RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 2310061N02RikQ9D6S9 174 aa8.06□□□□□ -1.12
Casc4-202ENSMUST00000089912 Dnah14A0A140LIJ4 4489 aa8.04□□□□□ -1.12
Casc4-202ENSMUST00000089912 Gm2310J3QNJ2 377 aa8.02□□□□□ -1.13
Casc4-202ENSMUST00000089912 Krtap13O88375 197 aa8.02□□□□□ -1.13
Casc4-202ENSMUST00000089912 1700042G07RikB1AUF7 90 aa8.01□□□□□ -1.13
Casc4-202ENSMUST00000089912 Gm17349F7BGH6 99 aa8.01□□□□□ -1.13
Casc4-202ENSMUST00000089912 Gm26620Q9CY65 116 aa8□□□□□ -1.13
Casc4-202ENSMUST00000089912 Ly6g6cQ9Z1Q4 126 aa8□□□□□ -1.13
Casc4-202ENSMUST00000089912 Ccdc179J3QM76 67 aa7.98□□□□□ -1.13
Casc4-202ENSMUST00000089912 Q8K1L6 76 aa7.96□□□□□ -1.13
Casc4-202ENSMUST00000089912 Gpr15lA0A0B4J1N3 78 aa7.96□□□□□ -1.14
Casc4-202ENSMUST00000089912 Q8BGJ3 129 aa7.96□□□□□ -1.14
Casc4-202ENSMUST00000089912 Znf706Q9D115 76 aaKnown RBP7.91□□□□□ -1.14
Casc4-202ENSMUST00000089912 Cypt15B1AXS0 87 aa7.9□□□□□ -1.14
Casc4-202ENSMUST00000089912 OxtP35454 125 aa7.89□□□□□ -1.15
Casc4-202ENSMUST00000089912 Krtap10-10A0A1W2P7T6 217 aa7.87□□□□□ -1.15
Casc4-202ENSMUST00000089912 Gm10643Q3URG9 111 aa7.86□□□□□ -1.15
Casc4-202ENSMUST00000089912 Gm9821Q8K076 103 aa7.85□□□□□ -1.15
Casc4-202ENSMUST00000089912 Limd2Q8BGB5 128 aa7.84□□□□□ -1.15
Casc4-202ENSMUST00000089912 Cypt14J3QPF7 87 aa7.82□□□□□ -1.16
Casc4-202ENSMUST00000089912 2310034C09RikQ9D746 214 aa7.82□□□□□ -1.16
Casc4-202ENSMUST00000089912 Uqcr11Q9CPX8 56 aa7.81□□□□□ -1.16
Casc4-202ENSMUST00000089912 Dnah11E9Q7N9 4488 aa7.8□□□□□ -1.16
Casc4-202ENSMUST00000089912 NbdyA0A0N4SUI7 68 aa7.79□□□□□ -1.16
Casc4-202ENSMUST00000089912 Gm16253D3Z167 63 aa7.79□□□□□ -1.16
Casc4-202ENSMUST00000089912 Gm10065F6TJM2 114 aa7.79□□□□□ -1.16
Casc4-202ENSMUST00000089912 Krtap14O08640 167 aa7.78□□□□□ -1.16
Casc4-202ENSMUST00000089912 2310050C09RikG5E8Z3 280 aa7.77□□□□□ -1.17
Casc4-202ENSMUST00000089912 RetnlbQ99P86 105 aa7.74□□□□□ -1.17
Casc4-202ENSMUST00000089912 Krtap29-1A2A5X4 342 aa7.72□□□□□ -1.17
Casc4-202ENSMUST00000089912 AW011738F6S7Q2 159 aa7.7□□□□□ -1.18
Casc4-202ENSMUST00000089912 Dnah5Q8VHE6 4621 aa7.69□□□□□ -1.18
Casc4-202ENSMUST00000089912 Dnah9B1AR51 4484 aa7.69□□□□□ -1.18
Casc4-202ENSMUST00000089912 Kmt2aP55200 3966 aa7.69□□□□□ -1.18
Casc4-202ENSMUST00000089912 Gm2696A0A1W2P709 240 aa7.69□□□□□ -1.18
Casc4-202ENSMUST00000089912 Dnah3Q8BW94 4083 aa7.63□□□□□ -1.19
Casc4-202ENSMUST00000089912 CriptO70333 101 aa7.63□□□□□ -1.19
Casc4-202ENSMUST00000089912 Huwe1Q7TMY8 4377 aaKnown RBP7.61□□□□□ -1.19
Casc4-202ENSMUST00000089912 Gm3880A0A1B0GSB3 72 aa7.6□□□□□ -1.19
Casc4-202ENSMUST00000089912 Dnah17Q69Z23 4481 aa7.59□□□□□ -1.19
Casc4-202ENSMUST00000089912 Dnah6E9Q0B6 4144 aa7.58□□□□□ -1.2
Casc4-202ENSMUST00000089912 4930507D05RikQ8C9C9 103 aa7.55□□□□□ -1.2
Casc4-202ENSMUST00000089912 Gm12216A0A1W2P827 62 aa7.53□□□□□ -1.2
Casc4-202ENSMUST00000089912 Tnp2P11378 117 aa7.53□□□□□ -1.2
Casc4-202ENSMUST00000089912 Gm9918Q8BUR5 174 aa7.53□□□□□ -1.2
Casc4-202ENSMUST00000089912 Fras1Q80T14 4010 aa7.52□□□□□ -1.21
Casc4-202ENSMUST00000089912 Gm4491E0CX42 125 aa7.51□□□□□ -1.21
Casc4-202ENSMUST00000089912 PrkdcP97313 4128 aa7.47□□□□□ -1.21
Casc4-202ENSMUST00000089912 Dnah7cA0A087WR13 4024 aa7.45□□□□□ -1.22
Casc4-202ENSMUST00000089912 Dnah1E9Q8T7 4250 aa7.45□□□□□ -1.22
Casc4-202ENSMUST00000089912 Defb11Q8R2I7 77 aa7.45□□□□□ -1.22
Casc4-202ENSMUST00000089912 PlecQ9QXS1 4691 aaKnown RBP7.42□□□□□ -1.22
Casc4-202ENSMUST00000089912 Stard9Q80TF6 4561 aa7.38□□□□□ -1.23
Casc4-202ENSMUST00000089912 2310079G19RikQ9D6L6 185 aa7.37□□□□□ -1.23
Casc4-202ENSMUST00000089912 D6Ertd527eA0A0N4SWI3 464 aa7.36□□□□□ -1.23
Casc4-202ENSMUST00000089912 Hectd4E9Q2E4 4418 aa7.32□□□□□ -1.24
Casc4-202ENSMUST00000089912 Lrp1bQ9JI18 4599 aa7.29□□□□□ -1.24
Casc4-202ENSMUST00000089912 Dnah7aE9Q0T8 4024 aa7.29□□□□□ -1.24
Casc4-202ENSMUST00000089912 Gm20537G3UYK7 97 aa7.27□□□□□ -1.25
Casc4-202ENSMUST00000089912 Rnase13Q5GAM7 153 aa7.24□□□□□ -1.25
Casc4-202ENSMUST00000089912 Gm17606F6ZL36 78 aa7.23□□□□□ -1.25
Casc4-202ENSMUST00000089912 Pla2g10Q9QXX3 151 aa7.21□□□□□ -1.25
Casc4-202ENSMUST00000089912 Mp68P56379 58 aa7.21□□□□□ -1.26
Casc4-202ENSMUST00000089912 Gm10382Q3V0T5 144 aa7.19□□□□□ -1.26
Casc4-202ENSMUST00000089912 Krtap15-1Q9QZU5 150 aa7.18□□□□□ -1.26
Casc4-202ENSMUST00000089912 Vps13bQ80TY5 3993 aa7.16□□□□□ -1.26
Casc4-202ENSMUST00000089912 Krtap3-2Q9D638 99 aa7.16□□□□□ -1.26
Casc4-202ENSMUST00000089912 Krtap3-3Q9D7P0 99 aa7.16□□□□□ -1.26
Casc4-202ENSMUST00000089912 Cox6b2Q80ZN9 88 aa7.14□□□□□ -1.27
Casc4-202ENSMUST00000089912 Gm9736A0A1W2P7N1 277 aa7.11□□□□□ -1.27
Casc4-202ENSMUST00000089912 A930033H14RikG5E8X6 103 aa7.1□□□□□ -1.27
Casc4-202ENSMUST00000089912 Romo1P60603 79 aa7.09□□□□□ -1.27
Casc4-202ENSMUST00000089912 TnxbO35452 4006 aa7.07□□□□□ -1.28
Casc4-202ENSMUST00000089912 Vps13dB1ART2 4390 aa7.07□□□□□ -1.28
Casc4-202ENSMUST00000089912 Dnah2P0C6F1 4456 aa7.05□□□□□ -1.28
Casc4-202ENSMUST00000089912 ApobE9Q414 4505 aa7.05□□□□□ -1.28
Casc4-202ENSMUST00000089912 Gm9955Q8CEJ8 102 aa7.05□□□□□ -1.28
Casc4-202ENSMUST00000089912 Lrp1Q91ZX7 4545 aaKnown RBP7.04□□□□□ -1.28
Casc4-202ENSMUST00000089912 Gm20538F6Z9R1 75 aa7.04□□□□□ -1.28
Casc4-202ENSMUST00000089912 Gm11939A2A592 99 aa7.03□□□□□ -1.28
Casc4-202ENSMUST00000089912 Gm5965D3Z724 196 aa7.02□□□□□ -1.29
Casc4-202ENSMUST00000089912 Dync2h1Q45VK7 4306 aa6.99□□□□□ -1.29
Casc4-202ENSMUST00000089912 Gm5767A0A0J9YTU8 78 aa6.99□□□□□ -1.29
Casc4-202ENSMUST00000089912 Pkd1O08852 4293 aa6.98□□□□□ -1.29
Casc4-202ENSMUST00000089912 Rpl37Q9D823 97 aa6.95□□□□□ -1.3
Casc4-202ENSMUST00000089912 Ryr3A2AGL3 4863 aa6.92□□□□□ -1.3
Casc4-202ENSMUST00000089912 Dync1h1Q9JHU4 4644 aaKnown RBP6.88□□□□□ -1.31
Casc4-202ENSMUST00000089912 Fat3Q8BNA6 4555 aa6.88□□□□□ -1.31
Casc4-202ENSMUST00000089912 Gm21887J3QQ04 176 aa6.85□□□□□ -1.31
Casc4-202ENSMUST00000089912 Fat2Q5F226 4351 aa6.83□□□□□ -1.32
Casc4-202ENSMUST00000089912 Fat1A0A1L1SQU7 4645 aa6.79□□□□□ -1.32
Casc4-202ENSMUST00000089912 Rps29P62274 56 aa6.78□□□□□ -1.32
Casc4-202ENSMUST00000089912 SacsQ9JLC8 4582 aa6.77□□□□□ -1.33
Casc4-202ENSMUST00000089912 Ndufaf8A2AMZ4 74 aa6.75□□□□□ -1.33
Casc4-202ENSMUST00000089912 2310057N15RikQ9D6T8 200 aa6.75□□□□□ -1.33
Casc4-202ENSMUST00000089912 Pkhd1E9PZ36 4059 aa6.74□□□□□ -1.33
Casc4-202ENSMUST00000089912 Mycbp2Q7TPH6 4711 aa6.71□□□□□ -1.33
Casc4-202ENSMUST00000089912 Gm19426M0QWC7 77 aa6.69□□□□□ -1.34
Casc4-202ENSMUST00000089912 Pkhd1l1Q80ZA4 4249 aa6.68□□□□□ -1.34
Casc4-202ENSMUST00000089912 Gm10318A0A1W2P728 225 aa6.68□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms