RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Wfdc13Q5DQQ6 81 aa13,97□□□□□ -0,17
Upf3a-201ENSMUST00000043767 Lrp1bQ9JI18 4599 aa13,95□□□□□ -0,18
Upf3a-201ENSMUST00000043767 Gm27235Q3UW50 83 aa13,95□□□□□ -0,18
Upf3a-201ENSMUST00000043767 Spint4Q9D263 159 aa13,92□□□□□ -0,18
Upf3a-201ENSMUST00000043767 Q8K1L6 76 aa13,92□□□□□ -0,18
Upf3a-201ENSMUST00000043767 SacsQ9JLC8 4582 aa13,91□□□□□ -0,18
Upf3a-201ENSMUST00000043767 Hectd4E9Q2E4 4418 aa13,91□□□□□ -0,18
Upf3a-201ENSMUST00000043767 Cdc42se1Q8BHL7 80 aa13,91□□□□□ -0,18
Upf3a-201ENSMUST00000043767 1700018G05RikA0A1B0GSI2 66 aa13,87□□□□□ -0,19
Upf3a-201ENSMUST00000043767 Igkv3-7A0A0G2JE31 119 aa13,86□□□□□ -0,19
Upf3a-201ENSMUST00000043767 Igkv3-10A0A0G2JGN0 119 aa13,85□□□□□ -0,19
Upf3a-201ENSMUST00000043767 Gm21886J3QJU9 214 aa13,84□□□□□ -0,19
Upf3a-201ENSMUST00000043767 Chchd10Q7TNL9 138 aa13,83□□□□□ -0,2
Upf3a-201ENSMUST00000043767 Atox1O08997 68 aaKnown RBP13,81□□□□□ -0,2
Upf3a-201ENSMUST00000043767 Ryr1E9PZQ0 5035 aa13,8□□□□□ -0,2
Upf3a-201ENSMUST00000043767 Igkv3-5A0A140T8M6 119 aa13,8□□□□□ -0,2
Upf3a-201ENSMUST00000043767 Odf3bQ5M8M2 238 aa13,79□□□□□ -0,2
Upf3a-201ENSMUST00000043767 Defb39Q70KL3 74 aa13,76□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Coa5Q99M07 74 aa13,75□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Anapc11Q9CPX9 84 aa13,75□□□□□ -0,21
Upf3a-201ENSMUST00000043767 A0A286YE49 62 aa13,75□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Gm10197F6QEY5 67 aa13,73□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Gm20604F8WIA3 75 aa13,73□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Fat2Q5F226 4351 aa13,72□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Gm28230A0A0A0MQ91 144 aa13,71□□□□□ -0,21
Upf3a-201ENSMUST00000043767 Ccdc179J3QM76 67 aa13,7□□□□□ -0,22
Upf3a-201ENSMUST00000043767 Kmt2cQ8BRH4 4903 aa13,7□□□□□ -0,22
Upf3a-201ENSMUST00000043767 Reg3aO09037 175 aa13,7□□□□□ -0,22
Upf3a-201ENSMUST00000043767 Defb12Q8K4N3 78 aa13,65□□□□□ -0,22
Upf3a-201ENSMUST00000043767 Vps13bQ80TY5 3993 aa13,64□□□□□ -0,23
Upf3a-201ENSMUST00000043767 Bean1Q9EQG5 255 aa13,63□□□□□ -0,23
Upf3a-201ENSMUST00000043767 Znf706Q9D115 76 aaKnown RBP13,63□□□□□ -0,23
Upf3a-201ENSMUST00000043767 Rpl37aP61514 92 aa13,62□□□□□ -0,23
Upf3a-201ENSMUST00000043767 RetnlbQ99P86 105 aa13,62□□□□□ -0,23
Upf3a-201ENSMUST00000043767 1700074P13RikQ9D9G7 251 aa13,6□□□□□ -0,23
Upf3a-201ENSMUST00000043767 Gm2310J3QNJ2 377 aa13,59□□□□□ -0,23
Upf3a-201ENSMUST00000043767 Cypt14J3QPF7 87 aa13,55□□□□□ -0,24
Upf3a-201ENSMUST00000043767 Pkhd1l1Q80ZA4 4249 aa13,55□□□□□ -0,24
Upf3a-201ENSMUST00000043767 Sox16Q62247 57 aa13,52□□□□□ -0,25
Upf3a-201ENSMUST00000043767 Dnah8Q91XQ0 4731 aa13,49□□□□□ -0,25
Upf3a-201ENSMUST00000043767 Phxr4P15974 95 aa13,48□□□□□ -0,25
Upf3a-201ENSMUST00000043767 Lrp1Q91ZX7 4545 aaKnown RBP13,45□□□□□ -0,26
Upf3a-201ENSMUST00000043767 Chtf8P0CG14 533 aa13,43□□□□□ -0,26
Upf3a-201ENSMUST00000043767 4933415A04RikQ9D443 101 aa13,41□□□□□ -0,26
Upf3a-201ENSMUST00000043767 Krtap19-5O08632 62 aa13,38□□□□□ -0,27
Upf3a-201ENSMUST00000043767 Fat3Q8BNA6 4555 aa13,36□□□□□ -0,27
Upf3a-201ENSMUST00000043767 Abca13Q5SSE9 5034 aa13,33□□□□□ -0,28
Upf3a-201ENSMUST00000043767 Spaca4Q80ZQ0 127 aa13,31□□□□□ -0,28
Upf3a-201ENSMUST00000043767 Gm10267M0QWD8 85 aa13,3□□□□□ -0,28
Upf3a-201ENSMUST00000043767 Gm10160F6Y577 67 aa13,29□□□□□ -0,28
Upf3a-201ENSMUST00000043767 Gm16253D3Z167 63 aa13,28□□□□□ -0,28
Upf3a-201ENSMUST00000043767 Igkv3-3A0A140T8Q0 119 aa13,25□□□□□ -0,29
Upf3a-201ENSMUST00000043767 Herc2Q4U2R1 4836 aa13,23□□□□□ -0,29
Upf3a-201ENSMUST00000043767 Birc6O88738 4882 aa13,12□□□□□ -0,31
Upf3a-201ENSMUST00000043767 Kiaa1109A2AAE1 5005 aa13,12□□□□□ -0,31
Upf3a-201ENSMUST00000043767 Gm10643Q3URG9 111 aa13,09□□□□□ -0,31
Upf3a-201ENSMUST00000043767 Gm20661K7N787 53 aa13,08□□□□□ -0,32
Upf3a-201ENSMUST00000043767 Mycbp2Q7TPH6 4711 aa13,03□□□□□ -0,32
Upf3a-201ENSMUST00000043767 Ndufb1P0DN34 57 aa13,03□□□□□ -0,32
Upf3a-201ENSMUST00000043767 Dnhd1D3Z2X2 4750 aa12,99□□□□□ -0,33
Upf3a-201ENSMUST00000043767 Defb38Q7TNV7 63 aa12,98□□□□□ -0,33
Upf3a-201ENSMUST00000043767 Gm9736A0A1W2P7N1 277 aa12,97□□□□□ -0,33
Upf3a-201ENSMUST00000043767 HydinQ80W93 5154 aa12,95□□□□□ -0,34
Upf3a-201ENSMUST00000043767 SptssbQ925E8 76 aa12,95□□□□□ -0,34
Upf3a-201ENSMUST00000043767 Cypt15B1AXS0 87 aa12,93□□□□□ -0,34
Upf3a-201ENSMUST00000043767 D6Ertd527eA0A0N4SWI3 464 aa12,92□□□□□ -0,34
Upf3a-201ENSMUST00000043767 Limd2Q8BGB5 128 aa12,88□□□□□ -0,35
Upf3a-201ENSMUST00000043767 Gm21798J3QNU5 87 aa12,86□□□□□ -0,35
Upf3a-201ENSMUST00000043767 Rps29P62274 56 aa12,86□□□□□ -0,35
Upf3a-201ENSMUST00000043767 Uqcr11Q9CPX8 56 aa12,83□□□□□ -0,36
Upf3a-201ENSMUST00000043767 Gm3646F6S692 53 aa12,82□□□□□ -0,36
Upf3a-201ENSMUST00000043767 Defb13Q8R2I4 64 aa12,81□□□□□ -0,36
Upf3a-201ENSMUST00000043767 Sec61gP60060 68 aa12,79□□□□□ -0,36
Upf3a-201ENSMUST00000043767 Gm26620Q9CY65 116 aa12,76□□□□□ -0,37
Upf3a-201ENSMUST00000043767 PcloQ9QYX7 5068 aa12,74□□□□□ -0,37
Upf3a-201ENSMUST00000043767 1700042G07RikB1AUF7 90 aa12,73□□□□□ -0,37
Upf3a-201ENSMUST00000043767 Gm11939A2A592 99 aa12,68□□□□□ -0,38
Upf3a-201ENSMUST00000043767 Lrp2A2ARV4 4660 aa12,6□□□□□ -0,39
Upf3a-201ENSMUST00000043767 Gm5965D3Z724 196 aa12,6□□□□□ -0,39
Upf3a-201ENSMUST00000043767 9230102O04RikA2ASX7 82 aa12,58□□□□□ -0,39
Upf3a-201ENSMUST00000043767 Gm10999F6Q4M4 69 aa12,52□□□□□ -0,4
Upf3a-201ENSMUST00000043767 2310034C09RikQ9D746 214 aa12,46□□□□□ -0,41
Upf3a-201ENSMUST00000043767 Gm5767A0A0J9YTU8 78 aa12,45□□□□□ -0,42
Upf3a-201ENSMUST00000043767 2310079G19RikQ9D6L6 185 aa12,44□□□□□ -0,42
Upf3a-201ENSMUST00000043767 Q8BGJ3 129 aa12,42□□□□□ -0,42
Upf3a-201ENSMUST00000043767 Lce1mQ9CR91 182 aa12,4□□□□□ -0,42
Upf3a-201ENSMUST00000043767 Krtap3-2Q9D638 99 aa12,38□□□□□ -0,43
Upf3a-201ENSMUST00000043767 Krtap3-3Q9D7P0 99 aa12,38□□□□□ -0,43
Upf3a-201ENSMUST00000043767 Ndufs5Q99LY9 106 aa12,36□□□□□ -0,43
Upf3a-201ENSMUST00000043767 A930033H14RikG5E8X6 103 aa12,34□□□□□ -0,43
Upf3a-201ENSMUST00000043767 Herc1E9PZP8 4859 aa12,33□□□□□ -0,44
Upf3a-201ENSMUST00000043767 4930507D05RikQ8C9C9 103 aa12,27□□□□□ -0,45
Upf3a-201ENSMUST00000043767 Krtap15-1Q9QZU5 150 aa12,27□□□□□ -0,45
Upf3a-201ENSMUST00000043767 Defb1P56386 69 aa12,21□□□□□ -0,45
Upf3a-201ENSMUST00000043767 Gm9821Q8K076 103 aa12,12□□□□□ -0,47
Upf3a-201ENSMUST00000043767 Gm4491E0CX42 125 aa12,12□□□□□ -0,47
Upf3a-201ENSMUST00000043767 Rpl37Q9D823 97 aa12,12□□□□□ -0,47
Upf3a-201ENSMUST00000043767 Pla2g10Q9QXX3 151 aa12,1□□□□□ -0,47
Upf3a-201ENSMUST00000043767 Rnase13Q5GAM7 153 aa11,93□□□□□ -0,5
Upf3a-201ENSMUST00000043767 Gm18596A0A1W2P860 280 aa11,93□□□□□ -0,5
Retrieved 100 of 22,080 RNA–protein pairs in 57,3 ms