RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Krtap10-10A0A1W2P7T6 217 aa12.69□□□□□ -0.38
Nckap1-201ENSMUST00000028386 Lama5Q61001 3718 aa12.66□□□□□ -0.38
Nckap1-201ENSMUST00000028386 Gm21798J3QNU5 87 aa12.64□□□□□ -0.39
Nckap1-201ENSMUST00000028386 Gm16253D3Z167 63 aa12.63□□□□□ -0.39
Nckap1-201ENSMUST00000028386 Gm9821Q8K076 103 aa12.61□□□□□ -0.39
Nckap1-201ENSMUST00000028386 Krtap29-1A2A5X4 342 aa12.61□□□□□ -0.39
Nckap1-201ENSMUST00000028386 Krtap15-1Q9QZU5 150 aa12.58□□□□□ -0.39
Nckap1-201ENSMUST00000028386 Gm4491E0CX42 125 aa12.58□□□□□ -0.4
Nckap1-201ENSMUST00000028386 Col7a1Q63870 2944 aa12.5□□□□□ -0.41
Nckap1-201ENSMUST00000028386 Krtap14O08640 167 aa12.5□□□□□ -0.41
Nckap1-201ENSMUST00000028386 Tenm2Q9WTS5 2764 aa12.48□□□□□ -0.41
Nckap1-201ENSMUST00000028386 Gm37013Q8K491 104 aa12.46□□□□□ -0.41
Nckap1-201ENSMUST00000028386 Gm10643Q3URG9 111 aa12.45□□□□□ -0.42
Nckap1-201ENSMUST00000028386 Gm2696A0A1W2P709 240 aa12.4□□□□□ -0.42
Nckap1-201ENSMUST00000028386 VwfQ8CIZ8 2813 aa12.34□□□□□ -0.43
Nckap1-201ENSMUST00000028386 Muc4Q8JZM8 3443 aa12.33□□□□□ -0.44
Nckap1-201ENSMUST00000028386 Mp68P56379 58 aa12.32□□□□□ -0.44
Nckap1-201ENSMUST00000028386 Gm3880A0A1B0GSB3 72 aa12.31□□□□□ -0.44
Nckap1-201ENSMUST00000028386 Spink7Q6IE32 76 aa12.24□□□□□ -0.45
Nckap1-201ENSMUST00000028386 Fbn1Q61554 2873 aaKnown RBP12.21□□□□□ -0.45
Nckap1-201ENSMUST00000028386 Svep1A2AVA0 3567 aa12.18□□□□□ -0.46
Nckap1-201ENSMUST00000028386 Gm5767A0A0J9YTU8 78 aa12.17□□□□□ -0.46
Nckap1-201ENSMUST00000028386 Tnp2P11378 117 aa12.14□□□□□ -0.47
Nckap1-201ENSMUST00000028386 Gm9955Q8CEJ8 102 aa12.13□□□□□ -0.47
Nckap1-201ENSMUST00000028386 Gm2310J3QNJ2 377 aa12.06□□□□□ -0.48
Nckap1-201ENSMUST00000028386 Gm884A2A9H6 3643 aa12.06□□□□□ -0.48
Nckap1-201ENSMUST00000028386 Fam229aB2KGE5 128 aa11.96□□□□□ -0.49
Nckap1-201ENSMUST00000028386 Sec61bQ9CQS8 96 aaKnown RBP11.96□□□□□ -0.5
Nckap1-201ENSMUST00000028386 Muc6Q80T03 2850 aa11.92□□□□□ -0.5
Nckap1-201ENSMUST00000028386 CriptO70333 101 aa11.91□□□□□ -0.5
Nckap1-201ENSMUST00000028386 Megf8P60882 2789 aa11.9□□□□□ -0.5
Nckap1-201ENSMUST00000028386 Cmya5Q70KF4 3739 aa11.9□□□□□ -0.5
Nckap1-201ENSMUST00000028386 Gm3646F6S692 53 aa11.89□□□□□ -0.51
Nckap1-201ENSMUST00000028386 Pla2g10Q9QXX3 151 aa11.89□□□□□ -0.51
Nckap1-201ENSMUST00000028386 SmcpP15265 143 aa11.85□□□□□ -0.51
Nckap1-201ENSMUST00000028386 Csmd2V9GX34 3611 aa11.73□□□□□ -0.53
Nckap1-201ENSMUST00000028386 Gm5965D3Z724 196 aa11.69□□□□□ -0.54
Nckap1-201ENSMUST00000028386 Rps29P62274 56 aa11.68□□□□□ -0.54
Nckap1-201ENSMUST00000028386 BC029722A0A0N4SW31 51 aa11.68□□□□□ -0.54
Nckap1-201ENSMUST00000028386 Rpl37Q9D823 97 aa11.67□□□□□ -0.54
Nckap1-201ENSMUST00000028386 4933415A04RikQ9D443 101 aa11.63□□□□□ -0.55
Nckap1-201ENSMUST00000028386 Gm19426M0QWC7 77 aa11.63□□□□□ -0.55
Nckap1-201ENSMUST00000028386 Cox6b2Q80ZN9 88 aa11.58□□□□□ -0.56
Nckap1-201ENSMUST00000028386 Camk2n1Q6QWF9 78 aa11.56□□□□□ -0.56
Nckap1-201ENSMUST00000028386 D6Ertd527eA0A0N4SWI3 464 aa11.54□□□□□ -0.56
Nckap1-201ENSMUST00000028386 Gm10382Q3V0T5 144 aa11.53□□□□□ -0.56
Nckap1-201ENSMUST00000028386 2310057N15RikQ9D6T8 200 aa11.44□□□□□ -0.58
Nckap1-201ENSMUST00000028386 Romo1P60603 79 aa11.41□□□□□ -0.58
Nckap1-201ENSMUST00000028386 CubnQ9JLB4 3623 aa11.36□□□□□ -0.59
Nckap1-201ENSMUST00000028386 1700042G07RikB1AUF7 90 aa11.35□□□□□ -0.59
Nckap1-201ENSMUST00000028386 Gm20538F6Z9R1 75 aa11.34□□□□□ -0.59
Nckap1-201ENSMUST00000028386 LystP97412 3788 aa11.27□□□□□ -0.61
Nckap1-201ENSMUST00000028386 Gm9736A0A1W2P7N1 277 aa11.23□□□□□ -0.61
Nckap1-201ENSMUST00000028386 Ank2Q8C8R3 3898 aa11.12□□□□□ -0.63
Nckap1-201ENSMUST00000028386 Gm9918Q8BUR5 174 aa11.1□□□□□ -0.63
Nckap1-201ENSMUST00000028386 2310079G19RikQ9D6L6 185 aa10.9□□□□□ -0.66
Nckap1-201ENSMUST00000028386 A930033H14RikG5E8X6 103 aa10.88□□□□□ -0.67
Nckap1-201ENSMUST00000028386 Gm20537G3UYK7 97 aa10.84□□□□□ -0.67
Nckap1-201ENSMUST00000028386 Gm21887J3QQ04 176 aa10.77□□□□□ -0.68
Nckap1-201ENSMUST00000028386 Krtap19-5O08632 62 aa10.68□□□□□ -0.7
Nckap1-201ENSMUST00000028386 Dnah14A0A140LIJ4 4489 aa10.66□□□□□ -0.7
Nckap1-201ENSMUST00000028386 Gm11939A2A592 99 aa10.64□□□□□ -0.71
Nckap1-201ENSMUST00000028386 Gm10318A0A1W2P728 225 aa10.63□□□□□ -0.71
Nckap1-201ENSMUST00000028386 Gm17416Q30KP4 66 aa10.62□□□□□ -0.71
Nckap1-201ENSMUST00000028386 B930094E09RikQ8C4T2 136 aa10.5□□□□□ -0.73
Nckap1-201ENSMUST00000028386 Hspg2Q05793 3707 aaKnown RBP10.48□□□□□ -0.73
Nckap1-201ENSMUST00000028386 2210017I01RikA0A0A6YVV1 95 aa10.48□□□□□ -0.73
Nckap1-201ENSMUST00000028386 Csmd3Q80T79 3707 aa10.46□□□□□ -0.74
Nckap1-201ENSMUST00000028386 Crct1Q6PAI5 102 aa10.45□□□□□ -0.74
Nckap1-201ENSMUST00000028386 Xirp2Q4U4S6 3784 aa10.39□□□□□ -0.75
Nckap1-201ENSMUST00000028386 Ndufaf8A2AMZ4 74 aa10.33□□□□□ -0.76
Nckap1-201ENSMUST00000028386 Dnah10D3YYQ8 4591 aa10.32□□□□□ -0.76
Nckap1-201ENSMUST00000028386 Krtap3-2Q9D638 99 aa10.25□□□□□ -0.77
Nckap1-201ENSMUST00000028386 Krtap3-3Q9D7P0 99 aa10.25□□□□□ -0.77
Nckap1-201ENSMUST00000028386 Tnp1P10856 55 aa10.24□□□□□ -0.77
Nckap1-201ENSMUST00000028386 BsnO88737 3942 aa10.21□□□□□ -0.77
Nckap1-201ENSMUST00000028386 Huwe1Q7TMY8 4377 aaKnown RBP10.21□□□□□ -0.78
Nckap1-201ENSMUST00000028386 Krtap13-1Q8K198 168 aa10.18□□□□□ -0.78
Nckap1-201ENSMUST00000028386 Gm40193A0A1B0GT39 78 aa10.13□□□□□ -0.79
Nckap1-201ENSMUST00000028386 Dnah5Q8VHE6 4621 aa10.13□□□□□ -0.79
Nckap1-201ENSMUST00000028386 Ryr1E9PZQ0 5035 aa10.07□□□□□ -0.8
Nckap1-201ENSMUST00000028386 PlecQ9QXS1 4691 aaKnown RBP10□□□□□ -0.81
Nckap1-201ENSMUST00000028386 Stard9Q80TF6 4561 aa9.94□□□□□ -0.82
Nckap1-201ENSMUST00000028386 Krtap3-1A2A591 98 aa9.9□□□□□ -0.82
Nckap1-201ENSMUST00000028386 Gm17402F6Z0L5 76 aa9.88□□□□□ -0.83
Nckap1-201ENSMUST00000028386 Vps13dB1ART2 4390 aa9.87□□□□□ -0.83
Nckap1-201ENSMUST00000028386 Prm2P07978 107 aa9.86□□□□□ -0.83
Nckap1-201ENSMUST00000028386 Gm9112A2AI92 75 aa9.74□□□□□ -0.85
Nckap1-201ENSMUST00000028386 Dnah17Q69Z23 4481 aa9.73□□□□□ -0.85
Nckap1-201ENSMUST00000028386 TnxbO35452 4006 aa9.71□□□□□ -0.85
Nckap1-201ENSMUST00000028386 Gm19668J3QMD1 248 aa9.7□□□□□ -0.86
Nckap1-201ENSMUST00000028386 Dnah7bL7N1Y0 4068 aa9.69□□□□□ -0.86
Nckap1-201ENSMUST00000028386 Mycbp2Q7TPH6 4711 aa9.66□□□□□ -0.86
Nckap1-201ENSMUST00000028386 Dnah11E9Q7N9 4488 aa9.64□□□□□ -0.87
Nckap1-201ENSMUST00000028386 Dnah9B1AR51 4484 aa9.63□□□□□ -0.87
Nckap1-201ENSMUST00000028386 Ryr3A2AGL3 4863 aa9.47□□□□□ -0.89
Nckap1-201ENSMUST00000028386 HydinQ80W93 5154 aa9.46□□□□□ -0.89
Nckap1-201ENSMUST00000028386 Gm18596A0A1W2P860 280 aa9.44□□□□□ -0.9
Nckap1-201ENSMUST00000028386 Lrp1bQ9JI18 4599 aa9.43□□□□□ -0.9
Nckap1-201ENSMUST00000028386 PrkdcP97313 4128 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms