214 aa7.01□□□□□ -1.29
Herc4-208ENSMUST00000219577 4933415A04RikQ9D443 101 aa7□□□□□ -1.29
Herc4-208ENSMUST00000219577 Stard9Q80TF6 4561 aa6.98□□□□□ -1.29
Herc4-208ENSMUST00000219577 TnxbO35452 4006 aa6.96□□□□□ -1.3
Herc4-208ENSMUST00000219577 Dnah7aE9Q0T8 4024 aa6.93□□□□□ -1.3
Herc4-208ENSMUST00000219577 Sec61gP60060 68 aa6.93□□□□□ -1.3
Herc4-208ENSMUST00000219577 Lrp1bQ9JI18 4599 aa6.89□□□□□ -1.31
Herc4-208ENSMUST00000219577 Gm3646F6S692 53 aa6.89□□□□□ -1.31
Herc4-208ENSMUST00000219577 Limd2Q8BGB5 128 aa6.88□□□□□ -1.31
Herc4-208ENSMUST00000219577 Uqcr11Q9CPX8 56 aa6.86□□□□□ -1.31
Herc4-208ENSMUST00000219577 Hectd4E9Q2E4 4418 aa6.84□□□□□ -1.31
Herc4-208ENSMUST00000219577 4930507D05RikQ8C9C9 103 aa6.82□□□□□ -1.32
Herc4-208ENSMUST00000219577 Gm4491E0CX42 125 aa6.81□□□□□ -1.32
Herc4-208ENSMUST00000219577 OxtP35454 125 aa6.81□□□□□ -1.32
Herc4-208ENSMUST00000219577 Gm26620Q9CY65 116 aa6.79□□□□□ -1.32
Herc4-208ENSMUST00000219577 Gm10643Q3URG9 111 aa6.79□□□□□ -1.32
Herc4-208ENSMUST00000219577 Vps13dB1ART2 4390 aa6.77□□□□□ -1.33
Herc4-208ENSMUST00000219577 Dync2h1Q45VK7 4306 aa6.77□□□□□ -1.33
Herc4-208ENSMUST00000219577 Ryr3A2AGL3 4863 aa6.75□□□□□ -1.33
Herc4-208ENSMUST00000219577 ApobE9Q414 4505 aa6.71□□□□□ -1.34
Herc4-208ENSMUST00000219577 1700042G07RikB1AUF7 90 aa6.68□□□□□ -1.34
Herc4-208ENSMUST00000219577 Pkd1O08852 4293 aa6.66□□□□□ -1.34
Herc4-208ENSMUST00000219577 Dnah2P0C6F1 4456 aa6.65□□□□□ -1.34
Herc4-208ENSMUST00000219577 Lrp1Q91ZX7 4545 aaKnown RBP6.65□□□□□ -1.35
Herc4-208ENSMUST00000219577 Gm3880A0A1B0GSB3 72 aa6.65□□□□□ -1.35
Herc4-208ENSMUST00000219577 Gm9736A0A1W2P7N1 277 aa6.63□□□□□ -1.35
Herc4-208ENSMUST00000219577 Krtap15-1Q9QZU5 150 aa6.63□□□□□ -1.35
Herc4-208ENSMUST00000219577 D6Ertd527eA0A0N4SWI3 464 aa6.62□□□□□ -1.35
Herc4-208ENSMUST00000219577 2310079G19RikQ9D6L6 185 aa6.62□□□□□ -1.35
Herc4-208ENSMUST00000219577 Vps13bQ80TY5 3993 aa6.61□□□□□ -1.35
Herc4-208ENSMUST00000219577 Gm9821Q8K076 103 aa6.59□□□□□ -1.35
Herc4-208ENSMUST00000219577 CriptO70333 101 aa6.59□□□□□ -1.35
Herc4-208ENSMUST00000219577 Fat1A0A1L1SQU7 4645 aa6.56□□□□□ -1.36
Herc4-208ENSMUST00000219577 Dync1h1Q9JHU4 4644 aaKnown RBP6.54□□□□□ -1.36
Herc4-208ENSMUST00000219577 Gm17606F6ZL36 78 aa6.54□□□□□ -1.36
Herc4-208ENSMUST00000219577 Gm5965D3Z724 196 aa6.53□□□□□ -1.36
Herc4-208ENSMUST00000219577 Krtap3-2Q9D638 99 aa6.53□□□□□ -1.36
Herc4-208ENSMUST00000219577 Krtap3-3Q9D7P0 99 aa6.53□□□□□ -1.36
Herc4-208ENSMUST00000219577 Rnase13Q5GAM7 153 aa6.51□□□□□ -1.37
Herc4-208ENSMUST00000219577 Gm11939A2A592 99 aa6.5□□□□□ -1.37
Herc4-208ENSMUST00000219577 Gm5767A0A0J9YTU8 78 aa6.48□□□□□ -1.37
Herc4-208ENSMUST00000219577 Fat3Q8BNA6 4555 aa6.48□□□□□ -1.37
Herc4-208ENSMUST00000219577 Fat2Q5F226 4351 aa6.46□□□□□ -1.38
Herc4-208ENSMUST00000219577 A930033H14RikG5E8X6 103 aa6.45□□□□□ -1.38
Herc4-208ENSMUST00000219577 Gm10382Q3V0T5 144 aa6.44□□□□□ -1.38
Herc4-208ENSMUST00000219577 Cox6b2Q80ZN9 88 aa6.43□□□□□ -1.38
Herc4-208ENSMUST00000219577 SacsQ9JLC8 4582 aa6.41□□□□□ -1.38
Herc4-208ENSMUST00000219577 Pkhd1E9PZ36 4059 aa6.39□□□□□ -1.39
Herc4-208ENSMUST00000219577 Gm20537G3UYK7 97 aa6.39□□□□□ -1.39
Herc4-208ENSMUST00000219577 Mycbp2Q7TPH6 4711 aa6.38□□□□□ -1.39
Herc4-208ENSMUST00000219577 Ryr1E9PZQ0 5035 aa6.37□□□□□ -1.39
Herc4-208ENSMUST00000219577 Rps29P62274 56 aa6.35□□□□□ -1.39
Herc4-208ENSMUST00000219577 Gm12216A0A1W2P827 62 aa6.35□□□□□ -1.39
Herc4-208ENSMUST00000219577 Krtap19-5O08632 62 aa6.33□□□□□ -1.4
Herc4-208ENSMUST00000219577 Pkhd1l1Q80ZA4 4249 aa6.33□□□□□ -1.4
Herc4-208ENSMUST00000219577 Abca13Q5SSE9 5034 aa6.31□□□□□ -1.4
Herc4-208ENSMUST00000219577 Gm9955Q8CEJ8 102 aa6.29□□□□□ -1.4
Herc4-208ENSMUST00000219577 HydinQ80W93 5154 aa6.27□□□□□ -1.41
Herc4-208ENSMUST00000219577 Rpl37Q9D823 97 aa6.23□□□□□ -1.41
Herc4-208ENSMUST00000219577 2310057N15RikQ9D6T8 200 aa6.22□□□□□ -1.41
Herc4-208ENSMUST00000219577 Kiaa1109A2AAE1 5005 aa6.18□□□□□ -1.42
Herc4-208ENSMUST00000219577 Pla2g10Q9QXX3 151 aa6.18□□□□□ -1.42
Herc4-208ENSMUST00000219577 Kmt2cQ8BRH4 4903 aa6.17□□□□□ -1.42
Herc4-208ENSMUST00000219577 Gm10318A0A1W2P728 225 aa6.16□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms