RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Gm28051J3QMA2 81 aa6.94□□□□□ -1.3
Chfr-212ENSMUST00000200038 Krtap4-1Q3UUY3 169 aa6.94□□□□□ -1.3
Chfr-212ENSMUST00000200038 Defa21Q8C1P2 93 aa6.94□□□□□ -1.3
Chfr-212ENSMUST00000200038 Rnf213E9Q555 5152 aaKnown RBP6.92□□□□□ -1.3
Chfr-212ENSMUST00000200038 Ube2v1Q9CZY3 147 aa6.92□□□□□ -1.3
Chfr-212ENSMUST00000200038 Igkv8-19A0A0G2JFN8 121 aa6.91□□□□□ -1.3
Chfr-212ENSMUST00000200038 1700042G07RikB1AUF7 90 aa6.91□□□□□ -1.3
Chfr-212ENSMUST00000200038 Rbm3O89086 153 aaKnown RBP6.91□□□□□ -1.3
Chfr-212ENSMUST00000200038 Gm10061D3Z714 54 aa6.9□□□□□ -1.3
Chfr-212ENSMUST00000200038 Fam229aB2KGE5 128 aa6.89□□□□□ -1.31
Chfr-212ENSMUST00000200038 Gm10308Q9CVR5 141 aa6.88□□□□□ -1.31
Chfr-212ENSMUST00000200038 Gm44790A0A0N4SV91 103 aa6.87□□□□□ -1.31
Chfr-212ENSMUST00000200038 Scgb1b2O35176 93 aa6.87□□□□□ -1.31
Chfr-212ENSMUST00000200038 BikO70337 150 aa6.86□□□□□ -1.31
Chfr-212ENSMUST00000200038 UqcrqQ9CQ69 82 aa6.86□□□□□ -1.31
Chfr-212ENSMUST00000200038 Tmem213Q08EA8 116 aa6.85□□□□□ -1.31
Chfr-212ENSMUST00000200038 Q9DAA3 117 aa6.85□□□□□ -1.31
Chfr-212ENSMUST00000200038 Igkv8-27A0A0G2JF28 120 aa6.84□□□□□ -1.31
Chfr-212ENSMUST00000200038 Cox7cP17665 63 aa6.84□□□□□ -1.31
Chfr-212ENSMUST00000200038 Rnase13Q5GAM7 153 aa6.84□□□□□ -1.31
Chfr-212ENSMUST00000200038 Apoc4Q61268 124 aa6.84□□□□□ -1.31
Chfr-212ENSMUST00000200038 Krtap19-3Q925H6 87 aa6.84□□□□□ -1.31
Chfr-212ENSMUST00000200038 Gm10135F6TEE5 83 aa6.83□□□□□ -1.32
Chfr-212ENSMUST00000200038 7530416G11RikJ3QJX6 159 aa6.83□□□□□ -1.32
Chfr-212ENSMUST00000200038 Krtap16-3Q8C1I6 86 aa6.83□□□□□ -1.32
Chfr-212ENSMUST00000200038 Gm10318A0A1W2P728 225 aa6.82□□□□□ -1.32
Chfr-212ENSMUST00000200038 Pde6gP09174 87 aa6.82□□□□□ -1.32
Chfr-212ENSMUST00000200038 NrepQ07475 68 aa6.82□□□□□ -1.32
Chfr-212ENSMUST00000200038 Krtap19-1Q925H2 87 aa6.81□□□□□ -1.32
Chfr-212ENSMUST00000200038 Defb13Q8R2I4 64 aa6.8□□□□□ -1.32
Chfr-212ENSMUST00000200038 Mrpl34Q99N91 92 aa6.8□□□□□ -1.32
Chfr-212ENSMUST00000200038 Gm11569B1AQB1 180 aa6.79□□□□□ -1.32
Chfr-212ENSMUST00000200038 Krtap4-2B1AQ85 167 aa6.75□□□□□ -1.33
Chfr-212ENSMUST00000200038 Gm11027G8JL69 66 aa6.75□□□□□ -1.33
Chfr-212ENSMUST00000200038 Reg3aO09037 175 aa6.75□□□□□ -1.33
Chfr-212ENSMUST00000200038 Krtap1-4Q3V2D6 188 aa6.75□□□□□ -1.33
Chfr-212ENSMUST00000200038 Spink13Q3UTS8 97 aa6.73□□□□□ -1.33
Chfr-212ENSMUST00000200038 Lyrm7Q9DA03 104 aa6.72□□□□□ -1.33
Chfr-212ENSMUST00000200038 Gm10267M0QWD8 85 aa6.71□□□□□ -1.34
Chfr-212ENSMUST00000200038 Gm37013Q8K491 104 aa6.71□□□□□ -1.34
Chfr-212ENSMUST00000200038 Gm28539A0A087WSL9 92 aa6.68□□□□□ -1.34
Chfr-212ENSMUST00000200038 Chtf8P0CG14 533 aa6.68□□□□□ -1.34
Chfr-212ENSMUST00000200038 MturnQ8CGA4 131 aa6.68□□□□□ -1.34
Chfr-212ENSMUST00000200038 BtcQ05928 177 aa6.66□□□□□ -1.34
Chfr-212ENSMUST00000200038 Ormdl1Q921I0 153 aa6.63□□□□□ -1.35
Chfr-212ENSMUST00000200038 Lce1gQ9D195 139 aa6.63□□□□□ -1.35
Chfr-212ENSMUST00000200038 Xcl1P47993 114 aa6.61□□□□□ -1.35
Chfr-212ENSMUST00000200038 Gm17416Q30KP4 66 aa6.59□□□□□ -1.35
Chfr-212ENSMUST00000200038 A0A286YCQ8 80 aa6.54□□□□□ -1.36
Chfr-212ENSMUST00000200038 MplkipQ9D011 178 aa6.54□□□□□ -1.36
Chfr-212ENSMUST00000200038 SspoQ8CG65 4998 aa6.54□□□□□ -1.36
Chfr-212ENSMUST00000200038 Gm26920S4R2A5 56 aa6.53□□□□□ -1.36
Chfr-212ENSMUST00000200038 Krtap3-2Q9D638 99 aa6.51□□□□□ -1.37
Chfr-212ENSMUST00000200038 Krtap3-3Q9D7P0 99 aa6.51□□□□□ -1.37
Chfr-212ENSMUST00000200038 Ubl5Q9EPV8 73 aa6.51□□□□□ -1.37
Chfr-212ENSMUST00000200038 Gm4491E0CX42 125 aa6.5□□□□□ -1.37
Chfr-212ENSMUST00000200038 Gm26602M0QWA4 95 aa6.5□□□□□ -1.37
Chfr-212ENSMUST00000200038 Tax1bp3Q9DBG9 124 aa6.5□□□□□ -1.37
Chfr-212ENSMUST00000200038 Gm11555B1AQ89 175 aa6.48□□□□□ -1.37
Chfr-212ENSMUST00000200038 Naa38Q9D2U5 125 aa6.46□□□□□ -1.38
Chfr-212ENSMUST00000200038 B930094E09RikQ8C4T2 136 aa6.45□□□□□ -1.38
Chfr-212ENSMUST00000200038 Gm11563B1AQ90 168 aa6.44□□□□□ -1.38
Chfr-212ENSMUST00000200038 Krtap13-1Q8K198 168 aa6.44□□□□□ -1.38
Chfr-212ENSMUST00000200038 Krtap4-7Q9D732 168 aa6.44□□□□□ -1.38
Chfr-212ENSMUST00000200038 9230102O04RikA2ASX7 82 aa6.41□□□□□ -1.38
Chfr-212ENSMUST00000200038 Syne2Q6ZWQ0 6874 aaKnown RBP6.4□□□□□ -1.38
Chfr-212ENSMUST00000200038 Mtatp8P03930 67 aa6.39□□□□□ -1.39
Chfr-212ENSMUST00000200038 Trav3-1Q5R1I8 114 aa6.39□□□□□ -1.39
Chfr-212ENSMUST00000200038 Prr15lQ8JZM2 100 aa6.38□□□□□ -1.39
Chfr-212ENSMUST00000200038 A0A286YE49 62 aa6.37□□□□□ -1.39
Chfr-212ENSMUST00000200038 Gm11596B1AQB0 205 aa6.36□□□□□ -1.39
Chfr-212ENSMUST00000200038 Samd13D3YUG0 102 aa6.36□□□□□ -1.39
Chfr-212ENSMUST00000200038 Krtap1-5A2A590 122 aa6.33□□□□□ -1.4
Chfr-212ENSMUST00000200038 2210017I01RikA0A0A6YVV1 95 aa6.32□□□□□ -1.4
Chfr-212ENSMUST00000200038 Fam229bQ8CF36 80 aa6.31□□□□□ -1.4
Chfr-212ENSMUST00000200038 Tmem254aP0DN89 123 aa6.29□□□□□ -1.4
Chfr-212ENSMUST00000200038 Tmem254bP0DN90 123 aa6.29□□□□□ -1.4
Chfr-212ENSMUST00000200038 Tmem254cP0DN91 123 aa6.29□□□□□ -1.4
Chfr-212ENSMUST00000200038 Q8BGJ3 129 aa6.29□□□□□ -1.4
Chfr-212ENSMUST00000200038 Gm10999F6Q4M4 69 aa6.26□□□□□ -1.41
Chfr-212ENSMUST00000200038 Krtap4-6Q3V4B7 195 aa6.26□□□□□ -1.41
Chfr-212ENSMUST00000200038 Spink8Q09TK9 105 aa6.24□□□□□ -1.41
Chfr-212ENSMUST00000200038 2310079G19RikQ9D6L6 185 aa6.22□□□□□ -1.41
Chfr-212ENSMUST00000200038 Krtap9-5A2A5X3 358 aa6.21□□□□□ -1.42
Chfr-212ENSMUST00000200038 BatfO35284 125 aa6.19□□□□□ -1.42
Chfr-212ENSMUST00000200038 Muc5bE9Q5I3 4800 aa6.18□□□□□ -1.42
Chfr-212ENSMUST00000200038 Gm19426M0QWC7 77 aa6.18□□□□□ -1.42
Chfr-212ENSMUST00000200038 1700074P13RikQ9D9G7 251 aa6.18□□□□□ -1.42
Chfr-212ENSMUST00000200038 Hist1h4aP62806 103 aaKnown RBP6.17□□□□□ -1.42
Chfr-212ENSMUST00000200038 4930507D05RikQ8C9C9 103 aa6.17□□□□□ -1.42
Chfr-212ENSMUST00000200038 Krtap19-2Q925I0 141 aa6.17□□□□□ -1.42
Chfr-212ENSMUST00000200038 Lce1jD3YUU5 139 aa6.15□□□□□ -1.42
Chfr-212ENSMUST00000200038 Pcp4l1Q6W8Q3 68 aa6.14□□□□□ -1.43
Chfr-212ENSMUST00000200038 Pla2g10Q9QXX3 151 aa6.14□□□□□ -1.43
Chfr-212ENSMUST00000200038 Defb38Q7TNV7 63 aa6.11□□□□□ -1.43
Chfr-212ENSMUST00000200038 Spint4Q9D263 159 aa6.11□□□□□ -1.43
Chfr-212ENSMUST00000200038 Gtf2h5Q8K2X8 71 aa6.09□□□□□ -1.43
Chfr-212ENSMUST00000200038 Krtap12-1Q9Z287 130 aa6.09□□□□□ -1.43
Chfr-212ENSMUST00000200038 Mdn1A2ANY6 5589 aaKnown RBP6.08□□□□□ -1.44
Chfr-212ENSMUST00000200038 Gm11564A2A4L9 201 aa6.01□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 136.8 ms