RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Chtf8P0CG14 533 aa6.61□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Wfdc10Q3V2J9 124 aa6.61□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Chchd10Q7TNL9 138 aa6.61□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Gm4707V9GXN5 68 aa6.61□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Dnah5Q8VHE6 4621 aa6.6□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Gm10642Q3TWM1 71 aa6.6□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Gm12353A2AGJ4 60 aa6.6□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Gm20661K7N787 53 aa6.6□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Defb38Q7TNV7 63 aa6.59□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 Gm37013Q8K491 104 aa6.59□□□□□ -1.35
Ptcd1-201ENSMUST00000031628 A0A286YE49 62 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Igkv3-5A0A140T8M6 119 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Zcchc13Q9D548 170 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 FcgbpE9Q0B5 2583 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Gm10267M0QWD8 85 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Anapc11Q9CPX9 84 aa6.58□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Gm10139O88245 57 aa6.57□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Znf706Q9D115 76 aaKnown RBP6.56□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 6030445D17RikE9Q8F9 148 aa6.54□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Mp68P56379 58 aa6.53□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Krtap10-4Q08EG8 221 aa6.53□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 PlecQ9QXS1 4691 aaKnown RBP6.53□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 1600014C23RikQ9DAX4 101 aa6.53□□□□□ -1.36
Ptcd1-201ENSMUST00000031628 Dnah7cA0A087WR13 4024 aa6.51□□□□□ -1.37
Ptcd1-201ENSMUST00000031628 Q8BGJ3 129 aa6.51□□□□□ -1.37
Ptcd1-201ENSMUST00000031628 Adm2Q7TNK8 150 aa6.51□□□□□ -1.37
Ptcd1-201ENSMUST00000031628 Limd2Q8BGB5 128 aa6.48□□□□□ -1.37
Ptcd1-201ENSMUST00000031628 Prm2P07978 107 aa6.46□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Gm27235Q3UW50 83 aa6.46□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Gm9918Q8BUR5 174 aa6.45□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Defb11Q8R2I7 77 aa6.44□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Dnah7aE9Q0T8 4024 aa6.43□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Ly6g6cQ9Z1Q4 126 aa6.42□□□□□ -1.38
Ptcd1-201ENSMUST00000031628 Gm2310J3QNJ2 377 aa6.39□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Uqcr11Q9CPX8 56 aa6.39□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Wfdc3Q14AE4 130 aa6.38□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Defb39Q70KL3 74 aa6.38□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 2310050C09RikG5E8Z3 280 aa6.38□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Gm10065F6TJM2 114 aa6.37□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Krtap29-1A2A5X4 342 aa6.36□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Krtap13O88375 197 aa6.35□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Stard9Q80TF6 4561 aa6.35□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Q8K1L6 76 aa6.34□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 Romo1P60603 79 aa6.34□□□□□ -1.39
Ptcd1-201ENSMUST00000031628 NbdyA0A0N4SUI7 68 aa6.32□□□□□ -1.4
Ptcd1-201ENSMUST00000031628 Krtap14O08640 167 aa6.32□□□□□ -1.4
Ptcd1-201ENSMUST00000031628 Pla2g10Q9QXX3 151 aa6.32□□□□□ -1.4
Ptcd1-201ENSMUST00000031628 Spaca4Q80ZQ0 127 aa6.32□□□□□ -1.4
Ptcd1-201ENSMUST00000031628 Defb13Q8R2I4 64 aa6.3□□□□□ -1.4
Ptcd1-201ENSMUST00000031628 Gm2696A0A1W2P709 240 aa6.27□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Hectd4E9Q2E4 4418 aa6.26□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Vps13dB1ART2 4390 aa6.26□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Lrp1bQ9JI18 4599 aa6.25□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Gm16253D3Z167 63 aa6.25□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Pkd1O08852 4293 aa6.24□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Gm21798J3QNU5 87 aa6.23□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Gpr15lA0A0B4J1N3 78 aa6.23□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Tnp2P11378 117 aa6.22□□□□□ -1.41
Ptcd1-201ENSMUST00000031628 Dnah2P0C6F1 4456 aa6.18□□□□□ -1.42
Ptcd1-201ENSMUST00000031628 Gm10999F6Q4M4 69 aa6.17□□□□□ -1.42
Ptcd1-201ENSMUST00000031628 ApobE9Q414 4505 aa6.16□□□□□ -1.42
Ptcd1-201ENSMUST00000031628 Defb1P56386 69 aa6.15□□□□□ -1.42
Ptcd1-201ENSMUST00000031628 RetnlbQ99P86 105 aa6.1□□□□□ -1.43
Ptcd1-201ENSMUST00000031628 Pkhd1E9PZ36 4059 aa6.08□□□□□ -1.44
Ptcd1-201ENSMUST00000031628 Ryr3A2AGL3 4863 aa6.05□□□□□ -1.44
Ptcd1-201ENSMUST00000031628 Fat1A0A1L1SQU7 4645 aa6.02□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 CriptO70333 101 aa6□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Dync1h1Q9JHU4 4644 aaKnown RBP5.99□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Gm21887J3QQ04 176 aa5.98□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Fat2Q5F226 4351 aa5.98□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Ndufaf8A2AMZ4 74 aa5.97□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Vps13bQ80TY5 3993 aa5.97□□□□□ -1.45
Ptcd1-201ENSMUST00000031628 Lrp1Q91ZX7 4545 aaKnown RBP5.96□□□□□ -1.46
Ptcd1-201ENSMUST00000031628 Gm3880A0A1B0GSB3 72 aa5.95□□□□□ -1.46
Ptcd1-201ENSMUST00000031628 SacsQ9JLC8 4582 aa5.92□□□□□ -1.46
Ptcd1-201ENSMUST00000031628 Pkhd1l1Q80ZA4 4249 aa5.89□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 2310079G19RikQ9D6L6 185 aa5.88□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 Gm4491E0CX42 125 aa5.88□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 Krtap3-2Q9D638 99 aa5.87□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 Krtap3-3Q9D7P0 99 aa5.87□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 Gm20537G3UYK7 97 aa5.85□□□□□ -1.47
Ptcd1-201ENSMUST00000031628 4930507D05RikQ8C9C9 103 aa5.83□□□□□ -1.48
Ptcd1-201ENSMUST00000031628 Ryr2E9Q401 4966 aaKnown RBP5.81□□□□□ -1.48
Ptcd1-201ENSMUST00000031628 D6Ertd527eA0A0N4SWI3 464 aa5.8□□□□□ -1.48
Ptcd1-201ENSMUST00000031628 Gm11939A2A592 99 aa5.78□□□□□ -1.48
Ptcd1-201ENSMUST00000031628 Gm9736A0A1W2P7N1 277 aa5.77□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Mycbp2Q7TPH6 4711 aa5.75□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 A930033H14RikG5E8X6 103 aa5.74□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Rnase13Q5GAM7 153 aa5.74□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Fat3Q8BNA6 4555 aa5.74□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Kmt2cQ8BRH4 4903 aa5.73□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Abca13Q5SSE9 5034 aa5.72□□□□□ -1.49
Ptcd1-201ENSMUST00000031628 Gm9112A2AI92 75 aa5.68□□□□□ -1.5
Ptcd1-201ENSMUST00000031628 Ryr1E9PZQ0 5035 aa5.67□□□□□ -1.5
Ptcd1-201ENSMUST00000031628 Rps29P62274 56 aa5.65□□□□□ -1.5
Ptcd1-201ENSMUST00000031628 Gm5965D3Z724 196 aa5.65□□□□□ -1.51
Ptcd1-201ENSMUST00000031628 Krtap15-1Q9QZU5 150 aa5.65□□□□□ -1.51
Ptcd1-201ENSMUST00000031628 Krtap19-5O08632 62 aa5.64□□□□□ -1.51
Ptcd1-201ENSMUST00000031628 Gm5767A0A0J9YTU8 78 aa5.61□□□□□ -1.51
Ptcd1-201ENSMUST00000031628 Dnah8Q91XQ0 4731 aa5.6□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms