RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Gm19426M0QWC7 77 aa10,46□□□□□ -0,73
Scaf11-201ENSMUST00000047835 Gm2310J3QNJ2 377 aa10,45□□□□□ -0,74
Scaf11-201ENSMUST00000047835 BC029722A0A0N4SW31 51 aa10,42□□□□□ -0,74
Scaf11-201ENSMUST00000047835 Celsr2Q9R0M0 2920 aa10,42□□□□□ -0,74
Scaf11-201ENSMUST00000047835 Gm3646F6S692 53 aa10,39□□□□□ -0,75
Scaf11-201ENSMUST00000047835 RelnQ60841 3461 aa10,39□□□□□ -0,75
Scaf11-201ENSMUST00000047835 Trank1Q8BV79 2999 aa10,39□□□□□ -0,75
Scaf11-201ENSMUST00000047835 Rpl37Q9D823 97 aa10,35□□□□□ -0,75
Scaf11-201ENSMUST00000047835 Rps29P62274 56 aa10,35□□□□□ -0,75
Scaf11-201ENSMUST00000047835 Vps13cQ8BX70 3748 aa10,34□□□□□ -0,75
Scaf11-201ENSMUST00000047835 Chd9Q8BYH8 2885 aa10,33□□□□□ -0,76
Scaf11-201ENSMUST00000047835 TgO08710 2766 aa10,33□□□□□ -0,76
Scaf11-201ENSMUST00000047835 Srrm2Q8BTI8 2703 aaKnown RBP10,33□□□□□ -0,76
Scaf11-201ENSMUST00000047835 Tenm3Q9WTS6 2715 aa10,32□□□□□ -0,76
Scaf11-201ENSMUST00000047835 ApcQ61315 2845 aa10,27□□□□□ -0,76
Scaf11-201ENSMUST00000047835 SpegQ62407 3262 aa10,26□□□□□ -0,77
Scaf11-201ENSMUST00000047835 Akap9Q70FJ1 3797 aa10,23□□□□□ -0,77
Scaf11-201ENSMUST00000047835 Romo1P60603 79 aa10,22□□□□□ -0,77
Scaf11-201ENSMUST00000047835 DmdP11531 3678 aa10,22□□□□□ -0,77
Scaf11-201ENSMUST00000047835 Pdzd2E9Q1M1 2796 aa10,2□□□□□ -0,78
Scaf11-201ENSMUST00000047835 Nf1Q04690 2841 aa10,18□□□□□ -0,78
Scaf11-201ENSMUST00000047835 Gm5965D3Z724 196 aa10,18□□□□□ -0,78
Scaf11-201ENSMUST00000047835 Gm10382Q3V0T5 144 aa10,14□□□□□ -0,79
Scaf11-201ENSMUST00000047835 LrbaQ9ESE1 2856 aa10,14□□□□□ -0,79
Scaf11-201ENSMUST00000047835 Cox6b2Q80ZN9 88 aa10,11□□□□□ -0,79
Scaf11-201ENSMUST00000047835 4933415A04RikQ9D443 101 aa10,11□□□□□ -0,79
Scaf11-201ENSMUST00000047835 2310057N15RikQ9D6T8 200 aa10,09□□□□□ -0,79
Scaf11-201ENSMUST00000047835 Muc5acE9QAQ8 3455 aa10,06□□□□□ -0,8
Scaf11-201ENSMUST00000047835 D6Ertd527eA0A0N4SWI3 464 aa10,05□□□□□ -0,8
Scaf11-201ENSMUST00000047835 SmcpP15265 143 aa9,93□□□□□ -0,82
Scaf11-201ENSMUST00000047835 1700042G07RikB1AUF7 90 aa9,85□□□□□ -0,83
Scaf11-201ENSMUST00000047835 Helz2E9QAM5 2947 aaKnown RBP9,82□□□□□ -0,84
Scaf11-201ENSMUST00000047835 Lama5Q61001 3718 aa9,8□□□□□ -0,84
Scaf11-201ENSMUST00000047835 Tenm2Q9WTS5 2764 aa9,79□□□□□ -0,84
Scaf11-201ENSMUST00000047835 Smg1Q8BKX6 3658 aaKnown RBP9,76□□□□□ -0,85
Scaf11-201ENSMUST00000047835 Csmd1Q923L3 3564 aa9,75□□□□□ -0,85
Scaf11-201ENSMUST00000047835 Tenm1Q9WTS4 2731 aa9,75□□□□□ -0,85
Scaf11-201ENSMUST00000047835 Gm21887J3QQ04 176 aa9,71□□□□□ -0,86
Scaf11-201ENSMUST00000047835 Gm9736A0A1W2P7N1 277 aa9,71□□□□□ -0,86
Scaf11-201ENSMUST00000047835 OtogO55225 2910 aa9,71□□□□□ -0,86
Scaf11-201ENSMUST00000047835 A930033H14RikG5E8X6 103 aa9,7□□□□□ -0,86
Scaf11-201ENSMUST00000047835 Zfhx4Q9JJN2 3550 aa9,68□□□□□ -0,86
Scaf11-201ENSMUST00000047835 SpenQ62504 3644 aaKnown RBP9,54□□□□□ -0,88
Scaf11-201ENSMUST00000047835 Gm884A2A9H6 3643 aa9,49□□□□□ -0,89
Scaf11-201ENSMUST00000047835 Fbn1Q61554 2873 aaKnown RBP9,47□□□□□ -0,89
Scaf11-201ENSMUST00000047835 Gm20537G3UYK7 97 aa9,4□□□□□ -0,9
Scaf11-201ENSMUST00000047835 VwfQ8CIZ8 2813 aa9,38□□□□□ -0,91
Scaf11-201ENSMUST00000047835 2310079G19RikQ9D6L6 185 aa9,35□□□□□ -0,91
Scaf11-201ENSMUST00000047835 Gm9918Q8BUR5 174 aa9,34□□□□□ -0,91
Scaf11-201ENSMUST00000047835 Svep1A2AVA0 3567 aa9,3□□□□□ -0,92
Scaf11-201ENSMUST00000047835 Tnp1P10856 55 aa9,27□□□□□ -0,92
Scaf11-201ENSMUST00000047835 Ank2Q8C8R3 3898 aa9,27□□□□□ -0,93
Scaf11-201ENSMUST00000047835 B930094E09RikQ8C4T2 136 aa9,26□□□□□ -0,93
Scaf11-201ENSMUST00000047835 Gm17416Q30KP4 66 aa9,24□□□□□ -0,93
Scaf11-201ENSMUST00000047835 Gm10318A0A1W2P728 225 aa9,23□□□□□ -0,93
Scaf11-201ENSMUST00000047835 Ndufaf8A2AMZ4 74 aa9,2□□□□□ -0,94
Scaf11-201ENSMUST00000047835 Cmya5Q70KF4 3739 aa9,19□□□□□ -0,94
Scaf11-201ENSMUST00000047835 Col7a1Q63870 2944 aa9,17□□□□□ -0,94
Scaf11-201ENSMUST00000047835 Krtap19-5O08632 62 aa9,17□□□□□ -0,94
Scaf11-201ENSMUST00000047835 2210017I01RikA0A0A6YVV1 95 aa9,1□□□□□ -0,95
Scaf11-201ENSMUST00000047835 Gm40193A0A1B0GT39 78 aa9,05□□□□□ -0,96
Scaf11-201ENSMUST00000047835 Megf8P60882 2789 aa9,04□□□□□ -0,96
Scaf11-201ENSMUST00000047835 Crct1Q6PAI5 102 aa9,04□□□□□ -0,96
Scaf11-201ENSMUST00000047835 Csmd2V9GX34 3611 aa9,02□□□□□ -0,97
Scaf11-201ENSMUST00000047835 Gm11939A2A592 99 aa9,01□□□□□ -0,97
Scaf11-201ENSMUST00000047835 Muc4Q8JZM8 3443 aa8,92□□□□□ -0,98
Scaf11-201ENSMUST00000047835 Muc6Q80T03 2850 aa8,87□□□□□ -0,99
Scaf11-201ENSMUST00000047835 Prm2P07978 107 aa8,86□□□□□ -0,99
Scaf11-201ENSMUST00000047835 Krtap13-1Q8K198 168 aa8,81□□□□□ -1
Scaf11-201ENSMUST00000047835 Dnah14A0A140LIJ4 4489 aa8,79□□□□□ -1
Scaf11-201ENSMUST00000047835 Gm17402F6Z0L5 76 aa8,75□□□□□ -1,01
Scaf11-201ENSMUST00000047835 Huwe1Q7TMY8 4377 aaKnown RBP8,71□□□□□ -1,01
Scaf11-201ENSMUST00000047835 Gm9112A2AI92 75 aa8,7□□□□□ -1,02
Scaf11-201ENSMUST00000047835 LystP97412 3788 aa8,65□□□□□ -1,02
Scaf11-201ENSMUST00000047835 Gm19668J3QMD1 248 aa8,63□□□□□ -1,03
Scaf11-201ENSMUST00000047835 Krtap3-2Q9D638 99 aa8,61□□□□□ -1,03
Scaf11-201ENSMUST00000047835 Krtap3-3Q9D7P0 99 aa8,61□□□□□ -1,03
Scaf11-201ENSMUST00000047835 Krtap3-1A2A591 98 aa8,54□□□□□ -1,04
Scaf11-201ENSMUST00000047835 Dnah10D3YYQ8 4591 aa8,46□□□□□ -1,06
Scaf11-201ENSMUST00000047835 Dnah5Q8VHE6 4621 aa8,36□□□□□ -1,07
Scaf11-201ENSMUST00000047835 CubnQ9JLB4 3623 aa8,34□□□□□ -1,07
Scaf11-201ENSMUST00000047835 Gm18596A0A1W2P860 280 aa8,29□□□□□ -1,08
Scaf11-201ENSMUST00000047835 BsnO88737 3942 aa8,27□□□□□ -1,09
Scaf11-201ENSMUST00000047835 Vps13dB1ART2 4390 aa8,21□□□□□ -1,1
Scaf11-201ENSMUST00000047835 PlecQ9QXS1 4691 aaKnown RBP8,21□□□□□ -1,1
Scaf11-201ENSMUST00000047835 Dnah17Q69Z23 4481 aa8,18□□□□□ -1,1
Scaf11-201ENSMUST00000047835 Xirp2Q4U4S6 3784 aa8,18□□□□□ -1,1
Scaf11-201ENSMUST00000047835 Stard9Q80TF6 4561 aa8,17□□□□□ -1,1
Scaf11-201ENSMUST00000047835 Hspg2Q05793 3707 aaKnown RBP8,15□□□□□ -1,1
Scaf11-201ENSMUST00000047835 Csmd3Q80T79 3707 aa8,13□□□□□ -1,11
Scaf11-201ENSMUST00000047835 LorP18165 486 aa8,11□□□□□ -1,11
Scaf11-201ENSMUST00000047835 4933428G20RikQ9D3X4 101 aa8,09□□□□□ -1,11
Scaf11-201ENSMUST00000047835 Krtap1-5A2A590 122 aa8,07□□□□□ -1,12
Scaf11-201ENSMUST00000047835 Dnah11E9Q7N9 4488 aa8□□□□□ -1,13
Scaf11-201ENSMUST00000047835 Gm6358A0A087WPH4 74 aa7,95□□□□□ -1,14
Scaf11-201ENSMUST00000047835 Krtap19-9aF8WH65 55 aa7,94□□□□□ -1,14
Scaf11-201ENSMUST00000047835 Dync2h1Q45VK7 4306 aa7,9□□□□□ -1,14
Scaf11-201ENSMUST00000047835 TnxbO35452 4006 aa7,89□□□□□ -1,15
Scaf11-201ENSMUST00000047835 Krtap1-4Q3V2D6 188 aa7,88□□□□□ -1,15
Scaf11-201ENSMUST00000047835 Sprr2a3Q4KL71 83 aa7,85□□□□□ -1,15
Retrieved 100 of 22,080 RNA–protein pairs in 38,8 ms