RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Gm10160F6Y577 67 aa10.75□□□□□ -0.69
Ptpra-201ENSMUST00000028769 PlecQ9QXS1 4691 aaKnown RBP10.73□□□□□ -0.69
Ptpra-201ENSMUST00000028769 Sec61gP60060 68 aa10.71□□□□□ -0.69
Ptpra-201ENSMUST00000028769 Dnah7cA0A087WR13 4024 aa10.71□□□□□ -0.69
Ptpra-201ENSMUST00000028769 Krtap13O88375 197 aa10.71□□□□□ -0.69
Ptpra-201ENSMUST00000028769 Defb13Q8R2I4 64 aa10.69□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Gm20604F8WIA3 75 aa10.68□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Spaca4Q80ZQ0 127 aa10.68□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Gm9918Q8BUR5 174 aa10.68□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Phxr4P15974 95 aa10.67□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Krtap10-10A0A1W2P7T6 217 aa10.67□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Gm10065F6TJM2 114 aa10.66□□□□□ -0.7
Ptpra-201ENSMUST00000028769 Q8K1L6 76 aa10.65□□□□□ -0.71
Ptpra-201ENSMUST00000028769 2310050C09RikG5E8Z3 280 aa10.64□□□□□ -0.71
Ptpra-201ENSMUST00000028769 SptssbQ925E8 76 aa10.64□□□□□ -0.71
Ptpra-201ENSMUST00000028769 AW011738F6S7Q2 159 aa10.63□□□□□ -0.71
Ptpra-201ENSMUST00000028769 Krtap29-1A2A5X4 342 aa10.62□□□□□ -0.71
Ptpra-201ENSMUST00000028769 Gm20661K7N787 53 aa10.62□□□□□ -0.71
Ptpra-201ENSMUST00000028769 Krtap14O08640 167 aa10.6□□□□□ -0.71
Ptpra-201ENSMUST00000028769 NbdyA0A0N4SUI7 68 aa10.59□□□□□ -0.71
Ptpra-201ENSMUST00000028769 TnxbO35452 4006 aa10.57□□□□□ -0.72
Ptpra-201ENSMUST00000028769 Gm21798J3QNU5 87 aa10.55□□□□□ -0.72
Ptpra-201ENSMUST00000028769 Dnah7aE9Q0T8 4024 aa10.54□□□□□ -0.72
Ptpra-201ENSMUST00000028769 Cypt14J3QPF7 87 aa10.54□□□□□ -0.72
Ptpra-201ENSMUST00000028769 Znf706Q9D115 76 aaKnown RBP10.53□□□□□ -0.72
Ptpra-201ENSMUST00000028769 Stard9Q80TF6 4561 aa10.52□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Dync2h1Q45VK7 4306 aa10.51□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Gpr15lA0A0B4J1N3 78 aa10.5□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Gm2696A0A1W2P709 240 aa10.5□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Gm16253D3Z167 63 aa10.5□□□□□ -0.73
Ptpra-201ENSMUST00000028769 4933415A04RikQ9D443 101 aa10.5□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Defb1P56386 69 aa10.47□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Gm10999F6Q4M4 69 aa10.46□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Cypt15B1AXS0 87 aa10.46□□□□□ -0.73
Ptpra-201ENSMUST00000028769 Ccdc179J3QM76 67 aa10.43□□□□□ -0.74
Ptpra-201ENSMUST00000028769 Tnp2P11378 117 aa10.37□□□□□ -0.75
Ptpra-201ENSMUST00000028769 Hectd4E9Q2E4 4418 aa10.37□□□□□ -0.75
Ptpra-201ENSMUST00000028769 Lrp1bQ9JI18 4599 aa10.37□□□□□ -0.75
Ptpra-201ENSMUST00000028769 Sox16Q62247 57 aa10.35□□□□□ -0.75
Ptpra-201ENSMUST00000028769 Defb11Q8R2I7 77 aa10.34□□□□□ -0.75
Ptpra-201ENSMUST00000028769 Q8BGJ3 129 aa10.33□□□□□ -0.76
Ptpra-201ENSMUST00000028769 Ndufs5Q99LY9 106 aa10.33□□□□□ -0.76
Ptpra-201ENSMUST00000028769 RetnlbQ99P86 105 aa10.26□□□□□ -0.77
Ptpra-201ENSMUST00000028769 Vps13dB1ART2 4390 aa10.26□□□□□ -0.77
Ptpra-201ENSMUST00000028769 Ndufb1P0DN34 57 aa10.26□□□□□ -0.77
Ptpra-201ENSMUST00000028769 Gm3646F6S692 53 aa10.22□□□□□ -0.77
Ptpra-201ENSMUST00000028769 2310034C09RikQ9D746 214 aa10.21□□□□□ -0.77
Ptpra-201ENSMUST00000028769 Pkd1O08852 4293 aa10.2□□□□□ -0.78
Ptpra-201ENSMUST00000028769 ApobE9Q414 4505 aa10.09□□□□□ -0.79
Ptpra-201ENSMUST00000028769 Dnah2P0C6F1 4456 aa10.08□□□□□ -0.8
Ptpra-201ENSMUST00000028769 1700042G07RikB1AUF7 90 aa10.08□□□□□ -0.8
Ptpra-201ENSMUST00000028769 Uqcr11Q9CPX8 56 aa10.05□□□□□ -0.8
Ptpra-201ENSMUST00000028769 Gm26620Q9CY65 116 aa10.05□□□□□ -0.8
Ptpra-201ENSMUST00000028769 Limd2Q8BGB5 128 aa10.04□□□□□ -0.8
Ptpra-201ENSMUST00000028769 OxtP35454 125 aa10.02□□□□□ -0.81
Ptpra-201ENSMUST00000028769 Gm10643Q3URG9 111 aa10.02□□□□□ -0.81
Ptpra-201ENSMUST00000028769 Ryr3A2AGL3 4863 aa9.99□□□□□ -0.81
Ptpra-201ENSMUST00000028769 Pkhd1E9PZ36 4059 aa9.93□□□□□ -0.82
Ptpra-201ENSMUST00000028769 Vps13bQ80TY5 3993 aa9.92□□□□□ -0.82
Ptpra-201ENSMUST00000028769 Gm4491E0CX42 125 aa9.91□□□□□ -0.82
Ptpra-201ENSMUST00000028769 Lrp1Q91ZX7 4545 aaKnown RBP9.91□□□□□ -0.82
Ptpra-201ENSMUST00000028769 2310079G19RikQ9D6L6 185 aa9.9□□□□□ -0.83
Ptpra-201ENSMUST00000028769 Fat1A0A1L1SQU7 4645 aa9.88□□□□□ -0.83
Ptpra-201ENSMUST00000028769 4930507D05RikQ8C9C9 103 aa9.85□□□□□ -0.83
Ptpra-201ENSMUST00000028769 Gm9821Q8K076 103 aa9.82□□□□□ -0.84
Ptpra-201ENSMUST00000028769 Krtap3-2Q9D638 99 aa9.82□□□□□ -0.84
Ptpra-201ENSMUST00000028769 Krtap3-3Q9D7P0 99 aa9.82□□□□□ -0.84
Ptpra-201ENSMUST00000028769 Fat2Q5F226 4351 aa9.82□□□□□ -0.84
Ptpra-201ENSMUST00000028769 D6Ertd527eA0A0N4SWI3 464 aa9.78□□□□□ -0.84
Ptpra-201ENSMUST00000028769 Dync1h1Q9JHU4 4644 aaKnown RBP9.76□□□□□ -0.85
Ptpra-201ENSMUST00000028769 SacsQ9JLC8 4582 aa9.73□□□□□ -0.85
Ptpra-201ENSMUST00000028769 Pkhd1l1Q80ZA4 4249 aa9.68□□□□□ -0.86
Ptpra-201ENSMUST00000028769 Gm9736A0A1W2P7N1 277 aa9.67□□□□□ -0.86
Ptpra-201ENSMUST00000028769 Gm11939A2A592 99 aa9.67□□□□□ -0.86
Ptpra-201ENSMUST00000028769 Gm3880A0A1B0GSB3 72 aa9.65□□□□□ -0.87
Ptpra-201ENSMUST00000028769 A930033H14RikG5E8X6 103 aa9.63□□□□□ -0.87
Ptpra-201ENSMUST00000028769 Fat3Q8BNA6 4555 aa9.58□□□□□ -0.88
Ptpra-201ENSMUST00000028769 CriptO70333 101 aa9.55□□□□□ -0.88
Ptpra-201ENSMUST00000028769 Mycbp2Q7TPH6 4711 aa9.54□□□□□ -0.88
Ptpra-201ENSMUST00000028769 Krtap15-1Q9QZU5 150 aa9.51□□□□□ -0.89
Ptpra-201ENSMUST00000028769 Gm20537G3UYK7 97 aa9.48□□□□□ -0.89
Ptpra-201ENSMUST00000028769 Gm5965D3Z724 196 aa9.48□□□□□ -0.89
Ptpra-201ENSMUST00000028769 Cox6b2Q80ZN9 88 aa9.45□□□□□ -0.9
Ptpra-201ENSMUST00000028769 Abca13Q5SSE9 5034 aa9.44□□□□□ -0.9
Ptpra-201ENSMUST00000028769 Gm5767A0A0J9YTU8 78 aa9.42□□□□□ -0.9
Ptpra-201ENSMUST00000028769 Gm12216A0A1W2P827 62 aa9.41□□□□□ -0.9
Ptpra-201ENSMUST00000028769 Gm10382Q3V0T5 144 aa9.41□□□□□ -0.9
Ptpra-201ENSMUST00000028769 Rps29P62274 56 aa9.35□□□□□ -0.91
Ptpra-201ENSMUST00000028769 Kmt2cQ8BRH4 4903 aa9.35□□□□□ -0.91
Ptpra-201ENSMUST00000028769 Rnase13Q5GAM7 153 aa9.33□□□□□ -0.92
Ptpra-201ENSMUST00000028769 Krtap19-5O08632 62 aa9.33□□□□□ -0.92
Ptpra-201ENSMUST00000028769 Gm17606F6ZL36 78 aa9.31□□□□□ -0.92
Ptpra-201ENSMUST00000028769 Pla2g10Q9QXX3 151 aa9.24□□□□□ -0.93
Ptpra-201ENSMUST00000028769 Ryr1E9PZQ0 5035 aa9.23□□□□□ -0.93
Ptpra-201ENSMUST00000028769 Ryr2E9Q401 4966 aaKnown RBP9.18□□□□□ -0.94
Ptpra-201ENSMUST00000028769 Gm9955Q8CEJ8 102 aa9.14□□□□□ -0.95
Ptpra-201ENSMUST00000028769 HydinQ80W93 5154 aa9.12□□□□□ -0.95
Ptpra-201ENSMUST00000028769 Rpl37Q9D823 97 aa9.08□□□□□ -0.96
Ptpra-201ENSMUST00000028769 Dnah8Q91XQ0 4731 aa9.06□□□□□ -0.96
Ptpra-201ENSMUST00000028769 Kiaa1109A2AAE1 5005 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms