RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Dchs1E9PVD3 3291 aa9.54□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 SmcpP15265 143 aa9.53□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 Romo1P60603 79 aa9.52□□□□□ -0.88
Ubfd1-201ENSMUST00000033158 Tenm4Q3UHK6 2771 aa9.51□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 Chd9Q8BYH8 2885 aa9.5□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 ApcQ61315 2845 aa9.5□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 Tnp2P11378 117 aa9.49□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 1700042G07RikB1AUF7 90 aa9.47□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 SpegQ62407 3262 aa9.46□□□□□ -0.89
Ubfd1-201ENSMUST00000033158 Rps29P62274 56 aa9.46□□□□□ -0.9
Ubfd1-201ENSMUST00000033158 Gm19426M0QWC7 77 aa9.45□□□□□ -0.9
Ubfd1-201ENSMUST00000033158 Gm10382Q3V0T5 144 aa9.43□□□□□ -0.9
Ubfd1-201ENSMUST00000033158 Trank1Q8BV79 2999 aa9.42□□□□□ -0.9
Ubfd1-201ENSMUST00000033158 Krtap10-10A0A1W2P7T6 217 aa9.42□□□□□ -0.9
Ubfd1-201ENSMUST00000033158 Pdzd2E9Q1M1 2796 aa9.36□□□□□ -0.91
Ubfd1-201ENSMUST00000033158 Cox6b2Q80ZN9 88 aa9.35□□□□□ -0.91
Ubfd1-201ENSMUST00000033158 Nf1Q04690 2841 aa9.35□□□□□ -0.91
Ubfd1-201ENSMUST00000033158 RelnQ60841 3461 aa9.29□□□□□ -0.92
Ubfd1-201ENSMUST00000033158 Tenm3Q9WTS6 2715 aa9.27□□□□□ -0.92
Ubfd1-201ENSMUST00000033158 LrbaQ9ESE1 2856 aa9.26□□□□□ -0.93
Ubfd1-201ENSMUST00000033158 Myo15aQ9QZZ4 3511 aa9.25□□□□□ -0.93
Ubfd1-201ENSMUST00000033158 D6Ertd527eA0A0N4SWI3 464 aa9.22□□□□□ -0.93
Ubfd1-201ENSMUST00000033158 Wdfy3Q6VNB8 3508 aa9.21□□□□□ -0.93
Ubfd1-201ENSMUST00000033158 Gm2696A0A1W2P709 240 aa9.2□□□□□ -0.94
Ubfd1-201ENSMUST00000033158 Helz2E9QAM5 2947 aaKnown RBP9.09□□□□□ -0.95
Ubfd1-201ENSMUST00000033158 Tenm1Q9WTS4 2731 aa9.05□□□□□ -0.96
Ubfd1-201ENSMUST00000033158 Muc5acE9QAQ8 3455 aa9.01□□□□□ -0.97
Ubfd1-201ENSMUST00000033158 DmdP11531 3678 aa8.99□□□□□ -0.97
Ubfd1-201ENSMUST00000033158 Akap9Q70FJ1 3797 aa8.98□□□□□ -0.97
Ubfd1-201ENSMUST00000033158 Gm5965D3Z724 196 aa8.98□□□□□ -0.97
Ubfd1-201ENSMUST00000033158 Gm21887J3QQ04 176 aa8.85□□□□□ -0.99
Ubfd1-201ENSMUST00000033158 OtogO55225 2910 aa8.83□□□□□ -1
Ubfd1-201ENSMUST00000033158 Tenm2Q9WTS5 2764 aa8.8□□□□□ -1
Ubfd1-201ENSMUST00000033158 2310057N15RikQ9D6T8 200 aa8.78□□□□□ -1
Ubfd1-201ENSMUST00000033158 Vps13cQ8BX70 3748 aa8.76□□□□□ -1.01
Ubfd1-201ENSMUST00000033158 Ndufaf8A2AMZ4 74 aa8.71□□□□□ -1.01
Ubfd1-201ENSMUST00000033158 Gm20537G3UYK7 97 aa8.69□□□□□ -1.02
Ubfd1-201ENSMUST00000033158 A930033H14RikG5E8X6 103 aa8.68□□□□□ -1.02
Ubfd1-201ENSMUST00000033158 Zfhx3Q61329 3726 aa8.67□□□□□ -1.02
Ubfd1-201ENSMUST00000033158 Zfhx4Q9JJN2 3550 aa8.64□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 Gm40193A0A1B0GT39 78 aa8.61□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 Megf8P60882 2789 aa8.61□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 2310079G19RikQ9D6L6 185 aa8.61□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 Tnp1P10856 55 aa8.6□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 Lama5Q61001 3718 aa8.6□□□□□ -1.03
Ubfd1-201ENSMUST00000033158 Col7a1Q63870 2944 aa8.56□□□□□ -1.04
Ubfd1-201ENSMUST00000033158 Smg1Q8BKX6 3658 aaKnown RBP8.55□□□□□ -1.04
Ubfd1-201ENSMUST00000033158 B930094E09RikQ8C4T2 136 aa8.52□□□□□ -1.05
Ubfd1-201ENSMUST00000033158 Gm17416Q30KP4 66 aa8.5□□□□□ -1.05
Ubfd1-201ENSMUST00000033158 VwfQ8CIZ8 2813 aa8.49□□□□□ -1.05
Ubfd1-201ENSMUST00000033158 SpenQ62504 3644 aaKnown RBP8.46□□□□□ -1.05
Ubfd1-201ENSMUST00000033158 Csmd1Q923L3 3564 aa8.41□□□□□ -1.06
Ubfd1-201ENSMUST00000033158 Fbn1Q61554 2873 aaKnown RBP8.41□□□□□ -1.06
Ubfd1-201ENSMUST00000033158 Gm9112A2AI92 75 aa8.37□□□□□ -1.07
Ubfd1-201ENSMUST00000033158 Gm9736A0A1W2P7N1 277 aa8.37□□□□□ -1.07
Ubfd1-201ENSMUST00000033158 2210017I01RikA0A0A6YVV1 95 aa8.34□□□□□ -1.07
Ubfd1-201ENSMUST00000033158 Muc6Q80T03 2850 aa8.19□□□□□ -1.1
Ubfd1-201ENSMUST00000033158 Muc4Q8JZM8 3443 aa8.18□□□□□ -1.1
Ubfd1-201ENSMUST00000033158 Gm17402F6Z0L5 76 aa8.17□□□□□ -1.1
Ubfd1-201ENSMUST00000033158 Svep1A2AVA0 3567 aa8.17□□□□□ -1.1
Ubfd1-201ENSMUST00000033158 Gm11939A2A592 99 aa8.14□□□□□ -1.11
Ubfd1-201ENSMUST00000033158 Gm884A2A9H6 3643 aa8.12□□□□□ -1.11
Ubfd1-201ENSMUST00000033158 Gm9918Q8BUR5 174 aa8.03□□□□□ -1.12
Ubfd1-201ENSMUST00000033158 Krtap19-5O08632 62 aa8□□□□□ -1.13
Ubfd1-201ENSMUST00000033158 Prm2P07978 107 aa7.94□□□□□ -1.14
Ubfd1-201ENSMUST00000033158 Csmd2V9GX34 3611 aa7.94□□□□□ -1.14
Ubfd1-201ENSMUST00000033158 Cmya5Q70KF4 3739 aa7.92□□□□□ -1.14
Ubfd1-201ENSMUST00000033158 Krtap13-1Q8K198 168 aa7.89□□□□□ -1.15
Ubfd1-201ENSMUST00000033158 Krtap3-2Q9D638 99 aa7.88□□□□□ -1.15
Ubfd1-201ENSMUST00000033158 Krtap3-3Q9D7P0 99 aa7.88□□□□□ -1.15
Ubfd1-201ENSMUST00000033158 Gm10318A0A1W2P728 225 aa7.86□□□□□ -1.15
Ubfd1-201ENSMUST00000033158 Gm19668J3QMD1 248 aa7.83□□□□□ -1.16
Ubfd1-201ENSMUST00000033158 Ank2Q8C8R3 3898 aa7.76□□□□□ -1.17
Ubfd1-201ENSMUST00000033158 Krtap3-1A2A591 98 aa7.75□□□□□ -1.17
Ubfd1-201ENSMUST00000033158 Crct1Q6PAI5 102 aa7.75□□□□□ -1.17
Ubfd1-201ENSMUST00000033158 LystP97412 3788 aa7.53□□□□□ -1.2
Ubfd1-201ENSMUST00000033158 CubnQ9JLB4 3623 aa7.53□□□□□ -1.2
Ubfd1-201ENSMUST00000033158 4933428G20RikQ9D3X4 101 aa7.52□□□□□ -1.21
Ubfd1-201ENSMUST00000033158 Dnah14A0A140LIJ4 4489 aa7.38□□□□□ -1.23
Ubfd1-201ENSMUST00000033158 Dnah5Q8VHE6 4621 aa7.25□□□□□ -1.25
Ubfd1-201ENSMUST00000033158 Krtap1-5A2A590 122 aa7.25□□□□□ -1.25
Ubfd1-201ENSMUST00000033158 Dnah10D3YYQ8 4591 aa7.24□□□□□ -1.25
Ubfd1-201ENSMUST00000033158 Sprr2a3Q4KL71 83 aa7.19□□□□□ -1.26
Ubfd1-201ENSMUST00000033158 Sprr2a1Q9CQK8 83 aa7.19□□□□□ -1.26
Ubfd1-201ENSMUST00000033158 Huwe1Q7TMY8 4377 aaKnown RBP7.19□□□□□ -1.26
Ubfd1-201ENSMUST00000033158 Stard9Q80TF6 4561 aa7.18□□□□□ -1.26
Ubfd1-201ENSMUST00000033158 Krtap19-9aF8WH65 55 aa7.09□□□□□ -1.27
Ubfd1-201ENSMUST00000033158 PlecQ9QXS1 4691 aaKnown RBP7.09□□□□□ -1.27
Ubfd1-201ENSMUST00000033158 Vps13dB1ART2 4390 aa7.08□□□□□ -1.28
Ubfd1-201ENSMUST00000033158 Hspg2Q05793 3707 aaKnown RBP7.07□□□□□ -1.28
Ubfd1-201ENSMUST00000033158 Ryr1E9PZQ0 5035 aa7.06□□□□□ -1.28
Ubfd1-201ENSMUST00000033158 Krtap1-4Q3V2D6 188 aa7.04□□□□□ -1.28
Ubfd1-201ENSMUST00000033158 Xirp2Q4U4S6 3784 aa7.02□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 Gm6358A0A087WPH4 74 aa7.02□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 BsnO88737 3942 aa7.01□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 Krtap7-1Q9D3I6 87 aa7□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 Csmd3Q80T79 3707 aa6.98□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 LorP18165 486 aa6.97□□□□□ -1.29
Ubfd1-201ENSMUST00000033158 TnxbO35452 4006 aa6.94□□□□□ -1.3
Ubfd1-201ENSMUST00000033158 Gm18596A0A1W2P860 280 aa6.91□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms