RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Anapc11Q9CPX9 84 aa5.15□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Chtf8P0CG14 533 aa5.14□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 FasnP19096 2504 aaKnown RBP5.13□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Gm21798J3QNU5 87 aa5.12□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Spink7Q6IE32 76 aa5.11□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 LystP97412 3788 aa5.11□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Gm9955Q8CEJ8 102 aa5.1□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Fbn1Q61554 2873 aaKnown RBP5.1□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 Gm2310J3QNJ2 377 aa5.09□□□□□ -1.59
Sf3b1-201ENSMUST00000027127 2310034C09RikQ9D746 214 aa5.09□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Tnp2P11378 117 aa5.08□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 ApcQ61315 2845 aa5.07□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 2310050C09RikG5E8Z3 280 aa5.07□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 TgO08710 2766 aa5.06□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Helz2E9QAM5 2947 aaKnown RBP5.05□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Col7a1Q63870 2944 aa5.05□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Tenm1Q9WTS4 2731 aa5.05□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Gm9507D3Z5T3 223 aa5.05□□□□□ -1.6
Sf3b1-201ENSMUST00000027127 Krtap14O08640 167 aa5.02□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Gm3880A0A1B0GSB3 72 aa5.02□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Pkd1l1Q8R526 2615 aa5.02□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 HrnrQ8VHD8 2496 aa5□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Gm4491E0CX42 125 aa4.99□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Camk2n1Q6QWF9 78 aa4.99□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Fam229aB2KGE5 128 aa4.98□□□□□ -1.61
Sf3b1-201ENSMUST00000027127 Krtap13O88375 197 aa4.94□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 Rps29P62274 56 aa4.92□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 Krtap15-1Q9QZU5 150 aa4.92□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 Sec61bQ9CQS8 96 aaKnown RBP4.91□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 Muc4Q8JZM8 3443 aa4.91□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 BsnO88737 3942 aa4.9□□□□□ -1.62
Sf3b1-201ENSMUST00000027127 Krtap10-4Q08EG8 221 aa4.88□□□□□ -1.63
Sf3b1-201ENSMUST00000027127 Xirp2Q4U4S6 3784 aa4.85□□□□□ -1.63
Sf3b1-201ENSMUST00000027127 4933415A04RikQ9D443 101 aa4.84□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 FcgbpE9Q0B5 2583 aa4.83□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Dnah14A0A140LIJ4 4489 aa4.82□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Dnah17Q69Z23 4481 aa4.82□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Csmd2V9GX34 3611 aa4.81□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Gm9918Q8BUR5 174 aa4.8□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Gm19426M0QWC7 77 aa4.79□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Rpl37Q9D823 97 aa4.78□□□□□ -1.64
Sf3b1-201ENSMUST00000027127 Gm5767A0A0J9YTU8 78 aa4.77□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Krtap10-10A0A1W2P7T6 217 aa4.77□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 BC029722A0A0N4SW31 51 aa4.77□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Romo1P60603 79 aa4.76□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 VwfQ8CIZ8 2813 aa4.75□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 CubnQ9JLB4 3623 aa4.74□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Gm2696A0A1W2P709 240 aa4.74□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Gm3646F6S692 53 aa4.73□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Dnah3Q8BW94 4083 aa4.72□□□□□ -1.65
Sf3b1-201ENSMUST00000027127 Huwe1Q7TMY8 4377 aaKnown RBP4.7□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 Tenm2Q9WTS5 2764 aa4.68□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 Kmt2aP55200 3966 aa4.68□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 TnxbO35452 4006 aa4.68□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 Gm10382Q3V0T5 144 aa4.67□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 A930033H14RikG5E8X6 103 aa4.67□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 D6Ertd527eA0A0N4SWI3 464 aa4.66□□□□□ -1.66
Sf3b1-201ENSMUST00000027127 PlecQ9QXS1 4691 aaKnown RBP4.62□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Cox6b2Q80ZN9 88 aa4.62□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 2310079G19RikQ9D6L6 185 aa4.61□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Dnah10D3YYQ8 4591 aa4.61□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Dnah6E9Q0B6 4144 aa4.6□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Dnah1E9Q8T7 4250 aa4.6□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 1700042G07RikB1AUF7 90 aa4.6□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Muc6Q80T03 2850 aa4.6□□□□□ -1.67
Sf3b1-201ENSMUST00000027127 Megf8P60882 2789 aa4.56□□□□□ -1.68
Sf3b1-201ENSMUST00000027127 Dync2h1Q45VK7 4306 aa4.54□□□□□ -1.68
Sf3b1-201ENSMUST00000027127 Dnah11E9Q7N9 4488 aa4.54□□□□□ -1.68
Sf3b1-201ENSMUST00000027127 Dnah7bL7N1Y0 4068 aa4.53□□□□□ -1.68
Sf3b1-201ENSMUST00000027127 Vps13dB1ART2 4390 aa4.53□□□□□ -1.68
Sf3b1-201ENSMUST00000027127 Gm11939A2A592 99 aa4.51□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Krtap3-2Q9D638 99 aa4.5□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Krtap3-3Q9D7P0 99 aa4.5□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Dnah9B1AR51 4484 aa4.49□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Hspg2Q05793 3707 aaKnown RBP4.48□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Gm21887J3QQ04 176 aa4.47□□□□□ -1.69
Sf3b1-201ENSMUST00000027127 Gm5965D3Z724 196 aa4.46□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 Dnah5Q8VHE6 4621 aa4.46□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 Gm17416Q30KP4 66 aa4.45□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 Dnah2P0C6F1 4456 aa4.44□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 Krtap19-5O08632 62 aa4.41□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 Tnp1P10856 55 aa4.41□□□□□ -1.7
Sf3b1-201ENSMUST00000027127 PrkdcP97313 4128 aa4.39□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Stard9Q80TF6 4561 aa4.39□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Dync1h1Q9JHU4 4644 aaKnown RBP4.37□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Pkd1O08852 4293 aa4.36□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Gm20537G3UYK7 97 aa4.36□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Ndufaf8A2AMZ4 74 aa4.36□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Gm40193A0A1B0GT39 78 aa4.34□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Gm9736A0A1W2P7N1 277 aa4.34□□□□□ -1.71
Sf3b1-201ENSMUST00000027127 Csmd3Q80T79 3707 aa4.33□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 2210017I01RikA0A0A6YVV1 95 aa4.32□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 ApobE9Q414 4505 aa4.32□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 Fras1Q80T14 4010 aa4.31□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 A0A1Y7VLE6 161 aa4.3□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 Hectd4E9Q2E4 4418 aa4.28□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 Dnah7cA0A087WR13 4024 aa4.28□□□□□ -1.72
Sf3b1-201ENSMUST00000027127 Lrp1bQ9JI18 4599 aa4.27□□□□□ -1.73
Sf3b1-201ENSMUST00000027127 Gm9112A2AI92 75 aa4.26□□□□□ -1.73
Sf3b1-201ENSMUST00000027127 SacsQ9JLC8 4582 aa4.26□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms