RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 H2al1aQ5M8Q2 105 aa5.14□□□□□ -1.59
Bdnf-202ENSMUST00000111042 H2al1eQ810S6 105 aa5.14□□□□□ -1.59
Bdnf-202ENSMUST00000111042 SptssbQ925E8 76 aa5.14□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Cdc42se1Q8BHL7 80 aa5.13□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Chtf8P0CG14 533 aa5.1□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Gm37013Q8K491 104 aa5.1□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Cypt14J3QPF7 87 aa5.1□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Bean1Q9EQG5 255 aa5.09□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Krtap10-4Q08EG8 221 aa5.08□□□□□ -1.6
Bdnf-202ENSMUST00000111042 Krtap29-1A2A5X4 342 aa5.07□□□□□ -1.6
Bdnf-202ENSMUST00000111042 Cypt15B1AXS0 87 aa5.06□□□□□ -1.6
Bdnf-202ENSMUST00000111042 RetnlbQ99P86 105 aa5.06□□□□□ -1.6
Bdnf-202ENSMUST00000111042 Ndufb1P0DN34 57 aa5.04□□□□□ -1.6
Bdnf-202ENSMUST00000111042 Gm10999F6Q4M4 69 aa5.04□□□□□ -1.6
Bdnf-202ENSMUST00000111042 Gm20661K7N787 53 aa5.02□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Sec61gP60060 68 aa5.02□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Phxr4P15974 95 aa5.02□□□□□ -1.61
Bdnf-202ENSMUST00000111042 OxtP35454 125 aa5.02□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Krtap13O88375 197 aa5.01□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Tenm2Q9WTS5 2764 aa5.01□□□□□ -1.61
Bdnf-202ENSMUST00000111042 A0A1Y7VJ07 166 aa5.01□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Gm16253D3Z167 63 aa5□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Ndufs5Q99LY9 106 aa4.99□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Krtap14O08640 167 aa4.99□□□□□ -1.61
Bdnf-202ENSMUST00000111042 H2al1kJ3QP08 105 aa4.99□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Q8BGJ3 129 aa4.99□□□□□ -1.61
Bdnf-202ENSMUST00000111042 H2al1mQ9DAD9 105 aa4.99□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Muc6Q80T03 2850 aa4.98□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Gm19402J3QJV4 266 aa4.97□□□□□ -1.61
Bdnf-202ENSMUST00000111042 Gm7544A0A1Y7VJ58 118 aa4.96□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Gm2310J3QNJ2 377 aa4.96□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Krtap10-10A0A1W2P7T6 217 aa4.96□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Defb1P56386 69 aa4.96□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Dnah14A0A140LIJ4 4489 aa4.95□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Tnp2P11378 117 aa4.92□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Hspg2Q05793 3707 aaKnown RBP4.92□□□□□ -1.62
Bdnf-202ENSMUST00000111042 A030014E15RikA0A1Y7VJV2 120 aa4.91□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Gm21798J3QNU5 87 aa4.91□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Megf8P60882 2789 aa4.91□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Limd2Q8BGB5 128 aa4.9□□□□□ -1.62
Bdnf-202ENSMUST00000111042 Gm2696A0A1W2P709 240 aa4.89□□□□□ -1.63
Bdnf-202ENSMUST00000111042 4930507D05RikQ8C9C9 103 aa4.89□□□□□ -1.63
Bdnf-202ENSMUST00000111042 2310034C09RikQ9D746 214 aa4.88□□□□□ -1.63
Bdnf-202ENSMUST00000111042 Dnah10D3YYQ8 4591 aa4.87□□□□□ -1.63
Bdnf-202ENSMUST00000111042 Gm26620Q9CY65 116 aa4.87□□□□□ -1.63
Bdnf-202ENSMUST00000111042 Gm10643Q3URG9 111 aa4.85□□□□□ -1.63
Bdnf-202ENSMUST00000111042 Uqcr11Q9CPX8 56 aa4.84□□□□□ -1.63
Bdnf-202ENSMUST00000111042 Gm9918Q8BUR5 174 aa4.83□□□□□ -1.64
Bdnf-202ENSMUST00000111042 Gm21887J3QQ04 176 aa4.78□□□□□ -1.64
Bdnf-202ENSMUST00000111042 Gm4491E0CX42 125 aa4.77□□□□□ -1.65
Bdnf-202ENSMUST00000111042 Dnah17Q69Z23 4481 aa4.77□□□□□ -1.65
Bdnf-202ENSMUST00000111042 Dnah7bL7N1Y0 4068 aa4.75□□□□□ -1.65
Bdnf-202ENSMUST00000111042 Huwe1Q7TMY8 4377 aaKnown RBP4.75□□□□□ -1.65
Bdnf-202ENSMUST00000111042 4933415A04RikQ9D443 101 aa4.73□□□□□ -1.65
Bdnf-202ENSMUST00000111042 Gm17606F6ZL36 78 aa4.71□□□□□ -1.65
Bdnf-202ENSMUST00000111042 Rnase13Q5GAM7 153 aa4.67□□□□□ -1.66
Bdnf-202ENSMUST00000111042 Kmt2aP55200 3966 aa4.67□□□□□ -1.66
Bdnf-202ENSMUST00000111042 Gm3646F6S692 53 aa4.67□□□□□ -1.66
Bdnf-202ENSMUST00000111042 Csmd3Q80T79 3707 aa4.67□□□□□ -1.66
Bdnf-202ENSMUST00000111042 Dnah3Q8BW94 4083 aa4.66□□□□□ -1.66
Bdnf-202ENSMUST00000111042 PlecQ9QXS1 4691 aaKnown RBP4.65□□□□□ -1.66
Bdnf-202ENSMUST00000111042 Krtap15-1Q9QZU5 150 aa4.65□□□□□ -1.67
Bdnf-202ENSMUST00000111042 Dnah11E9Q7N9 4488 aa4.64□□□□□ -1.67
Bdnf-202ENSMUST00000111042 Gm5767A0A0J9YTU8 78 aa4.63□□□□□ -1.67
Bdnf-202ENSMUST00000111042 Dnah6E9Q0B6 4144 aa4.63□□□□□ -1.67
Bdnf-202ENSMUST00000111042 Rps29P62274 56 aa4.62□□□□□ -1.67
Bdnf-202ENSMUST00000111042 TnxbO35452 4006 aa4.61□□□□□ -1.67
Bdnf-202ENSMUST00000111042 Dnah9B1AR51 4484 aa4.6□□□□□ -1.67
Bdnf-202ENSMUST00000111042 D6Ertd527eA0A0N4SWI3 464 aa4.58□□□□□ -1.68
Bdnf-202ENSMUST00000111042 Gm9821Q8K076 103 aa4.56□□□□□ -1.68
Bdnf-202ENSMUST00000111042 Gm3880A0A1B0GSB3 72 aa4.55□□□□□ -1.68
Bdnf-202ENSMUST00000111042 PrkdcP97313 4128 aa4.53□□□□□ -1.68
Bdnf-202ENSMUST00000111042 Gm12216A0A1W2P827 62 aa4.53□□□□□ -1.68
Bdnf-202ENSMUST00000111042 2310079G19RikQ9D6L6 185 aa4.52□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Gm5965D3Z724 196 aa4.51□□□□□ -1.69
Bdnf-202ENSMUST00000111042 1700042G07RikB1AUF7 90 aa4.51□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Cox6b2Q80ZN9 88 aa4.51□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Dnah5Q8VHE6 4621 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Dnah1E9Q8T7 4250 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 A030003K21RikA0A1Y7VIM3 128 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Lce1dQ9D731 133 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Vps13dB1ART2 4390 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Gm9955Q8CEJ8 102 aa4.5□□□□□ -1.69
Bdnf-202ENSMUST00000111042 A930033H14RikG5E8X6 103 aa4.49□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Sec61bQ9CQS8 96 aaKnown RBP4.48□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Gm9736A0A1W2P7N1 277 aa4.47□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Dync2h1Q45VK7 4306 aa4.47□□□□□ -1.69
Bdnf-202ENSMUST00000111042 Gm38119A0A0A6YX29 146 aa4.45□□□□□ -1.7
Bdnf-202ENSMUST00000111042 Rpl37Q9D823 97 aa4.44□□□□□ -1.7
Bdnf-202ENSMUST00000111042 Gm10382Q3V0T5 144 aa4.42□□□□□ -1.7
Bdnf-202ENSMUST00000111042 Lrp1bQ9JI18 4599 aa4.4□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Lce1a1Q9CQH5 143 aa4.4□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Lce1gQ9D195 139 aa4.4□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Krtap19-5O08632 62 aa4.39□□□□□ -1.71
Bdnf-202ENSMUST00000111042 CriptO70333 101 aa4.38□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Stard9Q80TF6 4561 aa4.38□□□□□ -1.71
Bdnf-202ENSMUST00000111042 ApobE9Q414 4505 aa4.37□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Dnah2P0C6F1 4456 aa4.36□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Dnah7cA0A087WR13 4024 aa4.34□□□□□ -1.71
Bdnf-202ENSMUST00000111042 Gm20537G3UYK7 97 aa4.33□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms