RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 FlncQ8VHX6 2726 aaKnown RBP10.11□□□□□ -0.79
Smarcc1-207ENSMUST00000199896 Dchs2A0A0A6YW72 3346 aa10.09□□□□□ -0.79
Smarcc1-207ENSMUST00000199896 ApcQ61315 2845 aa10.04□□□□□ -0.8
Smarcc1-207ENSMUST00000199896 4933415A04RikQ9D443 101 aa10.04□□□□□ -0.8
Smarcc1-207ENSMUST00000199896 Cox6b2Q80ZN9 88 aa10.03□□□□□ -0.8
Smarcc1-207ENSMUST00000199896 Celsr2Q9R0M0 2920 aa10.02□□□□□ -0.81
Smarcc1-207ENSMUST00000199896 Brca2P97929 3329 aa10.01□□□□□ -0.81
Smarcc1-207ENSMUST00000199896 DspE9Q557 2883 aaKnown RBP10□□□□□ -0.81
Smarcc1-207ENSMUST00000199896 1700042G07RikB1AUF7 90 aa9.92□□□□□ -0.82
Smarcc1-207ENSMUST00000199896 Gm5965D3Z724 196 aa9.9□□□□□ -0.82
Smarcc1-207ENSMUST00000199896 Wdfy3Q6VNB8 3508 aa9.9□□□□□ -0.82
Smarcc1-207ENSMUST00000199896 Trank1Q8BV79 2999 aa9.9□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 D6Ertd527eA0A0N4SWI3 464 aa9.89□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 Chd9Q8BYH8 2885 aa9.89□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 Pdzd2E9Q1M1 2796 aa9.89□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 Col6a3E9PWQ3 3284 aa9.88□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 Nf1Q04690 2841 aa9.87□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 2310057N15RikQ9D6T8 200 aa9.84□□□□□ -0.83
Smarcc1-207ENSMUST00000199896 DmdP11531 3678 aa9.75□□□□□ -0.85
Smarcc1-207ENSMUST00000199896 Tenm3Q9WTS6 2715 aa9.73□□□□□ -0.85
Smarcc1-207ENSMUST00000199896 SmcpP15265 143 aa9.73□□□□□ -0.85
Smarcc1-207ENSMUST00000199896 Gm21887J3QQ04 176 aa9.72□□□□□ -0.85
Smarcc1-207ENSMUST00000199896 VcanQ62059 3357 aa9.69□□□□□ -0.86
Smarcc1-207ENSMUST00000199896 Tenm1Q9WTS4 2731 aa9.65□□□□□ -0.86
Smarcc1-207ENSMUST00000199896 Dchs1E9PVD3 3291 aa9.63□□□□□ -0.87
Smarcc1-207ENSMUST00000199896 LrbaQ9ESE1 2856 aa9.61□□□□□ -0.87
Smarcc1-207ENSMUST00000199896 SpegQ62407 3262 aa9.56□□□□□ -0.88
Smarcc1-207ENSMUST00000199896 Myo15aQ9QZZ4 3511 aa9.53□□□□□ -0.88
Smarcc1-207ENSMUST00000199896 Zfhx3Q61329 3726 aa9.48□□□□□ -0.89
Smarcc1-207ENSMUST00000199896 Tenm2Q9WTS5 2764 aa9.48□□□□□ -0.89
Smarcc1-207ENSMUST00000199896 A930033H14RikG5E8X6 103 aa9.47□□□□□ -0.89
Smarcc1-207ENSMUST00000199896 Helz2E9QAM5 2947 aaKnown RBP9.46□□□□□ -0.9
Smarcc1-207ENSMUST00000199896 Tnp1P10856 55 aa9.4□□□□□ -0.9
Smarcc1-207ENSMUST00000199896 Ndufaf8A2AMZ4 74 aa9.38□□□□□ -0.91
Smarcc1-207ENSMUST00000199896 Vps13cQ8BX70 3748 aa9.37□□□□□ -0.91
Smarcc1-207ENSMUST00000199896 RelnQ60841 3461 aa9.36□□□□□ -0.91
Smarcc1-207ENSMUST00000199896 Muc5acE9QAQ8 3455 aa9.3□□□□□ -0.92
Smarcc1-207ENSMUST00000199896 Gm9736A0A1W2P7N1 277 aa9.28□□□□□ -0.92
Smarcc1-207ENSMUST00000199896 Gm20537G3UYK7 97 aa9.28□□□□□ -0.92
Smarcc1-207ENSMUST00000199896 Megf8P60882 2789 aa9.22□□□□□ -0.93
Smarcc1-207ENSMUST00000199896 B930094E09RikQ8C4T2 136 aa9.18□□□□□ -0.94
Smarcc1-207ENSMUST00000199896 Gm40193A0A1B0GT39 78 aa9.18□□□□□ -0.94
Smarcc1-207ENSMUST00000199896 Akap9Q70FJ1 3797 aa9.18□□□□□ -0.94
Smarcc1-207ENSMUST00000199896 OtogO55225 2910 aa9.15□□□□□ -0.94
Smarcc1-207ENSMUST00000199896 Zfhx4Q9JJN2 3550 aa9.11□□□□□ -0.95
Smarcc1-207ENSMUST00000199896 2310079G19RikQ9D6L6 185 aa9.1□□□□□ -0.95
Smarcc1-207ENSMUST00000199896 Gm17416Q30KP4 66 aa9.08□□□□□ -0.96
Smarcc1-207ENSMUST00000199896 Gm884A2A9H6 3643 aa9.06□□□□□ -0.96
Smarcc1-207ENSMUST00000199896 VwfQ8CIZ8 2813 aa9.02□□□□□ -0.97
Smarcc1-207ENSMUST00000199896 Gm9112A2AI92 75 aa9□□□□□ -0.97
Smarcc1-207ENSMUST00000199896 Gm9918Q8BUR5 174 aa8.99□□□□□ -0.97
Smarcc1-207ENSMUST00000199896 2210017I01RikA0A0A6YVV1 95 aa8.93□□□□□ -0.98
Smarcc1-207ENSMUST00000199896 Lama5Q61001 3718 aa8.9□□□□□ -0.98
Smarcc1-207ENSMUST00000199896 SpenQ62504 3644 aaKnown RBP8.88□□□□□ -0.99
Smarcc1-207ENSMUST00000199896 Gm10318A0A1W2P728 225 aa8.87□□□□□ -0.99
Smarcc1-207ENSMUST00000199896 Smg1Q8BKX6 3658 aaKnown RBP8.84□□□□□ -0.99
Smarcc1-207ENSMUST00000199896 Prm2P07978 107 aa8.83□□□□□ -1
Smarcc1-207ENSMUST00000199896 Col7a1Q63870 2944 aa8.79□□□□□ -1
Smarcc1-207ENSMUST00000199896 Csmd1Q923L3 3564 aa8.78□□□□□ -1
Smarcc1-207ENSMUST00000199896 Fbn1Q61554 2873 aaKnown RBP8.73□□□□□ -1.01
Smarcc1-207ENSMUST00000199896 Krtap19-5O08632 62 aa8.72□□□□□ -1.01
Smarcc1-207ENSMUST00000199896 Crct1Q6PAI5 102 aa8.7□□□□□ -1.02
Smarcc1-207ENSMUST00000199896 Gm17402F6Z0L5 76 aa8.69□□□□□ -1.02
Smarcc1-207ENSMUST00000199896 Gm11939A2A592 99 aa8.66□□□□□ -1.02
Smarcc1-207ENSMUST00000199896 Krtap13-1Q8K198 168 aa8.55□□□□□ -1.04
Smarcc1-207ENSMUST00000199896 Gm19668J3QMD1 248 aa8.53□□□□□ -1.04
Smarcc1-207ENSMUST00000199896 Svep1A2AVA0 3567 aa8.52□□□□□ -1.05
Smarcc1-207ENSMUST00000199896 Muc6Q80T03 2850 aa8.42□□□□□ -1.06
Smarcc1-207ENSMUST00000199896 Cmya5Q70KF4 3739 aa8.35□□□□□ -1.07
Smarcc1-207ENSMUST00000199896 Muc4Q8JZM8 3443 aa8.26□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 4933428G20RikQ9D3X4 101 aa8.26□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 Ank2Q8C8R3 3898 aa8.26□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 Krtap3-1A2A591 98 aa8.25□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 Krtap3-2Q9D638 99 aa8.25□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 Krtap3-3Q9D7P0 99 aa8.25□□□□□ -1.09
Smarcc1-207ENSMUST00000199896 Csmd2V9GX34 3611 aa8.02□□□□□ -1.13
Smarcc1-207ENSMUST00000199896 LystP97412 3788 aa8.01□□□□□ -1.13
Smarcc1-207ENSMUST00000199896 Gm6358A0A087WPH4 74 aa7.93□□□□□ -1.14
Smarcc1-207ENSMUST00000199896 Dnah14A0A140LIJ4 4489 aa7.89□□□□□ -1.15
Smarcc1-207ENSMUST00000199896 Gm18596A0A1W2P860 280 aa7.86□□□□□ -1.15
Smarcc1-207ENSMUST00000199896 BsnO88737 3942 aa7.8□□□□□ -1.16
Smarcc1-207ENSMUST00000199896 Huwe1Q7TMY8 4377 aaKnown RBP7.79□□□□□ -1.16
Smarcc1-207ENSMUST00000199896 LorP18165 486 aa7.77□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Krtap1-5A2A590 122 aa7.76□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Xirp2Q4U4S6 3784 aa7.73□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Krtap8-1O08633 61 aa7.73□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Krtap19-9aF8WH65 55 aa7.72□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Dnah10D3YYQ8 4591 aa7.72□□□□□ -1.17
Smarcc1-207ENSMUST00000199896 Dnah5Q8VHE6 4621 aa7.69□□□□□ -1.18
Smarcc1-207ENSMUST00000199896 CubnQ9JLB4 3623 aa7.67□□□□□ -1.18
Smarcc1-207ENSMUST00000199896 Sprr2a3Q4KL71 83 aa7.65□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Sprr2a1Q9CQK8 83 aa7.65□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Sprr2kO70562 68 aa7.63□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Krtap7-1Q9D3I6 87 aa7.62□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Krtap1-4Q3V2D6 188 aa7.61□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Stard9Q80TF6 4561 aa7.6□□□□□ -1.19
Smarcc1-207ENSMUST00000199896 Gm19402J3QJV4 266 aa7.56□□□□□ -1.2
Smarcc1-207ENSMUST00000199896 PlecQ9QXS1 4691 aaKnown RBP7.51□□□□□ -1.21
Smarcc1-207ENSMUST00000199896 Vps13dB1ART2 4390 aa7.49□□□□□ -1.21
Smarcc1-207ENSMUST00000199896 Krtap19-9bQ99NG9 58 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms