RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 FlncQ8VHX6 2726 aaKnown RBP10,11□□□□□ -0,79
Smarcc1-207ENSMUST00000199896 Dchs2A0A0A6YW72 3346 aa10,09□□□□□ -0,79
Smarcc1-207ENSMUST00000199896 ApcQ61315 2845 aa10,04□□□□□ -0,8
Smarcc1-207ENSMUST00000199896 4933415A04RikQ9D443 101 aa10,04□□□□□ -0,8
Smarcc1-207ENSMUST00000199896 Cox6b2Q80ZN9 88 aa10,03□□□□□ -0,8
Smarcc1-207ENSMUST00000199896 Celsr2Q9R0M0 2920 aa10,02□□□□□ -0,81
Smarcc1-207ENSMUST00000199896 Brca2P97929 3329 aa10,01□□□□□ -0,81
Smarcc1-207ENSMUST00000199896 DspE9Q557 2883 aaKnown RBP10□□□□□ -0,81
Smarcc1-207ENSMUST00000199896 1700042G07RikB1AUF7 90 aa9,92□□□□□ -0,82
Smarcc1-207ENSMUST00000199896 Gm5965D3Z724 196 aa9,9□□□□□ -0,82
Smarcc1-207ENSMUST00000199896 Wdfy3Q6VNB8 3508 aa9,9□□□□□ -0,82
Smarcc1-207ENSMUST00000199896 Trank1Q8BV79 2999 aa9,9□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 D6Ertd527eA0A0N4SWI3 464 aa9,89□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 Chd9Q8BYH8 2885 aa9,89□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 Pdzd2E9Q1M1 2796 aa9,89□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 Col6a3E9PWQ3 3284 aa9,88□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 Nf1Q04690 2841 aa9,87□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 2310057N15RikQ9D6T8 200 aa9,84□□□□□ -0,83
Smarcc1-207ENSMUST00000199896 DmdP11531 3678 aa9,75□□□□□ -0,85
Smarcc1-207ENSMUST00000199896 Tenm3Q9WTS6 2715 aa9,73□□□□□ -0,85
Smarcc1-207ENSMUST00000199896 SmcpP15265 143 aa9,73□□□□□ -0,85
Smarcc1-207ENSMUST00000199896 Gm21887J3QQ04 176 aa9,72□□□□□ -0,85
Smarcc1-207ENSMUST00000199896 VcanQ62059 3357 aa9,69□□□□□ -0,86
Smarcc1-207ENSMUST00000199896 Tenm1Q9WTS4 2731 aa9,65□□□□□ -0,86
Smarcc1-207ENSMUST00000199896 Dchs1E9PVD3 3291 aa9,63□□□□□ -0,87
Smarcc1-207ENSMUST00000199896 LrbaQ9ESE1 2856 aa9,61□□□□□ -0,87
Smarcc1-207ENSMUST00000199896 SpegQ62407 3262 aa9,56□□□□□ -0,88
Smarcc1-207ENSMUST00000199896 Myo15aQ9QZZ4 3511 aa9,53□□□□□ -0,88
Smarcc1-207ENSMUST00000199896 Zfhx3Q61329 3726 aa9,48□□□□□ -0,89
Smarcc1-207ENSMUST00000199896 Tenm2Q9WTS5 2764 aa9,48□□□□□ -0,89
Smarcc1-207ENSMUST00000199896 A930033H14RikG5E8X6 103 aa9,47□□□□□ -0,89
Smarcc1-207ENSMUST00000199896 Helz2E9QAM5 2947 aaKnown RBP9,46□□□□□ -0,9
Smarcc1-207ENSMUST00000199896 Tnp1P10856 55 aa9,4□□□□□ -0,9
Smarcc1-207ENSMUST00000199896 Ndufaf8A2AMZ4 74 aa9,38□□□□□ -0,91
Smarcc1-207ENSMUST00000199896 Vps13cQ8BX70 3748 aa9,37□□□□□ -0,91
Smarcc1-207ENSMUST00000199896 RelnQ60841 3461 aa9,36□□□□□ -0,91
Smarcc1-207ENSMUST00000199896 Muc5acE9QAQ8 3455 aa9,3□□□□□ -0,92
Smarcc1-207ENSMUST00000199896 Gm9736A0A1W2P7N1 277 aa9,28□□□□□ -0,92
Smarcc1-207ENSMUST00000199896 Gm20537G3UYK7 97 aa9,28□□□□□ -0,92
Smarcc1-207ENSMUST00000199896 Megf8P60882 2789 aa9,22□□□□□ -0,93
Smarcc1-207ENSMUST00000199896 B930094E09RikQ8C4T2 136 aa9,18□□□□□ -0,94
Smarcc1-207ENSMUST00000199896 Gm40193A0A1B0GT39 78 aa9,18□□□□□ -0,94
Smarcc1-207ENSMUST00000199896 Akap9Q70FJ1 3797 aa9,18□□□□□ -0,94
Smarcc1-207ENSMUST00000199896 OtogO55225 2910 aa9,15□□□□□ -0,94
Smarcc1-207ENSMUST00000199896 Zfhx4Q9JJN2 3550 aa9,11□□□□□ -0,95
Smarcc1-207ENSMUST00000199896 2310079G19RikQ9D6L6 185 aa9,1□□□□□ -0,95
Smarcc1-207ENSMUST00000199896 Gm17416Q30KP4 66 aa9,08□□□□□ -0,96
Smarcc1-207ENSMUST00000199896 Gm884A2A9H6 3643 aa9,06□□□□□ -0,96
Smarcc1-207ENSMUST00000199896 VwfQ8CIZ8 2813 aa9,02□□□□□ -0,97
Smarcc1-207ENSMUST00000199896 Gm9112A2AI92 75 aa9□□□□□ -0,97
Smarcc1-207ENSMUST00000199896 Gm9918Q8BUR5 174 aa8,99□□□□□ -0,97
Smarcc1-207ENSMUST00000199896 2210017I01RikA0A0A6YVV1 95 aa8,93□□□□□ -0,98
Smarcc1-207ENSMUST00000199896 Lama5Q61001 3718 aa8,9□□□□□ -0,98
Smarcc1-207ENSMUST00000199896 SpenQ62504 3644 aaKnown RBP8,88□□□□□ -0,99
Smarcc1-207ENSMUST00000199896 Gm10318A0A1W2P728 225 aa8,87□□□□□ -0,99
Smarcc1-207ENSMUST00000199896 Smg1Q8BKX6 3658 aaKnown RBP8,84□□□□□ -0,99
Smarcc1-207ENSMUST00000199896 Prm2P07978 107 aa8,83□□□□□ -1
Smarcc1-207ENSMUST00000199896 Col7a1Q63870 2944 aa8,79□□□□□ -1
Smarcc1-207ENSMUST00000199896 Csmd1Q923L3 3564 aa8,78□□□□□ -1
Smarcc1-207ENSMUST00000199896 Fbn1Q61554 2873 aaKnown RBP8,73□□□□□ -1,01
Smarcc1-207ENSMUST00000199896 Krtap19-5O08632 62 aa8,72□□□□□ -1,01
Smarcc1-207ENSMUST00000199896 Crct1Q6PAI5 102 aa8,7□□□□□ -1,02
Smarcc1-207ENSMUST00000199896 Gm17402F6Z0L5 76 aa8,69□□□□□ -1,02
Smarcc1-207ENSMUST00000199896 Gm11939A2A592 99 aa8,66□□□□□ -1,02
Smarcc1-207ENSMUST00000199896 Krtap13-1Q8K198 168 aa8,55□□□□□ -1,04
Smarcc1-207ENSMUST00000199896 Gm19668J3QMD1 248 aa8,53□□□□□ -1,04
Smarcc1-207ENSMUST00000199896 Svep1A2AVA0 3567 aa8,52□□□□□ -1,05
Smarcc1-207ENSMUST00000199896 Muc6Q80T03 2850 aa8,42□□□□□ -1,06
Smarcc1-207ENSMUST00000199896 Cmya5Q70KF4 3739 aa8,35□□□□□ -1,07
Smarcc1-207ENSMUST00000199896 Muc4Q8JZM8 3443 aa8,26□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 4933428G20RikQ9D3X4 101 aa8,26□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 Ank2Q8C8R3 3898 aa8,26□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 Krtap3-1A2A591 98 aa8,25□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 Krtap3-2Q9D638 99 aa8,25□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 Krtap3-3Q9D7P0 99 aa8,25□□□□□ -1,09
Smarcc1-207ENSMUST00000199896 Csmd2V9GX34 3611 aa8,02□□□□□ -1,13
Smarcc1-207ENSMUST00000199896 LystP97412 3788 aa8,01□□□□□ -1,13
Smarcc1-207ENSMUST00000199896 Gm6358A0A087WPH4 74 aa7,93□□□□□ -1,14
Smarcc1-207ENSMUST00000199896 Dnah14A0A140LIJ4 4489 aa7,89□□□□□ -1,15
Smarcc1-207ENSMUST00000199896 Gm18596A0A1W2P860 280 aa7,86□□□□□ -1,15
Smarcc1-207ENSMUST00000199896 BsnO88737 3942 aa7,8□□□□□ -1,16
Smarcc1-207ENSMUST00000199896 Huwe1Q7TMY8 4377 aaKnown RBP7,79□□□□□ -1,16
Smarcc1-207ENSMUST00000199896 LorP18165 486 aa7,77□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Krtap1-5A2A590 122 aa7,76□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Xirp2Q4U4S6 3784 aa7,73□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Krtap8-1O08633 61 aa7,73□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Krtap19-9aF8WH65 55 aa7,72□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Dnah10D3YYQ8 4591 aa7,72□□□□□ -1,17
Smarcc1-207ENSMUST00000199896 Dnah5Q8VHE6 4621 aa7,69□□□□□ -1,18
Smarcc1-207ENSMUST00000199896 CubnQ9JLB4 3623 aa7,67□□□□□ -1,18
Smarcc1-207ENSMUST00000199896 Sprr2a3Q4KL71 83 aa7,65□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Sprr2a1Q9CQK8 83 aa7,65□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Sprr2kO70562 68 aa7,63□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Krtap7-1Q9D3I6 87 aa7,62□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Krtap1-4Q3V2D6 188 aa7,61□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Stard9Q80TF6 4561 aa7,6□□□□□ -1,19
Smarcc1-207ENSMUST00000199896 Gm19402J3QJV4 266 aa7,56□□□□□ -1,2
Smarcc1-207ENSMUST00000199896 PlecQ9QXS1 4691 aaKnown RBP7,51□□□□□ -1,21
Smarcc1-207ENSMUST00000199896 Vps13dB1ART2 4390 aa7,49□□□□□ -1,21
Smarcc1-207ENSMUST00000199896 Krtap19-9bQ99NG9 58 aa7,42□□□□□ -1,22
Retrieved 100 of 22,080 RNA–protein pairs in 10,8 ms