RNA–Protein interactions for RNA: ENSMUST00000041418.12

Stag1-201, Transcript of Cohesin subunit SA-1, mousemouse

TSL 5 BASIC

Gene Stag1, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-201ENSMUST00000041418 Romo1P60603 79 aa5.06□□□□□ -1.6
Stag1-201ENSMUST00000041418 TgO08710 2766 aa5.05□□□□□ -1.6
Stag1-201ENSMUST00000041418 D6Ertd527eA0A0N4SWI3 464 aa5.05□□□□□ -1.6
Stag1-201ENSMUST00000041418 Krtap10-10A0A1W2P7T6 217 aa5.05□□□□□ -1.6
Stag1-201ENSMUST00000041418 Cox6b2Q80ZN9 88 aa5.05□□□□□ -1.6
Stag1-201ENSMUST00000041418 Unc80Q8BLN6 3261 aa5.04□□□□□ -1.6
Stag1-201ENSMUST00000041418 LrbaQ9ESE1 2856 aa5.01□□□□□ -1.61
Stag1-201ENSMUST00000041418 ApcQ61315 2845 aa4.99□□□□□ -1.61
Stag1-201ENSMUST00000041418 Gm10382Q3V0T5 144 aa4.98□□□□□ -1.61
Stag1-201ENSMUST00000041418 Gm3646F6S692 53 aa4.96□□□□□ -1.62
Stag1-201ENSMUST00000041418 Gm2696A0A1W2P709 240 aa4.96□□□□□ -1.62
Stag1-201ENSMUST00000041418 A930033H14RikG5E8X6 103 aa4.94□□□□□ -1.62
Stag1-201ENSMUST00000041418 Helz2E9QAM5 2947 aaKnown RBP4.92□□□□□ -1.62
Stag1-201ENSMUST00000041418 Gm5965D3Z724 196 aa4.9□□□□□ -1.63
Stag1-201ENSMUST00000041418 Tenm1Q9WTS4 2731 aa4.89□□□□□ -1.63
Stag1-201ENSMUST00000041418 Dchs2A0A0A6YW72 3346 aa4.88□□□□□ -1.63
Stag1-201ENSMUST00000041418 Celsr3Q91ZI0 3301 aa4.87□□□□□ -1.63
Stag1-201ENSMUST00000041418 Col6a3E9PWQ3 3284 aa4.85□□□□□ -1.63
Stag1-201ENSMUST00000041418 Megf8P60882 2789 aa4.84□□□□□ -1.63
Stag1-201ENSMUST00000041418 Brca2P97929 3329 aa4.83□□□□□ -1.64
Stag1-201ENSMUST00000041418 Gm21887J3QQ04 176 aa4.83□□□□□ -1.64
Stag1-201ENSMUST00000041418 VcanQ62059 3357 aa4.83□□□□□ -1.64
Stag1-201ENSMUST00000041418 SpegQ62407 3262 aa4.83□□□□□ -1.64
Stag1-201ENSMUST00000041418 4933415A04RikQ9D443 101 aa4.82□□□□□ -1.64
Stag1-201ENSMUST00000041418 2310057N15RikQ9D6T8 200 aa4.78□□□□□ -1.64
Stag1-201ENSMUST00000041418 Tenm2Q9WTS5 2764 aa4.76□□□□□ -1.65
Stag1-201ENSMUST00000041418 Gm17416Q30KP4 66 aa4.75□□□□□ -1.65
Stag1-201ENSMUST00000041418 Tnp1P10856 55 aa4.74□□□□□ -1.65
Stag1-201ENSMUST00000041418 1700042G07RikB1AUF7 90 aa4.73□□□□□ -1.65
Stag1-201ENSMUST00000041418 Gm40193A0A1B0GT39 78 aa4.71□□□□□ -1.66
Stag1-201ENSMUST00000041418 SmcpP15265 143 aa4.71□□□□□ -1.66
Stag1-201ENSMUST00000041418 RelnQ60841 3461 aa4.68□□□□□ -1.66
Stag1-201ENSMUST00000041418 OtogO55225 2910 aa4.67□□□□□ -1.66
Stag1-201ENSMUST00000041418 Dchs1E9PVD3 3291 aa4.64□□□□□ -1.67
Stag1-201ENSMUST00000041418 2210017I01RikA0A0A6YVV1 95 aa4.61□□□□□ -1.67
Stag1-201ENSMUST00000041418 Gm17402F6Z0L5 76 aa4.56□□□□□ -1.68
Stag1-201ENSMUST00000041418 B930094E09RikQ8C4T2 136 aa4.56□□□□□ -1.68
Stag1-201ENSMUST00000041418 Fbn1Q61554 2873 aaKnown RBP4.53□□□□□ -1.68
Stag1-201ENSMUST00000041418 VwfQ8CIZ8 2813 aa4.52□□□□□ -1.69
Stag1-201ENSMUST00000041418 2310079G19RikQ9D6L6 185 aa4.51□□□□□ -1.69
Stag1-201ENSMUST00000041418 Muc6Q80T03 2850 aa4.49□□□□□ -1.69
Stag1-201ENSMUST00000041418 Gm20537G3UYK7 97 aa4.48□□□□□ -1.69
Stag1-201ENSMUST00000041418 Muc5acE9QAQ8 3455 aa4.48□□□□□ -1.69
Stag1-201ENSMUST00000041418 Wdfy3Q6VNB8 3508 aa4.47□□□□□ -1.69
Stag1-201ENSMUST00000041418 Gm9736A0A1W2P7N1 277 aa4.46□□□□□ -1.7
Stag1-201ENSMUST00000041418 Krtap19-5O08632 62 aa4.44□□□□□ -1.7
Stag1-201ENSMUST00000041418 Col7a1Q63870 2944 aa4.41□□□□□ -1.7
Stag1-201ENSMUST00000041418 Zfhx4Q9JJN2 3550 aa4.41□□□□□ -1.7
Stag1-201ENSMUST00000041418 DmdP11531 3678 aa4.41□□□□□ -1.7
Stag1-201ENSMUST00000041418 Akap9Q70FJ1 3797 aa4.4□□□□□ -1.71
Stag1-201ENSMUST00000041418 Ndufaf8A2AMZ4 74 aa4.38□□□□□ -1.71
Stag1-201ENSMUST00000041418 Gm11939A2A592 99 aa4.37□□□□□ -1.71
Stag1-201ENSMUST00000041418 Prm2P07978 107 aa4.34□□□□□ -1.71
Stag1-201ENSMUST00000041418 Myo15aQ9QZZ4 3511 aa4.34□□□□□ -1.71
Stag1-201ENSMUST00000041418 Gm9918Q8BUR5 174 aa4.31□□□□□ -1.72
Stag1-201ENSMUST00000041418 Gm19668J3QMD1 248 aa4.29□□□□□ -1.72
Stag1-201ENSMUST00000041418 Vps13cQ8BX70 3748 aa4.29□□□□□ -1.72
Stag1-201ENSMUST00000041418 Krtap13-1Q8K198 168 aa4.27□□□□□ -1.73
Stag1-201ENSMUST00000041418 Muc4Q8JZM8 3443 aa4.24□□□□□ -1.73
Stag1-201ENSMUST00000041418 Gm9112A2AI92 75 aa4.23□□□□□ -1.73
Stag1-201ENSMUST00000041418 Lama5Q61001 3718 aa4.2□□□□□ -1.74
Stag1-201ENSMUST00000041418 4933428G20RikQ9D3X4 101 aa4.19□□□□□ -1.74
Stag1-201ENSMUST00000041418 SpenQ62504 3644 aaKnown RBP4.19□□□□□ -1.74
Stag1-201ENSMUST00000041418 Smg1Q8BKX6 3658 aaKnown RBP4.18□□□□□ -1.74
Stag1-201ENSMUST00000041418 Zfhx3Q61329 3726 aa4.17□□□□□ -1.74
Stag1-201ENSMUST00000041418 Crct1Q6PAI5 102 aa4.13□□□□□ -1.75
Stag1-201ENSMUST00000041418 Krtap3-2Q9D638 99 aa4.13□□□□□ -1.75
Stag1-201ENSMUST00000041418 Krtap3-3Q9D7P0 99 aa4.13□□□□□ -1.75
Stag1-201ENSMUST00000041418 Krtap3-1A2A591 98 aa4.12□□□□□ -1.75
Stag1-201ENSMUST00000041418 Ank2Q8C8R3 3898 aa4.11□□□□□ -1.75
Stag1-201ENSMUST00000041418 Csmd1Q923L3 3564 aa4.09□□□□□ -1.75
Stag1-201ENSMUST00000041418 Gm10318A0A1W2P728 225 aa4.09□□□□□ -1.75
Stag1-201ENSMUST00000041418 Csmd2V9GX34 3611 aa4.02□□□□□ -1.77
Stag1-201ENSMUST00000041418 Gm18596A0A1W2P860 280 aa4□□□□□ -1.77
Stag1-201ENSMUST00000041418 Krtap1-5A2A590 122 aa3.98□□□□□ -1.77
Stag1-201ENSMUST00000041418 Ryr1E9PZQ0 5035 aa3.95□□□□□ -1.78
Stag1-201ENSMUST00000041418 Krtap8-1O08633 61 aa3.95□□□□□ -1.78
Stag1-201ENSMUST00000041418 Krtap19-9aF8WH65 55 aa3.94□□□□□ -1.78
Stag1-201ENSMUST00000041418 Gm884A2A9H6 3643 aa3.93□□□□□ -1.78
Stag1-201ENSMUST00000041418 Svep1A2AVA0 3567 aa3.89□□□□□ -1.79
Stag1-201ENSMUST00000041418 Sprr2kO70562 68 aa3.88□□□□□ -1.79
Stag1-201ENSMUST00000041418 Sprr2a3Q4KL71 83 aa3.87□□□□□ -1.79
Stag1-201ENSMUST00000041418 Sprr2a1Q9CQK8 83 aa3.87□□□□□ -1.79
Stag1-201ENSMUST00000041418 Krtap1-4Q3V2D6 188 aa3.86□□□□□ -1.79
Stag1-201ENSMUST00000041418 Stard9Q80TF6 4561 aa3.85□□□□□ -1.79
Stag1-201ENSMUST00000041418 LorP18165 486 aa3.84□□□□□ -1.79
Stag1-201ENSMUST00000041418 Gm6358A0A087WPH4 74 aa3.83□□□□□ -1.8
Stag1-201ENSMUST00000041418 Dnah14A0A140LIJ4 4489 aa3.83□□□□□ -1.8
Stag1-201ENSMUST00000041418 LystP97412 3788 aa3.82□□□□□ -1.8
Stag1-201ENSMUST00000041418 Huwe1Q7TMY8 4377 aaKnown RBP3.82□□□□□ -1.8
Stag1-201ENSMUST00000041418 Gm19402J3QJV4 266 aa3.82□□□□□ -1.8
Stag1-201ENSMUST00000041418 Vps13dB1ART2 4390 aa3.81□□□□□ -1.8
Stag1-201ENSMUST00000041418 PlecQ9QXS1 4691 aaKnown RBP3.8□□□□□ -1.8
Stag1-201ENSMUST00000041418 Krtap19-9bQ99NG9 58 aa3.8□□□□□ -1.8
Stag1-201ENSMUST00000041418 Cmya5Q70KF4 3739 aa3.8□□□□□ -1.8
Stag1-201ENSMUST00000041418 Krtap12-1Q9Z287 130 aa3.77□□□□□ -1.81
Stag1-201ENSMUST00000041418 Dnah5Q8VHE6 4621 aa3.76□□□□□ -1.81
Stag1-201ENSMUST00000041418 Lce1mQ9CR91 182 aa3.76□□□□□ -1.81
Stag1-201ENSMUST00000041418 Krtap7-1Q9D3I6 87 aa3.76□□□□□ -1.81
Stag1-201ENSMUST00000041418 Dnah17Q69Z23 4481 aa3.75□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms