RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Gm16253D3Z167 63 aa9.49□□□□□ -0.89
Trim50-201ENSMUST00000065785 Dync1h1Q9JHU4 4644 aaKnown RBP9.49□□□□□ -0.89
Trim50-201ENSMUST00000065785 Coa6Q8BGD8 79 aa9.48□□□□□ -0.89
Trim50-201ENSMUST00000065785 Gm2696A0A1W2P709 240 aa9.47□□□□□ -0.89
Trim50-201ENSMUST00000065785 Ryr1E9PZQ0 5035 aa9.47□□□□□ -0.89
Trim50-201ENSMUST00000065785 Anapc11Q9CPX9 84 aa9.46□□□□□ -0.9
Trim50-201ENSMUST00000065785 ApobE9Q414 4505 aa9.46□□□□□ -0.9
Trim50-201ENSMUST00000065785 Fat1A0A1L1SQU7 4645 aa9.46□□□□□ -0.9
Trim50-201ENSMUST00000065785 Spint4Q9D263 159 aa9.45□□□□□ -0.9
Trim50-201ENSMUST00000065785 Pet100P0DJE0 76 aa9.42□□□□□ -0.9
Trim50-201ENSMUST00000065785 Atox1O08997 68 aaKnown RBP9.42□□□□□ -0.9
Trim50-201ENSMUST00000065785 Hectd4E9Q2E4 4418 aa9.41□□□□□ -0.9
Trim50-201ENSMUST00000065785 Krtap13O88375 197 aa9.41□□□□□ -0.9
Trim50-201ENSMUST00000065785 SnurfQ9WU12 71 aa9.41□□□□□ -0.9
Trim50-201ENSMUST00000065785 Pkhd1E9PZ36 4059 aa9.41□□□□□ -0.9
Trim50-201ENSMUST00000065785 Serp1Q9Z1W5 66 aa9.4□□□□□ -0.91
Trim50-201ENSMUST00000065785 Igkv3-3A0A140T8Q0 119 aa9.39□□□□□ -0.91
Trim50-201ENSMUST00000065785 1700074P13RikQ9D9G7 251 aa9.39□□□□□ -0.91
Trim50-201ENSMUST00000065785 SacsQ9JLC8 4582 aa9.37□□□□□ -0.91
Trim50-201ENSMUST00000065785 Brk1Q91VR8 75 aa9.31□□□□□ -0.92
Trim50-201ENSMUST00000065785 SvipQ3UZP4 77 aa9.29□□□□□ -0.92
Trim50-201ENSMUST00000065785 Lrp1bQ9JI18 4599 aa9.28□□□□□ -0.92
Trim50-201ENSMUST00000065785 Coa5Q99M07 74 aa9.26□□□□□ -0.93
Trim50-201ENSMUST00000065785 Defb12Q8K4N3 78 aa9.25□□□□□ -0.93
Trim50-201ENSMUST00000065785 Cdc42se1Q8BHL7 80 aa9.24□□□□□ -0.93
Trim50-201ENSMUST00000065785 Cypt15B1AXS0 87 aa9.22□□□□□ -0.93
Trim50-201ENSMUST00000065785 Gm10267M0QWD8 85 aa9.22□□□□□ -0.93
Trim50-201ENSMUST00000065785 H2al1aQ5M8Q2 105 aa9.22□□□□□ -0.93
Trim50-201ENSMUST00000065785 Spaca4Q80ZQ0 127 aa9.22□□□□□ -0.93
Trim50-201ENSMUST00000065785 Chtf8P0CG14 533 aa9.21□□□□□ -0.94
Trim50-201ENSMUST00000065785 Mrpl55Q9CZ83 127 aa9.18□□□□□ -0.94
Trim50-201ENSMUST00000065785 Dph3Q8K0W9 82 aa9.17□□□□□ -0.94
Trim50-201ENSMUST00000065785 Kmt2cQ8BRH4 4903 aa9.17□□□□□ -0.94
Trim50-201ENSMUST00000065785 A530084C06RikQ3UTW2 186 aa9.15□□□□□ -0.94
Trim50-201ENSMUST00000065785 Gm10160F6Y577 67 aa9.14□□□□□ -0.95
Trim50-201ENSMUST00000065785 Vps13bQ80TY5 3993 aa9.13□□□□□ -0.95
Trim50-201ENSMUST00000065785 Defb13Q8R2I4 64 aa9.12□□□□□ -0.95
Trim50-201ENSMUST00000065785 Dnah8Q91XQ0 4731 aa9.11□□□□□ -0.95
Trim50-201ENSMUST00000065785 Gm10197F6QEY5 67 aa9.1□□□□□ -0.95
Trim50-201ENSMUST00000065785 Fat2Q5F226 4351 aa9.08□□□□□ -0.96
Trim50-201ENSMUST00000065785 Pkhd1l1Q80ZA4 4249 aa9.06□□□□□ -0.96
Trim50-201ENSMUST00000065785 Rps29P62274 56 aa9.05□□□□□ -0.96
Trim50-201ENSMUST00000065785 Gm10643Q3URG9 111 aa9.04□□□□□ -0.96
Trim50-201ENSMUST00000065785 Herc2Q4U2R1 4836 aa8.99□□□□□ -0.97
Trim50-201ENSMUST00000065785 Phxr4P15974 95 aa8.98□□□□□ -0.97
Trim50-201ENSMUST00000065785 Defb38Q7TNV7 63 aa8.97□□□□□ -0.97
Trim50-201ENSMUST00000065785 RetnlbQ99P86 105 aa8.96□□□□□ -0.98
Trim50-201ENSMUST00000065785 Birc6O88738 4882 aa8.93□□□□□ -0.98
Trim50-201ENSMUST00000065785 Gm21798J3QNU5 87 aa8.92□□□□□ -0.98
Trim50-201ENSMUST00000065785 Gm10337F7DEP7 55 aa8.91□□□□□ -0.98
Trim50-201ENSMUST00000065785 Abca13Q5SSE9 5034 aa8.91□□□□□ -0.98
Trim50-201ENSMUST00000065785 Krtap19-5O08632 62 aa8.9□□□□□ -0.98
Trim50-201ENSMUST00000065785 Gm26620Q9CY65 116 aa8.89□□□□□ -0.99
Trim50-201ENSMUST00000065785 Lrp1Q91ZX7 4545 aaKnown RBP8.89□□□□□ -0.99
Trim50-201ENSMUST00000065785 Kiaa1109A2AAE1 5005 aa8.88□□□□□ -0.99
Trim50-201ENSMUST00000065785 Fat3Q8BNA6 4555 aa8.88□□□□□ -0.99
Trim50-201ENSMUST00000065785 Krtap3-2Q9D638 99 aa8.87□□□□□ -0.99
Trim50-201ENSMUST00000065785 Krtap3-3Q9D7P0 99 aa8.87□□□□□ -0.99
Trim50-201ENSMUST00000065785 H2al1bA0A087WP11 105 aa8.85□□□□□ -0.99
Trim50-201ENSMUST00000065785 H2al1kJ3QP08 105 aa8.85□□□□□ -0.99
Trim50-201ENSMUST00000065785 H2al1eQ810S6 105 aa8.85□□□□□ -0.99
Trim50-201ENSMUST00000065785 H2al1mQ9DAD9 105 aa8.85□□□□□ -0.99
Trim50-201ENSMUST00000065785 Gm20661K7N787 53 aa8.84□□□□□ -0.99
Trim50-201ENSMUST00000065785 Gm11939A2A592 99 aa8.82□□□□□ -1
Trim50-201ENSMUST00000065785 Dnhd1D3Z2X2 4750 aa8.82□□□□□ -1
Trim50-201ENSMUST00000065785 Gm10999F6Q4M4 69 aa8.8□□□□□ -1
Trim50-201ENSMUST00000065785 A930033H14RikG5E8X6 103 aa8.78□□□□□ -1
Trim50-201ENSMUST00000065785 Sox16Q62247 57 aa8.78□□□□□ -1
Trim50-201ENSMUST00000065785 Q8BGJ3 129 aa8.77□□□□□ -1.01
Trim50-201ENSMUST00000065785 2310034C09RikQ9D746 214 aa8.75□□□□□ -1.01
Trim50-201ENSMUST00000065785 2310079G19RikQ9D6L6 185 aa8.74□□□□□ -1.01
Trim50-201ENSMUST00000065785 HydinQ80W93 5154 aa8.72□□□□□ -1.01
Trim50-201ENSMUST00000065785 Ndufb1P0DN34 57 aa8.71□□□□□ -1.01
Trim50-201ENSMUST00000065785 Limd2Q8BGB5 128 aa8.68□□□□□ -1.02
Trim50-201ENSMUST00000065785 Uqcr11Q9CPX8 56 aa8.68□□□□□ -1.02
Trim50-201ENSMUST00000065785 4933415A04RikQ9D443 101 aa8.68□□□□□ -1.02
Trim50-201ENSMUST00000065785 4930507D05RikQ8C9C9 103 aa8.67□□□□□ -1.02
Trim50-201ENSMUST00000065785 Gm4491E0CX42 125 aa8.66□□□□□ -1.02
Trim50-201ENSMUST00000065785 PcloQ9QYX7 5068 aa8.65□□□□□ -1.02
Trim50-201ENSMUST00000065785 Mycbp2Q7TPH6 4711 aa8.62□□□□□ -1.03
Trim50-201ENSMUST00000065785 Gm5767A0A0J9YTU8 78 aa8.62□□□□□ -1.03
Trim50-201ENSMUST00000065785 D6Ertd527eA0A0N4SWI3 464 aa8.6□□□□□ -1.03
Trim50-201ENSMUST00000065785 Lce1mQ9CR91 182 aa8.59□□□□□ -1.03
Trim50-201ENSMUST00000065785 SptssbQ925E8 76 aa8.57□□□□□ -1.04
Trim50-201ENSMUST00000065785 Defb1P56386 69 aa8.47□□□□□ -1.05
Trim50-201ENSMUST00000065785 9230102O04RikA2ASX7 82 aa8.47□□□□□ -1.05
Trim50-201ENSMUST00000065785 Gm9736A0A1W2P7N1 277 aa8.46□□□□□ -1.06
Trim50-201ENSMUST00000065785 Lrp2A2ARV4 4660 aa8.46□□□□□ -1.06
Trim50-201ENSMUST00000065785 Herc1E9PZP8 4859 aa8.41□□□□□ -1.06
Trim50-201ENSMUST00000065785 Rpl37Q9D823 97 aa8.4□□□□□ -1.07
Trim50-201ENSMUST00000065785 Gm5965D3Z724 196 aa8.39□□□□□ -1.07
Trim50-201ENSMUST00000065785 Rnase13Q5GAM7 153 aa8.33□□□□□ -1.08
Trim50-201ENSMUST00000065785 Cox6b2Q80ZN9 88 aa8.33□□□□□ -1.08
Trim50-201ENSMUST00000065785 Krtap15-1Q9QZU5 150 aa8.31□□□□□ -1.08
Trim50-201ENSMUST00000065785 Gm3646F6S692 53 aa8.29□□□□□ -1.08
Trim50-201ENSMUST00000065785 Gm18596A0A1W2P860 280 aa8.26□□□□□ -1.09
Trim50-201ENSMUST00000065785 Gm17416Q30KP4 66 aa8.24□□□□□ -1.09
Trim50-201ENSMUST00000065785 Gm9821Q8K076 103 aa8.22□□□□□ -1.09
Trim50-201ENSMUST00000065785 Sec61gP60060 68 aa8.22□□□□□ -1.09
Trim50-201ENSMUST00000065785 Krtap17-1A2A5X6 109 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms