RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Trank1Q8BV79 2999 aa9,62□□□□□ -0,87
Col27a1-201ENSMUST00000036300 Krtap14O08640 167 aa9,62□□□□□ -0,87
Col27a1-201ENSMUST00000036300 2310057N15RikQ9D6T8 200 aa9,52□□□□□ -0,88
Col27a1-201ENSMUST00000036300 Gm21887J3QQ04 176 aa9,52□□□□□ -0,89
Col27a1-201ENSMUST00000036300 FlncQ8VHX6 2726 aaKnown RBP9,52□□□□□ -0,89
Col27a1-201ENSMUST00000036300 Gm2696A0A1W2P709 240 aa9,52□□□□□ -0,89
Col27a1-201ENSMUST00000036300 NbeaQ9EPN1 2936 aa9,5□□□□□ -0,89
Col27a1-201ENSMUST00000036300 Gm2310J3QNJ2 377 aa9,5□□□□□ -0,89
Col27a1-201ENSMUST00000036300 VcanQ62059 3357 aa9,49□□□□□ -0,89
Col27a1-201ENSMUST00000036300 FcgbpE9Q0B5 2583 aa9,48□□□□□ -0,89
Col27a1-201ENSMUST00000036300 LrbaQ9ESE1 2856 aa9,47□□□□□ -0,89
Col27a1-201ENSMUST00000036300 Hivep1Q03172 2688 aa9,42□□□□□ -0,9
Col27a1-201ENSMUST00000036300 Cox6b2Q80ZN9 88 aa9,42□□□□□ -0,9
Col27a1-201ENSMUST00000036300 Wdfy3Q6VNB8 3508 aa9,39□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Rps29P62274 56 aa9,38□□□□□ -0,91
Col27a1-201ENSMUST00000036300 1700042G07RikB1AUF7 90 aa9,36□□□□□ -0,91
Col27a1-201ENSMUST00000036300 2310061N02RikQ9D6S9 174 aa9,36□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Tnp1P10856 55 aa9,36□□□□□ -0,91
Col27a1-201ENSMUST00000036300 4933415A04RikQ9D443 101 aa9,35□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Celsr2Q9R0M0 2920 aa9,34□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Tenm1Q9WTS4 2731 aa9,34□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Gm5965D3Z724 196 aa9,34□□□□□ -0,91
Col27a1-201ENSMUST00000036300 Ndufaf8A2AMZ4 74 aa9,32□□□□□ -0,92
Col27a1-201ENSMUST00000036300 Nf1Q04690 2841 aa9,26□□□□□ -0,93
Col27a1-201ENSMUST00000036300 Akap9Q70FJ1 3797 aa9,25□□□□□ -0,93
Col27a1-201ENSMUST00000036300 Pdzd2E9Q1M1 2796 aa9,25□□□□□ -0,93
Col27a1-201ENSMUST00000036300 TgO08710 2766 aa9,25□□□□□ -0,93
Col27a1-201ENSMUST00000036300 D6Ertd527eA0A0N4SWI3 464 aa9,2□□□□□ -0,94
Col27a1-201ENSMUST00000036300 Tenm4Q3UHK6 2771 aa9,17□□□□□ -0,94
Col27a1-201ENSMUST00000036300 DmdP11531 3678 aa9,11□□□□□ -0,95
Col27a1-201ENSMUST00000036300 Gm9112A2AI92 75 aa9,08□□□□□ -0,96
Col27a1-201ENSMUST00000036300 A930033H14RikG5E8X6 103 aa9,02□□□□□ -0,96
Col27a1-201ENSMUST00000036300 Vps13cQ8BX70 3748 aa9,02□□□□□ -0,97
Col27a1-201ENSMUST00000036300 Csmd1Q923L3 3564 aa8,98□□□□□ -0,97
Col27a1-201ENSMUST00000036300 RelnQ60841 3461 aa8,95□□□□□ -0,98
Col27a1-201ENSMUST00000036300 Gm9918Q8BUR5 174 aa8,95□□□□□ -0,98
Col27a1-201ENSMUST00000036300 Muc5acE9QAQ8 3455 aa8,92□□□□□ -0,98
Col27a1-201ENSMUST00000036300 OtogO55225 2910 aa8,91□□□□□ -0,98
Col27a1-201ENSMUST00000036300 Smg1Q8BKX6 3658 aaKnown RBP8,9□□□□□ -0,98
Col27a1-201ENSMUST00000036300 Gm40193A0A1B0GT39 78 aa8,86□□□□□ -0,99
Col27a1-201ENSMUST00000036300 VwfQ8CIZ8 2813 aa8,79□□□□□ -1
Col27a1-201ENSMUST00000036300 Tenm3Q9WTS6 2715 aa8,78□□□□□ -1
Col27a1-201ENSMUST00000036300 Zfhx4Q9JJN2 3550 aa8,76□□□□□ -1,01
Col27a1-201ENSMUST00000036300 B930094E09RikQ8C4T2 136 aa8,75□□□□□ -1,01
Col27a1-201ENSMUST00000036300 Gm20537G3UYK7 97 aa8,74□□□□□ -1,01
Col27a1-201ENSMUST00000036300 Prm2P07978 107 aa8,73□□□□□ -1,01
Col27a1-201ENSMUST00000036300 Tenm2Q9WTS5 2764 aa8,69□□□□□ -1,02
Col27a1-201ENSMUST00000036300 Cmya5Q70KF4 3739 aa8,69□□□□□ -1,02
Col27a1-201ENSMUST00000036300 Megf8P60882 2789 aa8,68□□□□□ -1,02
Col27a1-201ENSMUST00000036300 Helz2E9QAM5 2947 aaKnown RBP8,63□□□□□ -1,03
Col27a1-201ENSMUST00000036300 Gm9736A0A1W2P7N1 277 aa8,62□□□□□ -1,03
Col27a1-201ENSMUST00000036300 SmcpP15265 143 aa8,62□□□□□ -1,03
Col27a1-201ENSMUST00000036300 SpenQ62504 3644 aaKnown RBP8,61□□□□□ -1,03
Col27a1-201ENSMUST00000036300 Csmd2V9GX34 3611 aa8,51□□□□□ -1,05
Col27a1-201ENSMUST00000036300 4933428G20RikQ9D3X4 101 aa8,5□□□□□ -1,05
Col27a1-201ENSMUST00000036300 Gm10318A0A1W2P728 225 aa8,5□□□□□ -1,05
Col27a1-201ENSMUST00000036300 Lama5Q61001 3718 aa8,47□□□□□ -1,05
Col27a1-201ENSMUST00000036300 Col7a1Q63870 2944 aa8,47□□□□□ -1,05
Col27a1-201ENSMUST00000036300 Gm17416Q30KP4 66 aa8,25□□□□□ -1,09
Col27a1-201ENSMUST00000036300 Crct1Q6PAI5 102 aa8,25□□□□□ -1,09
Col27a1-201ENSMUST00000036300 2310079G19RikQ9D6L6 185 aa8,25□□□□□ -1,09
Col27a1-201ENSMUST00000036300 Gm884A2A9H6 3643 aa8,22□□□□□ -1,09
Col27a1-201ENSMUST00000036300 Gm19668J3QMD1 248 aa8,18□□□□□ -1,1
Col27a1-201ENSMUST00000036300 2210017I01RikA0A0A6YVV1 95 aa8,18□□□□□ -1,1
Col27a1-201ENSMUST00000036300 Fbn1Q61554 2873 aaKnown RBP8,15□□□□□ -1,1
Col27a1-201ENSMUST00000036300 Gm17402F6Z0L5 76 aa8,09□□□□□ -1,11
Col27a1-201ENSMUST00000036300 Muc4Q8JZM8 3443 aa8,01□□□□□ -1,13
Col27a1-201ENSMUST00000036300 Svep1A2AVA0 3567 aa7,98□□□□□ -1,13
Col27a1-201ENSMUST00000036300 Gm6358A0A087WPH4 74 aa7,97□□□□□ -1,13
Col27a1-201ENSMUST00000036300 LystP97412 3788 aa7,92□□□□□ -1,14
Col27a1-201ENSMUST00000036300 Ank2Q8C8R3 3898 aa7,91□□□□□ -1,14
Col27a1-201ENSMUST00000036300 CubnQ9JLB4 3623 aa7,9□□□□□ -1,14
Col27a1-201ENSMUST00000036300 Krtap13-1Q8K198 168 aa7,89□□□□□ -1,15
Col27a1-201ENSMUST00000036300 Krtap19-5O08632 62 aa7,83□□□□□ -1,16
Col27a1-201ENSMUST00000036300 Csmd3Q80T79 3707 aa7,79□□□□□ -1,16
Col27a1-201ENSMUST00000036300 Muc6Q80T03 2850 aa7,78□□□□□ -1,16
Col27a1-201ENSMUST00000036300 Sprr2kO70562 68 aa7,71□□□□□ -1,17
Col27a1-201ENSMUST00000036300 Gm11939A2A592 99 aa7,65□□□□□ -1,18
Col27a1-201ENSMUST00000036300 Hspg2Q05793 3707 aaKnown RBP7,61□□□□□ -1,19
Col27a1-201ENSMUST00000036300 Krtap8-1O08633 61 aa7,48□□□□□ -1,21
Col27a1-201ENSMUST00000036300 Krtap3-1A2A591 98 aa7,44□□□□□ -1,22
Col27a1-201ENSMUST00000036300 Xirp2Q4U4S6 3784 aa7,39□□□□□ -1,23
Col27a1-201ENSMUST00000036300 BsnO88737 3942 aa7,37□□□□□ -1,23
Col27a1-201ENSMUST00000036300 Krtap7-1Q9D3I6 87 aa7,35□□□□□ -1,23
Col27a1-201ENSMUST00000036300 Gm18596A0A1W2P860 280 aa7,35□□□□□ -1,23
Col27a1-201ENSMUST00000036300 Sprr2gO70558 76 aa7,29□□□□□ -1,24
Col27a1-201ENSMUST00000036300 Huwe1Q7TMY8 4377 aaKnown RBP7,27□□□□□ -1,25
Col27a1-201ENSMUST00000036300 Krtap19-9aF8WH65 55 aa7,23□□□□□ -1,25
Col27a1-201ENSMUST00000036300 LorP18165 486 aa7,19□□□□□ -1,26
Col27a1-201ENSMUST00000036300 Krtap3-2Q9D638 99 aa7,15□□□□□ -1,27
Col27a1-201ENSMUST00000036300 Krtap3-3Q9D7P0 99 aa7,15□□□□□ -1,27
Col27a1-201ENSMUST00000036300 Gm19402J3QJV4 266 aa7,13□□□□□ -1,27
Col27a1-201ENSMUST00000036300 Krtap19-9bQ99NG9 58 aa6,96□□□□□ -1,3
Col27a1-201ENSMUST00000036300 Krtap1-5A2A590 122 aa6,96□□□□□ -1,3
Col27a1-201ENSMUST00000036300 Sprr2a3Q4KL71 83 aa6,92□□□□□ -1,3
Col27a1-201ENSMUST00000036300 Sprr2a1Q9CQK8 83 aa6,92□□□□□ -1,3
Col27a1-201ENSMUST00000036300 Krtap1-4Q3V2D6 188 aa6,9□□□□□ -1,31
Col27a1-201ENSMUST00000036300 Dnah14A0A140LIJ4 4489 aa6,87□□□□□ -1,31
Col27a1-201ENSMUST00000036300 Krtap12-1Q9Z287 130 aa6,86□□□□□ -1,31
Col27a1-201ENSMUST00000036300 Vps13bQ80TY5 3993 aa6,78□□□□□ -1,32
Retrieved 100 of 22,080 RNA–protein pairs in 11,6 ms