RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Hectd4E9Q2E4 4418 aa14.01□□□□□ -0.17
Ssbp4-205ENSMUST00000210369 Gm2310J3QNJ2 377 aa14□□□□□ -0.17
Ssbp4-205ENSMUST00000210369 A0A286YE49 62 aa13.99□□□□□ -0.17
Ssbp4-205ENSMUST00000210369 Scgb1b2O35176 93 aa13.96□□□□□ -0.17
Ssbp4-205ENSMUST00000210369 BikO70337 150 aa13.95□□□□□ -0.18
Ssbp4-205ENSMUST00000210369 Pcp4P63054 62 aa13.94□□□□□ -0.18
Ssbp4-205ENSMUST00000210369 Mrpl55Q9CZ83 127 aa13.94□□□□□ -0.18
Ssbp4-205ENSMUST00000210369 Tmem258P61166 79 aa13.91□□□□□ -0.18
Ssbp4-205ENSMUST00000210369 Igkv3-3A0A140T8Q0 119 aa13.9□□□□□ -0.18
Ssbp4-205ENSMUST00000210369 SmcpP15265 143 aa13.88□□□□□ -0.19
Ssbp4-205ENSMUST00000210369 Kmt2cQ8BRH4 4903 aa13.87□□□□□ -0.19
Ssbp4-205ENSMUST00000210369 Dnah8Q91XQ0 4731 aa13.86□□□□□ -0.19
Ssbp4-205ENSMUST00000210369 Gm19935A0A1B0GSF9 52 aa13.83□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Smlr1J3QMJ4 66 aa13.82□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Fat2Q5F226 4351 aa13.82□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Spaca4Q80ZQ0 127 aa13.8□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Coa6Q8BGD8 79 aa13.78□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Dph3Q8K0W9 82 aa13.78□□□□□ -0.2
Ssbp4-205ENSMUST00000210369 Atox1O08997 68 aaKnown RBP13.76□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 Defb12Q8K4N3 78 aa13.76□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 1700074P13RikQ9D9G7 251 aa13.75□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 Herc2Q4U2R1 4836 aa13.74□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 Vps13bQ80TY5 3993 aa13.73□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 Cypt15B1AXS0 87 aa13.71□□□□□ -0.21
Ssbp4-205ENSMUST00000210369 Smim20D3Z7Q2 69 aa13.71□□□□□ -0.22
Ssbp4-205ENSMUST00000210369 Spint4Q9D263 159 aa13.71□□□□□ -0.22
Ssbp4-205ENSMUST00000210369 Pkhd1l1Q80ZA4 4249 aa13.69□□□□□ -0.22
Ssbp4-205ENSMUST00000210369 Birc6O88738 4882 aa13.68□□□□□ -0.22
Ssbp4-205ENSMUST00000210369 RetnlbQ99P86 105 aa13.66□□□□□ -0.22
Ssbp4-205ENSMUST00000210369 Rps29P62274 56 aa13.64□□□□□ -0.23
Ssbp4-205ENSMUST00000210369 Pet100P0DJE0 76 aa13.6□□□□□ -0.23
Ssbp4-205ENSMUST00000210369 Rps28P62858 69 aaKnown RBP13.6□□□□□ -0.23
Ssbp4-205ENSMUST00000210369 Krtap19-5O08632 62 aa13.56□□□□□ -0.24
Ssbp4-205ENSMUST00000210369 Defb13Q8R2I4 64 aa13.54□□□□□ -0.24
Ssbp4-205ENSMUST00000210369 Kiaa1109A2AAE1 5005 aa13.54□□□□□ -0.24
Ssbp4-205ENSMUST00000210369 Gm10267M0QWD8 85 aa13.53□□□□□ -0.24
Ssbp4-205ENSMUST00000210369 SnurfQ9WU12 71 aa13.49□□□□□ -0.25
Ssbp4-205ENSMUST00000210369 Serp1Q9Z1W5 66 aa13.47□□□□□ -0.25
Ssbp4-205ENSMUST00000210369 Abca13Q5SSE9 5034 aa13.46□□□□□ -0.25
Ssbp4-205ENSMUST00000210369 Lce1mQ9CR91 182 aa13.46□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Coa5Q99M07 74 aa13.43□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Lrp1Q91ZX7 4545 aaKnown RBP13.42□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Chtf8P0CG14 533 aa13.42□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Fat3Q8BNA6 4555 aa13.42□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Dnhd1D3Z2X2 4750 aa13.41□□□□□ -0.26
Ssbp4-205ENSMUST00000210369 Gm10160F6Y577 67 aa13.35□□□□□ -0.27
Ssbp4-205ENSMUST00000210369 Brk1Q91VR8 75 aa13.33□□□□□ -0.28
Ssbp4-205ENSMUST00000210369 Cdc42se1Q8BHL7 80 aa13.32□□□□□ -0.28
Ssbp4-205ENSMUST00000210369 Gm26620Q9CY65 116 aa13.32□□□□□ -0.28
Ssbp4-205ENSMUST00000210369 Gm10643Q3URG9 111 aa13.25□□□□□ -0.29
Ssbp4-205ENSMUST00000210369 HydinQ80W93 5154 aa13.25□□□□□ -0.29
Ssbp4-205ENSMUST00000210369 PcloQ9QYX7 5068 aa13.24□□□□□ -0.29
Ssbp4-205ENSMUST00000210369 Mycbp2Q7TPH6 4711 aa13.18□□□□□ -0.3
Ssbp4-205ENSMUST00000210369 D6Ertd527eA0A0N4SWI3 464 aa13.16□□□□□ -0.3
Ssbp4-205ENSMUST00000210369 Gm11939A2A592 99 aa13.13□□□□□ -0.31
Ssbp4-205ENSMUST00000210369 Defb38Q7TNV7 63 aa13.11□□□□□ -0.31
Ssbp4-205ENSMUST00000210369 A530084C06RikQ3UTW2 186 aa13.08□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Krtap3-2Q9D638 99 aa13.07□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Krtap3-3Q9D7P0 99 aa13.07□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Gm10197F6QEY5 67 aa13.06□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Gm21798J3QNU5 87 aa13.05□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 H2al1aQ5M8Q2 105 aa13.05□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Gm18596A0A1W2P860 280 aa13.04□□□□□ -0.32
Ssbp4-205ENSMUST00000210369 Gm9736A0A1W2P7N1 277 aa12.99□□□□□ -0.33
Ssbp4-205ENSMUST00000210369 Gm5767A0A0J9YTU8 78 aa12.99□□□□□ -0.33
Ssbp4-205ENSMUST00000210369 Gm10999F6Q4M4 69 aa12.99□□□□□ -0.33
Ssbp4-205ENSMUST00000210369 A930033H14RikG5E8X6 103 aa12.97□□□□□ -0.33
Ssbp4-205ENSMUST00000210369 Phxr4P15974 95 aa12.95□□□□□ -0.34
Ssbp4-205ENSMUST00000210369 Q8BGJ3 129 aa12.95□□□□□ -0.34
Ssbp4-205ENSMUST00000210369 2310034C09RikQ9D746 214 aa12.89□□□□□ -0.35
Ssbp4-205ENSMUST00000210369 Herc1E9PZP8 4859 aa12.85□□□□□ -0.35
Ssbp4-205ENSMUST00000210369 Gm4491E0CX42 125 aa12.85□□□□□ -0.35
Ssbp4-205ENSMUST00000210369 4930507D05RikQ8C9C9 103 aa12.84□□□□□ -0.35
Ssbp4-205ENSMUST00000210369 Lrp2A2ARV4 4660 aa12.83□□□□□ -0.36
Ssbp4-205ENSMUST00000210369 2310079G19RikQ9D6L6 185 aa12.83□□□□□ -0.36
Ssbp4-205ENSMUST00000210369 Gm20661K7N787 53 aa12.82□□□□□ -0.36
Ssbp4-205ENSMUST00000210369 H2al1eQ810S6 105 aa12.82□□□□□ -0.36
Ssbp4-205ENSMUST00000210369 SvipQ3UZP4 77 aa12.81□□□□□ -0.36
Ssbp4-205ENSMUST00000210369 9230102O04RikA2ASX7 82 aa12.68□□□□□ -0.38
Ssbp4-205ENSMUST00000210369 Gm5965D3Z724 196 aa12.68□□□□□ -0.38
Ssbp4-205ENSMUST00000210369 H2al1bA0A087WP11 105 aa12.67□□□□□ -0.38
Ssbp4-205ENSMUST00000210369 Ndufb1P0DN34 57 aa12.67□□□□□ -0.38
Ssbp4-205ENSMUST00000210369 SptssbQ925E8 76 aa12.65□□□□□ -0.39
Ssbp4-205ENSMUST00000210369 Rpl37Q9D823 97 aa12.64□□□□□ -0.39
Ssbp4-205ENSMUST00000210369 Uqcr11Q9CPX8 56 aa12.63□□□□□ -0.39
Ssbp4-205ENSMUST00000210369 Limd2Q8BGB5 128 aa12.62□□□□□ -0.39
Ssbp4-205ENSMUST00000210369 Sox16Q62247 57 aa12.58□□□□□ -0.4
Ssbp4-205ENSMUST00000210369 Gm10337F7DEP7 55 aa12.58□□□□□ -0.4
Ssbp4-205ENSMUST00000210369 Krtap15-1Q9QZU5 150 aa12.55□□□□□ -0.4
Ssbp4-205ENSMUST00000210369 Rnase13Q5GAM7 153 aa12.53□□□□□ -0.4
Ssbp4-205ENSMUST00000210369 Gm9821Q8K076 103 aa12.51□□□□□ -0.41
Ssbp4-205ENSMUST00000210369 H2al1kJ3QP08 105 aa12.49□□□□□ -0.41
Ssbp4-205ENSMUST00000210369 H2al1mQ9DAD9 105 aa12.49□□□□□ -0.41
Ssbp4-205ENSMUST00000210369 Prm1P02319 51 aa12.48□□□□□ -0.41
Ssbp4-205ENSMUST00000210369 Defb1P56386 69 aa12.44□□□□□ -0.42
Ssbp4-205ENSMUST00000210369 Gm7735D3YX18 52 aa12.39□□□□□ -0.43
Ssbp4-205ENSMUST00000210369 Gm17416Q30KP4 66 aa12.35□□□□□ -0.43
Ssbp4-205ENSMUST00000210369 Gm9789Q8BIG3 52 aa12.34□□□□□ -0.43
Ssbp4-205ENSMUST00000210369 4933415A04RikQ9D443 101 aa12.33□□□□□ -0.44
Ssbp4-205ENSMUST00000210369 Ush2AQ2QI47 5193 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms