RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Coa6Q8BGD8 79 aa5.52□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Q8K1L6 76 aa5.52□□□□□ -1.53
Cldn1-201ENSMUST00000023154 1700074P13RikQ9D9G7 251 aa5.51□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Fat1A0A1L1SQU7 4645 aa5.5□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Ryr3A2AGL3 4863 aa5.49□□□□□ -1.53
Cldn1-201ENSMUST00000023154 A530084C06RikQ3UTW2 186 aa5.49□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Gm10267M0QWD8 85 aa5.48□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Dync1h1Q9JHU4 4644 aaKnown RBP5.47□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Spint4Q9D263 159 aa5.47□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Atox1O08997 68 aaKnown RBP5.46□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Dph3Q8K0W9 82 aa5.46□□□□□ -1.53
Cldn1-201ENSMUST00000023154 Defb39Q70KL3 74 aa5.46□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Defb38Q7TNV7 63 aa5.46□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Cypt14J3QPF7 87 aa5.45□□□□□ -1.54
Cldn1-201ENSMUST00000023154 OxtP35454 125 aa5.45□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Coa5Q99M07 74 aa5.44□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Gm10197F6QEY5 67 aa5.43□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Fat2Q5F226 4351 aa5.43□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Gm2310J3QNJ2 377 aa5.42□□□□□ -1.54
Cldn1-201ENSMUST00000023154 H2al1aQ5M8Q2 105 aa5.42□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Znf706Q9D115 76 aaKnown RBP5.42□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Gm20604F8WIA3 75 aa5.41□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Bean1Q9EQG5 255 aa5.4□□□□□ -1.54
Cldn1-201ENSMUST00000023154 Chtf8P0CG14 533 aa5.39□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Gm16253D3Z167 63 aa5.38□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Gm28374F6SG70 93 aa5.38□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Ccdc179J3QM76 67 aa5.38□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Cdc42se1Q8BHL7 80 aa5.38□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Mrpl55Q9CZ83 127 aa5.38□□□□□ -1.55
Cldn1-201ENSMUST00000023154 SacsQ9JLC8 4582 aa5.37□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Ryr2E9Q401 4966 aaKnown RBP5.35□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Igkv3-3A0A140T8Q0 119 aa5.35□□□□□ -1.55
Cldn1-201ENSMUST00000023154 Spaca4Q80ZQ0 127 aa5.33□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Wfdc3Q14AE4 130 aa5.33□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Gm10337F7DEP7 55 aa5.32□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Gm10160F6Y577 67 aa5.31□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Defb13Q8R2I4 64 aa5.31□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Kmt2cQ8BRH4 4903 aa5.29□□□□□ -1.56
Cldn1-201ENSMUST00000023154 Vps13bQ80TY5 3993 aa5.26□□□□□ -1.57
Cldn1-201ENSMUST00000023154 RetnlbQ99P86 105 aa5.26□□□□□ -1.57
Cldn1-201ENSMUST00000023154 Pkhd1l1Q80ZA4 4249 aa5.26□□□□□ -1.57
Cldn1-201ENSMUST00000023154 Lrp1Q91ZX7 4545 aaKnown RBP5.25□□□□□ -1.57
Cldn1-201ENSMUST00000023154 Cypt15B1AXS0 87 aa5.25□□□□□ -1.57
Cldn1-201ENSMUST00000023154 Phxr4P15974 95 aa5.25□□□□□ -1.57
Cldn1-201ENSMUST00000023154 H2al1bA0A087WP11 105 aa5.23□□□□□ -1.57
Cldn1-201ENSMUST00000023154 A0A1Y7VJH8 109 aa5.23□□□□□ -1.57
Cldn1-201ENSMUST00000023154 H2al1kJ3QP08 105 aa5.23□□□□□ -1.57
Cldn1-201ENSMUST00000023154 H2al1eQ810S6 105 aa5.23□□□□□ -1.57
Cldn1-201ENSMUST00000023154 H2al1mQ9DAD9 105 aa5.23□□□□□ -1.57
Cldn1-201ENSMUST00000023154 Gm20661K7N787 53 aa5.21□□□□□ -1.58
Cldn1-201ENSMUST00000023154 Gm21798J3QNU5 87 aa5.21□□□□□ -1.58
Cldn1-201ENSMUST00000023154 Ryr1E9PZQ0 5035 aa5.18□□□□□ -1.58
Cldn1-201ENSMUST00000023154 SptssbQ925E8 76 aa5.17□□□□□ -1.58
Cldn1-201ENSMUST00000023154 Gm10999F6Q4M4 69 aa5.16□□□□□ -1.58
Cldn1-201ENSMUST00000023154 Abca13Q5SSE9 5034 aa5.15□□□□□ -1.58
Cldn1-201ENSMUST00000023154 Fat3Q8BNA6 4555 aa5.15□□□□□ -1.58
Cldn1-201ENSMUST00000023154 4933415A04RikQ9D443 101 aa5.12□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Defb1P56386 69 aa5.11□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Q8BGJ3 129 aa5.11□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Dnah8Q91XQ0 4731 aa5.11□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Mycbp2Q7TPH6 4711 aa5.1□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Krtap19-5O08632 62 aa5.1□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Sox16Q62247 57 aa5.09□□□□□ -1.59
Cldn1-201ENSMUST00000023154 Krtap3-2Q9D638 99 aa5.08□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Krtap3-3Q9D7P0 99 aa5.08□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Krtap28-10A0A1Y7VP58 119 aa5.07□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Gm11939A2A592 99 aa5.07□□□□□ -1.6
Cldn1-201ENSMUST00000023154 2310034C09RikQ9D746 214 aa5.06□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Ndufb1P0DN34 57 aa5.06□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Gm9736A0A1W2P7N1 277 aa5.05□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Rps29P62274 56 aa5.04□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Gm10643Q3URG9 111 aa5.04□□□□□ -1.6
Cldn1-201ENSMUST00000023154 Gm7544A0A1Y7VJ58 118 aa5.02□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Gm26620Q9CY65 116 aa5.02□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Krtap4-1Q3UUY3 169 aa5.02□□□□□ -1.61
Cldn1-201ENSMUST00000023154 9230102O04RikA2ASX7 82 aa4.99□□□□□ -1.61
Cldn1-201ENSMUST00000023154 2310079G19RikQ9D6L6 185 aa4.99□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Limd2Q8BGB5 128 aa4.98□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Uqcr11Q9CPX8 56 aa4.98□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Ndufs5Q99LY9 106 aa4.97□□□□□ -1.61
Cldn1-201ENSMUST00000023154 Gm4491E0CX42 125 aa4.96□□□□□ -1.62
Cldn1-201ENSMUST00000023154 A930033H14RikG5E8X6 103 aa4.96□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Gm3646F6S692 53 aa4.96□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Herc2Q4U2R1 4836 aa4.96□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Kiaa1109A2AAE1 5005 aa4.95□□□□□ -1.62
Cldn1-201ENSMUST00000023154 HydinQ80W93 5154 aa4.94□□□□□ -1.62
Cldn1-201ENSMUST00000023154 A0A1Y7VLE6 161 aa4.93□□□□□ -1.62
Cldn1-201ENSMUST00000023154 4930507D05RikQ8C9C9 103 aa4.93□□□□□ -1.62
Cldn1-201ENSMUST00000023154 A030005L19RikA0A1Y7VIU2 113 aa4.93□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Gm5965D3Z724 196 aa4.92□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Dnhd1D3Z2X2 4750 aa4.91□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Birc6O88738 4882 aa4.91□□□□□ -1.62
Cldn1-201ENSMUST00000023154 Gm5767A0A0J9YTU8 78 aa4.91□□□□□ -1.62
Cldn1-201ENSMUST00000023154 D6Ertd527eA0A0N4SWI3 464 aa4.9□□□□□ -1.63
Cldn1-201ENSMUST00000023154 Krtap15-1Q9QZU5 150 aa4.84□□□□□ -1.64
Cldn1-201ENSMUST00000023154 PcloQ9QYX7 5068 aa4.82□□□□□ -1.64
Cldn1-201ENSMUST00000023154 1700042G07RikB1AUF7 90 aa4.81□□□□□ -1.64
Cldn1-201ENSMUST00000023154 Sec61gP60060 68 aa4.79□□□□□ -1.64
Cldn1-201ENSMUST00000023154 Lrp2A2ARV4 4660 aa4.79□□□□□ -1.64
Cldn1-201ENSMUST00000023154 Rpl37Q9D823 97 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms