RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Pde6gP09174 87 aa13.13□□□□□ -0.31
Ccdc50-202ENSMUST00000096127 Krtap15-1Q9QZU5 150 aa13.12□□□□□ -0.31
Ccdc50-202ENSMUST00000096127 Trav14d-3-dv8A0A075B619 120 aa13.11□□□□□ -0.31
Ccdc50-202ENSMUST00000096127 Gm44790A0A0N4SV91 103 aa13.11□□□□□ -0.31
Ccdc50-202ENSMUST00000096127 Tmem213Q08EA8 116 aa13.11□□□□□ -0.31
Ccdc50-202ENSMUST00000096127 Krtap1-3A2A588 173 aa13.06□□□□□ -0.32
Ccdc50-202ENSMUST00000096127 C130032M10RikQ8C888 123 aa13.06□□□□□ -0.32
Ccdc50-202ENSMUST00000096127 A0A286YCQ8 80 aa13.05□□□□□ -0.32
Ccdc50-202ENSMUST00000096127 Gm37013Q8K491 104 aa13.05□□□□□ -0.32
Ccdc50-202ENSMUST00000096127 UqcrqQ9CQ69 82 aa13.05□□□□□ -0.32
Ccdc50-202ENSMUST00000096127 2310057N15RikQ9D6T8 200 aa13.02□□□□□ -0.33
Ccdc50-202ENSMUST00000096127 Mrpl34Q99N91 92 aa13□□□□□ -0.33
Ccdc50-202ENSMUST00000096127 Gm26602M0QWA4 95 aa12.97□□□□□ -0.33
Ccdc50-202ENSMUST00000096127 Rpl37Q9D823 97 aa12.97□□□□□ -0.33
Ccdc50-202ENSMUST00000096127 Defa21Q8C1P2 93 aa12.94□□□□□ -0.34
Ccdc50-202ENSMUST00000096127 Igkv3-3A0A140T8Q0 119 aa12.9□□□□□ -0.34
Ccdc50-202ENSMUST00000096127 Xcl1P47993 114 aa12.84□□□□□ -0.35
Ccdc50-202ENSMUST00000096127 Gm26920S4R2A5 56 aa12.84□□□□□ -0.35
Ccdc50-202ENSMUST00000096127 Reg3aO09037 175 aa12.83□□□□□ -0.36
Ccdc50-202ENSMUST00000096127 Ormdl1Q921I0 153 aa12.83□□□□□ -0.36
Ccdc50-202ENSMUST00000096127 2310034C09RikQ9D746 214 aa12.8□□□□□ -0.36
Ccdc50-202ENSMUST00000096127 ZanO88799 5376 aa12.77□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Crct1Q6PAI5 102 aa12.76□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 BikO70337 150 aa12.75□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Mtatp8P03930 67 aa12.75□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Igkv8-19A0A0G2JFN8 121 aa12.72□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Gm11562A0PK51 136 aa12.71□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Scgb1b2O35176 93 aa12.71□□□□□ -0.37
Ccdc50-202ENSMUST00000096127 Lyrm7Q9DA03 104 aa12.67□□□□□ -0.38
Ccdc50-202ENSMUST00000096127 7530416G11RikJ3QJX6 159 aa12.66□□□□□ -0.38
Ccdc50-202ENSMUST00000096127 Defb13Q8R2I4 64 aa12.65□□□□□ -0.38
Ccdc50-202ENSMUST00000096127 LorP18165 486 aa12.64□□□□□ -0.39
Ccdc50-202ENSMUST00000096127 Fat4Q2PZL6 4981 aa12.62□□□□□ -0.39
Ccdc50-202ENSMUST00000096127 Gm10267M0QWD8 85 aa12.58□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Rnase13Q5GAM7 153 aa12.57□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Krtap16-3Q8C1I6 86 aa12.57□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Ubl5Q9EPV8 73 aa12.57□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 MplkipQ9D011 178 aa12.56□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Krtap19-1Q925H2 87 aa12.54□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Krtap19-3Q925H6 87 aa12.53□□□□□ -0.4
Ccdc50-202ENSMUST00000096127 Apoc4Q61268 124 aa12.52□□□□□ -0.41
Ccdc50-202ENSMUST00000096127 Gm19402J3QJV4 266 aa12.51□□□□□ -0.41
Ccdc50-202ENSMUST00000096127 Krtap3-2Q9D638 99 aa12.46□□□□□ -0.41
Ccdc50-202ENSMUST00000096127 Krtap3-3Q9D7P0 99 aa12.46□□□□□ -0.41
Ccdc50-202ENSMUST00000096127 1700042G07RikB1AUF7 90 aa12.45□□□□□ -0.42
Ccdc50-202ENSMUST00000096127 Fam229aB2KGE5 128 aa12.41□□□□□ -0.42
Ccdc50-202ENSMUST00000096127 Trav3-1Q5R1I8 114 aa12.39□□□□□ -0.43
Ccdc50-202ENSMUST00000096127 Rnf213E9Q555 5152 aaKnown RBP12.36□□□□□ -0.43
Ccdc50-202ENSMUST00000096127 Krtap1-4Q3V2D6 188 aa12.35□□□□□ -0.43
Ccdc50-202ENSMUST00000096127 Pcp4l1Q6W8Q3 68 aa12.35□□□□□ -0.43
Ccdc50-202ENSMUST00000096127 Gm17416Q30KP4 66 aa12.32□□□□□ -0.44
Ccdc50-202ENSMUST00000096127 Gm10061D3Z714 54 aa12.31□□□□□ -0.44
Ccdc50-202ENSMUST00000096127 Gm28539A0A087WSL9 92 aa12.29□□□□□ -0.44
Ccdc50-202ENSMUST00000096127 Krtap4-2B1AQ85 167 aa12.28□□□□□ -0.44
Ccdc50-202ENSMUST00000096127 Gm10318A0A1W2P728 225 aa12.27□□□□□ -0.45
Ccdc50-202ENSMUST00000096127 Prr15lQ8JZM2 100 aa12.25□□□□□ -0.45
Ccdc50-202ENSMUST00000096127 Tmem254aP0DN89 123 aa12.22□□□□□ -0.45
Ccdc50-202ENSMUST00000096127 Tmem254bP0DN90 123 aa12.22□□□□□ -0.45
Ccdc50-202ENSMUST00000096127 Tmem254cP0DN91 123 aa12.22□□□□□ -0.45
Ccdc50-202ENSMUST00000096127 Gm4491E0CX42 125 aa12.2□□□□□ -0.46
Ccdc50-202ENSMUST00000096127 A0A286YE49 62 aa12.19□□□□□ -0.46
Ccdc50-202ENSMUST00000096127 Gm11569B1AQB1 180 aa12.13□□□□□ -0.47
Ccdc50-202ENSMUST00000096127 Chtf8P0CG14 533 aa12.13□□□□□ -0.47
Ccdc50-202ENSMUST00000096127 Samd13D3YUG0 102 aa12.09□□□□□ -0.47
Ccdc50-202ENSMUST00000096127 Gtf2h5Q8K2X8 71 aa12.09□□□□□ -0.47
Ccdc50-202ENSMUST00000096127 Naa38Q9D2U5 125 aa12.09□□□□□ -0.47
Ccdc50-202ENSMUST00000096127 Spink8Q09TK9 105 aa12□□□□□ -0.49
Ccdc50-202ENSMUST00000096127 9230102O04RikA2ASX7 82 aa11.99□□□□□ -0.49
Ccdc50-202ENSMUST00000096127 Hist1h4aP62806 103 aaKnown RBP11.98□□□□□ -0.49
Ccdc50-202ENSMUST00000096127 Pxt1Q8K459 51 aa11.98□□□□□ -0.49
Ccdc50-202ENSMUST00000096127 Lce1gQ9D195 139 aa11.98□□□□□ -0.49
Ccdc50-202ENSMUST00000096127 Krtap13-1Q8K198 168 aa11.93□□□□□ -0.5
Ccdc50-202ENSMUST00000096127 1700074P13RikQ9D9G7 251 aa11.9□□□□□ -0.5
Ccdc50-202ENSMUST00000096127 SspoQ8CG65 4998 aa11.9□□□□□ -0.5
Ccdc50-202ENSMUST00000096127 Q8BGJ3 129 aa11.86□□□□□ -0.51
Ccdc50-202ENSMUST00000096127 Syne2Q6ZWQ0 6874 aaKnown RBP11.86□□□□□ -0.51
Ccdc50-202ENSMUST00000096127 Fam229bQ8CF36 80 aa11.85□□□□□ -0.51
Ccdc50-202ENSMUST00000096127 2210017I01RikA0A0A6YVV1 95 aa11.84□□□□□ -0.51
Ccdc50-202ENSMUST00000096127 Gm10999F6Q4M4 69 aa11.81□□□□□ -0.52
Ccdc50-202ENSMUST00000096127 Krtap1-5A2A590 122 aa11.8□□□□□ -0.52
Ccdc50-202ENSMUST00000096127 Ndufc1Q9CQY9 76 aa11.68□□□□□ -0.54
Ccdc50-202ENSMUST00000096127 4930507D05RikQ8C9C9 103 aa11.65□□□□□ -0.54
Ccdc50-202ENSMUST00000096127 2310079G19RikQ9D6L6 185 aa11.58□□□□□ -0.56
Ccdc50-202ENSMUST00000096127 Defb38Q7TNV7 63 aa11.56□□□□□ -0.56
Ccdc50-202ENSMUST00000096127 Fam240bJ3QMB3 78 aa11.54□□□□□ -0.56
Ccdc50-202ENSMUST00000096127 Gm11596B1AQB0 205 aa11.5□□□□□ -0.57
Ccdc50-202ENSMUST00000096127 Gm11555B1AQ89 175 aa11.48□□□□□ -0.57
Ccdc50-202ENSMUST00000096127 Gm21798J3QNU5 87 aa11.48□□□□□ -0.57
Ccdc50-202ENSMUST00000096127 B930094E09RikQ8C4T2 136 aa11.43□□□□□ -0.58
Ccdc50-202ENSMUST00000096127 Spint4Q9D263 159 aa11.42□□□□□ -0.58
Ccdc50-202ENSMUST00000096127 Atox1O08997 68 aaKnown RBP11.39□□□□□ -0.59
Ccdc50-202ENSMUST00000096127 Krtap3-1A2A591 98 aa11.34□□□□□ -0.59
Ccdc50-202ENSMUST00000096127 Gm10160F6Y577 67 aa11.34□□□□□ -0.59
Ccdc50-202ENSMUST00000096127 BatfO35284 125 aa11.34□□□□□ -0.59
Ccdc50-202ENSMUST00000096127 Gm45213A0A0U1RNZ6 101 aa11.32□□□□□ -0.6
Ccdc50-202ENSMUST00000096127 Bud31Q6PGH1 103 aa11.31□□□□□ -0.6
Ccdc50-202ENSMUST00000096127 Gm19426M0QWC7 77 aa11.3□□□□□ -0.6
Ccdc50-202ENSMUST00000096127 Atp5eP56382 52 aa11.3□□□□□ -0.6
Ccdc50-202ENSMUST00000096127 Krtap19-2Q925I0 141 aa11.28□□□□□ -0.6
Ccdc50-202ENSMUST00000096127 Muc5bE9Q5I3 4800 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms