RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Gm35339A0A140LHH9 1649 aa29.41■■■□□ 2.3
Chfr-212ENSMUST00000200038 NischQ80TM9 1593 aa29.19■■■□□ 2.26
Chfr-212ENSMUST00000200038 Abcc8B2RUS7 1588 aa28.24■■■□□ 2.11
Chfr-212ENSMUST00000200038 Abcc9P70170 1546 aa28.14■■■□□ 2.1
Chfr-212ENSMUST00000200038 ScribQ80U72 1612 aa27.18■■□□□ 1.94
Chfr-212ENSMUST00000200038 NacadQ5SWP3 1504 aa26.55■■□□□ 1.84
Chfr-212ENSMUST00000200038 Kdm5dQ62240 1548 aa26.37■■□□□ 1.81
Chfr-212ENSMUST00000200038 Sycp2Q9CUU3 1500 aa25.98■■□□□ 1.75
Chfr-212ENSMUST00000200038 Dcaf1Q80TR8 1506 aa25.94■■□□□ 1.74
Chfr-212ENSMUST00000200038 BicraF8VPZ9 1578 aa25.53■■□□□ 1.68
Chfr-212ENSMUST00000200038 Rhox8Q6VSS7 320 aa25.39■■□□□ 1.66
Chfr-212ENSMUST00000200038 Rb1cc1Q9ESK9 1588 aa25.38■■□□□ 1.65
Chfr-212ENSMUST00000200038 Dnajc5bQ9CQ94 199 aa25.32■■□□□ 1.64
Chfr-212ENSMUST00000200038 Pds5bQ4VA53 1446 aaKnown RBP25.12■■□□□ 1.61
Chfr-212ENSMUST00000200038 Crybg2B7ZCC2 1516 aa25.04■■□□□ 1.6
Chfr-212ENSMUST00000200038 Baz1aO88379 1555 aa25.03■■□□□ 1.6
Chfr-212ENSMUST00000200038 Zcchc6Q5BLK4 1491 aaKnown RBP24.85■■□□□ 1.57
Chfr-212ENSMUST00000200038 Ccdc180J3QNE4 1664 aa24.82■■□□□ 1.56
Chfr-212ENSMUST00000200038 Atad2bE9Q166 1460 aaKnown RBP24.79■■□□□ 1.56
Chfr-212ENSMUST00000200038 Thoc2B1AZI6 1594 aaKnown RBP24.72■■□□□ 1.55
Chfr-212ENSMUST00000200038 Ercc6F8VPZ5 1481 aa24.56■■□□□ 1.52
Chfr-212ENSMUST00000200038 Smarca4Q3TKT4 1613 aaKnown RBP24.41■■□□□ 1.5
Chfr-212ENSMUST00000200038 Smarca2Q6DIC0 1577 aa24.41■■□□□ 1.5
Chfr-212ENSMUST00000200038 Cc2d2aQ8CFW7 1633 aa24.39■■□□□ 1.5
Chfr-212ENSMUST00000200038 Cecr2E9Q2Z1 1453 aa24.32■■□□□ 1.48
Chfr-212ENSMUST00000200038 Iqgap2Q3UQ44 1575 aa24.29■■□□□ 1.48
Chfr-212ENSMUST00000200038 Phldb1Q6PDH0 1371 aaKnown RBP24.2■■□□□ 1.46
Chfr-212ENSMUST00000200038 Fam135aQ6NS59 1506 aa24.19■■□□□ 1.46
Chfr-212ENSMUST00000200038 Frmpd1A2AKB4 1549 aa24.13■■□□□ 1.45
Chfr-212ENSMUST00000200038 Wdr62Q3U3T8 1523 aa24.11■■□□□ 1.45
Chfr-212ENSMUST00000200038 Ubl4bQ9CQ84 188 aa24.1■■□□□ 1.45
Chfr-212ENSMUST00000200038 Baz1bQ9Z277 1479 aa24.03■■□□□ 1.44
Chfr-212ENSMUST00000200038 CftrP26361 1476 aa23.77■■□□□ 1.4
Chfr-212ENSMUST00000200038 Ccdc136Q3TVA9 1136 aa23.77■■□□□ 1.4
Chfr-212ENSMUST00000200038 Brd4Q9ESU6 1400 aaKnown RBP23.76■■□□□ 1.39
Chfr-212ENSMUST00000200038 Mrc2Q64449 1479 aa23.75■■□□□ 1.39
Chfr-212ENSMUST00000200038 Esf1Q3V1V3 845 aaKnown RBP23.66■■□□□ 1.38
Chfr-212ENSMUST00000200038 Cttnbp2B9EJA2 1648 aa23.62■■□□□ 1.37
Chfr-212ENSMUST00000200038 Synj1Q8CHC4 1574 aa23.61■■□□□ 1.37
Chfr-212ENSMUST00000200038 Rtl1Q7M732 1744 aa23.51■■□□□ 1.35
Chfr-212ENSMUST00000200038 Unc13aQ4KUS2 1712 aa23.47■■□□□ 1.35
Chfr-212ENSMUST00000200038 Trim41Q5NCC3 630 aa23.45■■□□□ 1.34
Chfr-212ENSMUST00000200038 Rsf1E9PWW9 1441 aaKnown RBP23.39■■□□□ 1.33
Chfr-212ENSMUST00000200038 Kif15Q6P9L6 1387 aa23.37■■□□□ 1.33
Chfr-212ENSMUST00000200038 Cux2P70298 1426 aa23.36■■□□□ 1.33
Chfr-212ENSMUST00000200038 Npm1Q61937 292 aaKnown RBP23.29■■□□□ 1.32
Chfr-212ENSMUST00000200038 Dnajc5P60904 198 aa23.21■■□□□ 1.31
Chfr-212ENSMUST00000200038 Lrriq1Q0P5X1 1673 aa23.07■■□□□ 1.28
Chfr-212ENSMUST00000200038 Cep164Q5DU05 1446 aa23.07■■□□□ 1.28
Chfr-212ENSMUST00000200038 Lamc3Q9R0B6 1581 aa23.04■■□□□ 1.28
Chfr-212ENSMUST00000200038 Il27Q8K3I6 234 aa22.99■■□□□ 1.27
Chfr-212ENSMUST00000200038 Kif21aQ9QXL2 1672 aa22.97■■□□□ 1.27
Chfr-212ENSMUST00000200038 Cngb1E1AZ71 1325 aa22.91■■□□□ 1.26
Chfr-212ENSMUST00000200038 Ccdc18Q640L5 1455 aa22.9■■□□□ 1.26
Chfr-212ENSMUST00000200038 Dhx29Q6PGC1 1365 aaKnown RBP22.86■■□□□ 1.25
Chfr-212ENSMUST00000200038 LrpprcQ6PB66 1392 aaKnown RBP22.81■■□□□ 1.24
Chfr-212ENSMUST00000200038 Golga3P55937 1487 aa22.8■■□□□ 1.24
Chfr-212ENSMUST00000200038 Urb2E9Q7L1 1524 aaKnown RBP22.8■■□□□ 1.24
Chfr-212ENSMUST00000200038 Eif4g3Q80XI3 1579 aaKnown RBP22.77■■□□□ 1.24
Chfr-212ENSMUST00000200038 Plb1Q3TTY0 1478 aa22.77■■□□□ 1.24
Chfr-212ENSMUST00000200038 Shroom2A2ALU4 1481 aa22.71■■□□□ 1.23
Chfr-212ENSMUST00000200038 Pabpn1Q8CCS6 302 aaKnown RBP22.68■■□□□ 1.22
Chfr-212ENSMUST00000200038 TnnQ80Z71 1560 aa22.65■■□□□ 1.22
Chfr-212ENSMUST00000200038 Camsap1A2AHC3 1581 aa22.6■■□□□ 1.21
Chfr-212ENSMUST00000200038 PogzQ8BZH4 1409 aaKnown RBP22.59■■□□□ 1.21
Chfr-212ENSMUST00000200038 Crocc2F6XLV1 1638 aa22.59■■□□□ 1.21
Chfr-212ENSMUST00000200038 Top2bQ64511 1612 aa22.58■■□□□ 1.21
Chfr-212ENSMUST00000200038 Ift140E9PY46 1464 aa22.58■■□□□ 1.2
Chfr-212ENSMUST00000200038 Fmn1Q05860 1466 aa22.57■■□□□ 1.2
Chfr-212ENSMUST00000200038 Pelp1Q9DBD5 1123 aaKnown RBP22.55■■□□□ 1.2
Chfr-212ENSMUST00000200038 Duox2A2AQ99 1517 aa22.47■■□□□ 1.19
Chfr-212ENSMUST00000200038 Col17a1Q07563 1470 aa22.43■■□□□ 1.18
Chfr-212ENSMUST00000200038 Rusc2Q80U22 1514 aa22.41■■□□□ 1.18
Chfr-212ENSMUST00000200038 Grin2bQ01097 1482 aa22.36■■□□□ 1.17
Chfr-212ENSMUST00000200038 Disp1Q3TDN0 1521 aa22.35■■□□□ 1.17
Chfr-212ENSMUST00000200038 Efcab5A0JP43 1406 aa22.32■■□□□ 1.16
Chfr-212ENSMUST00000200038 Cc2d2bA0A286YDU8 1405 aa22.31■■□□□ 1.16
Chfr-212ENSMUST00000200038 Nup160Q9Z0W3 1402 aaKnown RBP22.23■■□□□ 1.15
Chfr-212ENSMUST00000200038 Rad54l2Q99NG0 1466 aa22.15■■□□□ 1.14
Chfr-212ENSMUST00000200038 Fgd6Q69ZL1 1399 aa22.14■■□□□ 1.14
Chfr-212ENSMUST00000200038 Samd9lQ69Z37 1561 aa22.14■■□□□ 1.13
Chfr-212ENSMUST00000200038 Zcchc11B2RX14 1644 aaKnown RBP22.13■■□□□ 1.13
Chfr-212ENSMUST00000200038 Pbrm1Q8BSQ9 1634 aaKnown RBP22.11■■□□□ 1.13
Chfr-212ENSMUST00000200038 Zeb1Q64318 1117 aa22.1■■□□□ 1.13
Chfr-212ENSMUST00000200038 NrkQ9R0G8 1455 aa22.09■■□□□ 1.13
Chfr-212ENSMUST00000200038 Ccdc88bQ4QRL3 1481 aa22.09■■□□□ 1.13
Chfr-212ENSMUST00000200038 Grin2aP35436 1464 aa22.08■■□□□ 1.12
Chfr-212ENSMUST00000200038 AqrQ8CFQ3 1481 aaKnown RBP22.07■■□□□ 1.12
Chfr-212ENSMUST00000200038 Ttbk1Q6PCN3 1308 aa22.06■■□□□ 1.12
Chfr-212ENSMUST00000200038 Chic1Q8CBW7 227 aa22.04■■□□□ 1.12
Chfr-212ENSMUST00000200038 PtprkP35822 1457 aa22.03■■□□□ 1.12
Chfr-212ENSMUST00000200038 Magi3Q9EQJ9 1476 aa22.01■■□□□ 1.11
Chfr-212ENSMUST00000200038 Gm156Q58A37 223 aa21.99■■□□□ 1.11
Chfr-212ENSMUST00000200038 Top2aQ01320 1528 aaKnown RBP21.99■■□□□ 1.11
Chfr-212ENSMUST00000200038 AknaQ80VW7 1404 aa21.97■■□□□ 1.11
Chfr-212ENSMUST00000200038 Adgrl3Q80TS3 1537 aa21.97■■□□□ 1.11
Chfr-212ENSMUST00000200038 Shroom4Q1W617 1475 aa21.96■■□□□ 1.11
Chfr-212ENSMUST00000200038 Gapvd1Q6PAR5 1458 aa21.94■■□□□ 1.1
Chfr-212ENSMUST00000200038 CadpsQ80TJ1 1355 aa21.92■■□□□ 1.1
Chfr-212ENSMUST00000200038 Npm2Q80W85 207 aa21.91■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms