RNA–Protein interactions for RNA: ENSMUST00000018810.9

Cbx1-201, Transcript of Chromobox protein homolog 1, mousemouse

TSL 1 (best) BASIC

Gene Cbx1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1-201ENSMUST00000018810 Vps13bQ80TY5 3993 aa10.8□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Kmt2cQ8BRH4 4903 aa10.79□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Pcp4P63054 62 aa10.79□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Reg3aO09037 175 aa10.78□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Birc6O88738 4882 aa10.77□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Dnah8Q91XQ0 4731 aa10.77□□□□□ -0.68
Cbx1-201ENSMUST00000018810 Defa21Q8C1P2 93 aa10.76□□□□□ -0.69
Cbx1-201ENSMUST00000018810 B230307C23RikQ8BLB2 64 aa10.75□□□□□ -0.69
Cbx1-201ENSMUST00000018810 Samd13D3YUG0 102 aa10.72□□□□□ -0.69
Cbx1-201ENSMUST00000018810 Scgb1b2O35176 93 aa10.71□□□□□ -0.69
Cbx1-201ENSMUST00000018810 Spink8Q09TK9 105 aa10.71□□□□□ -0.69
Cbx1-201ENSMUST00000018810 BikO70337 150 aa10.69□□□□□ -0.7
Cbx1-201ENSMUST00000018810 Gm11939A2A592 99 aa10.68□□□□□ -0.7
Cbx1-201ENSMUST00000018810 Krtap19-5O08632 62 aa10.68□□□□□ -0.7
Cbx1-201ENSMUST00000018810 Gm16253D3Z167 63 aa10.67□□□□□ -0.7
Cbx1-201ENSMUST00000018810 A0A286YE49 62 aa10.66□□□□□ -0.7
Cbx1-201ENSMUST00000018810 Tmem258P61166 79 aa10.65□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Defb12Q8K4N3 78 aa10.64□□□□□ -0.71
Cbx1-201ENSMUST00000018810 SmcpP15265 143 aa10.63□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Kiaa1109A2AAE1 5005 aa10.62□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Gm2310J3QNJ2 377 aa10.61□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Lce1mQ9CR91 182 aa10.61□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Spaca4Q80ZQ0 127 aa10.6□□□□□ -0.71
Cbx1-201ENSMUST00000018810 Gm19935A0A1B0GSF9 52 aa10.58□□□□□ -0.72
Cbx1-201ENSMUST00000018810 Smlr1J3QMJ4 66 aa10.57□□□□□ -0.72
Cbx1-201ENSMUST00000018810 Smim20D3Z7Q2 69 aa10.56□□□□□ -0.72
Cbx1-201ENSMUST00000018810 PcloQ9QYX7 5068 aa10.55□□□□□ -0.72
Cbx1-201ENSMUST00000018810 Igkv3-3A0A140T8Q0 119 aa10.54□□□□□ -0.72
Cbx1-201ENSMUST00000018810 Fat3Q8BNA6 4555 aa10.54□□□□□ -0.72
Cbx1-201ENSMUST00000018810 Dph3Q8K0W9 82 aa10.52□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Abca13Q5SSE9 5034 aa10.51□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Coa6Q8BGD8 79 aa10.51□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Lrp1Q91ZX7 4545 aaKnown RBP10.5□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Atox1O08997 68 aaKnown RBP10.49□□□□□ -0.73
Cbx1-201ENSMUST00000018810 1700074P13RikQ9D9G7 251 aa10.49□□□□□ -0.73
Cbx1-201ENSMUST00000018810 HydinQ80W93 5154 aa10.47□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Dnhd1D3Z2X2 4750 aa10.46□□□□□ -0.73
Cbx1-201ENSMUST00000018810 Krtap4-1Q3UUY3 169 aa10.44□□□□□ -0.74
Cbx1-201ENSMUST00000018810 Spint4Q9D263 159 aa10.44□□□□□ -0.74
Cbx1-201ENSMUST00000018810 D6Ertd527eA0A0N4SWI3 464 aa10.42□□□□□ -0.74
Cbx1-201ENSMUST00000018810 Pet100P0DJE0 76 aa10.42□□□□□ -0.74
Cbx1-201ENSMUST00000018810 Rps29P62274 56 aa10.42□□□□□ -0.74
Cbx1-201ENSMUST00000018810 Rps28P62858 69 aaKnown RBP10.41□□□□□ -0.74
Cbx1-201ENSMUST00000018810 Cypt15B1AXS0 87 aa10.4□□□□□ -0.75
Cbx1-201ENSMUST00000018810 Mycbp2Q7TPH6 4711 aa10.36□□□□□ -0.75
Cbx1-201ENSMUST00000018810 SnurfQ9WU12 71 aa10.35□□□□□ -0.75
Cbx1-201ENSMUST00000018810 Gm18596A0A1W2P860 280 aa10.35□□□□□ -0.75
Cbx1-201ENSMUST00000018810 A530084C06RikQ3UTW2 186 aa10.35□□□□□ -0.75
Cbx1-201ENSMUST00000018810 Gm10267M0QWD8 85 aa10.33□□□□□ -0.76
Cbx1-201ENSMUST00000018810 Serp1Q9Z1W5 66 aa10.31□□□□□ -0.76
Cbx1-201ENSMUST00000018810 Defb13Q8R2I4 64 aa10.3□□□□□ -0.76
Cbx1-201ENSMUST00000018810 Herc1E9PZP8 4859 aa10.27□□□□□ -0.77
Cbx1-201ENSMUST00000018810 Brk1Q91VR8 75 aa10.26□□□□□ -0.77
Cbx1-201ENSMUST00000018810 Coa5Q99M07 74 aa10.26□□□□□ -0.77
Cbx1-201ENSMUST00000018810 Gm9736A0A1W2P7N1 277 aa10.25□□□□□ -0.77
Cbx1-201ENSMUST00000018810 Chtf8P0CG14 533 aa10.22□□□□□ -0.77
Cbx1-201ENSMUST00000018810 Gm10160F6Y577 67 aa10.17□□□□□ -0.78
Cbx1-201ENSMUST00000018810 Cdc42se1Q8BHL7 80 aa10.17□□□□□ -0.78
Cbx1-201ENSMUST00000018810 Gm26620Q9CY65 116 aa10.11□□□□□ -0.79
Cbx1-201ENSMUST00000018810 Gm10643Q3URG9 111 aa10.05□□□□□ -0.8
Cbx1-201ENSMUST00000018810 Defb38Q7TNV7 63 aa10.05□□□□□ -0.8
Cbx1-201ENSMUST00000018810 Lrp2A2ARV4 4660 aa10.01□□□□□ -0.81
Cbx1-201ENSMUST00000018810 Gm5767A0A0J9YTU8 78 aa10.01□□□□□ -0.81
Cbx1-201ENSMUST00000018810 Gm5965D3Z724 196 aa10.01□□□□□ -0.81
Cbx1-201ENSMUST00000018810 Gm10197F6QEY5 67 aa10.01□□□□□ -0.81
Cbx1-201ENSMUST00000018810 H2al1aQ5M8Q2 105 aa10.01□□□□□ -0.81
Cbx1-201ENSMUST00000018810 Gm21798J3QNU5 87 aa9.93□□□□□ -0.82
Cbx1-201ENSMUST00000018810 Gm10999F6Q4M4 69 aa9.9□□□□□ -0.82
Cbx1-201ENSMUST00000018810 Phxr4P15974 95 aa9.89□□□□□ -0.83
Cbx1-201ENSMUST00000018810 Krtap3-2Q9D638 99 aa9.87□□□□□ -0.83
Cbx1-201ENSMUST00000018810 Krtap3-3Q9D7P0 99 aa9.87□□□□□ -0.83
Cbx1-201ENSMUST00000018810 Q8BGJ3 129 aa9.86□□□□□ -0.83
Cbx1-201ENSMUST00000018810 SvipQ3UZP4 77 aa9.85□□□□□ -0.83
Cbx1-201ENSMUST00000018810 H2al1eQ810S6 105 aa9.81□□□□□ -0.84
Cbx1-201ENSMUST00000018810 A930033H14RikG5E8X6 103 aa9.8□□□□□ -0.84
Cbx1-201ENSMUST00000018810 Gm20661K7N787 53 aa9.8□□□□□ -0.84
Cbx1-201ENSMUST00000018810 2310034C09RikQ9D746 214 aa9.8□□□□□ -0.84
Cbx1-201ENSMUST00000018810 Krtap15-1Q9QZU5 150 aa9.78□□□□□ -0.84
Cbx1-201ENSMUST00000018810 Prm1P02319 51 aa9.77□□□□□ -0.84
Cbx1-201ENSMUST00000018810 Gm4491E0CX42 125 aa9.75□□□□□ -0.85
Cbx1-201ENSMUST00000018810 4930507D05RikQ8C9C9 103 aa9.75□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Gm9821Q8K076 103 aa9.75□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Ush2AQ2QI47 5193 aa9.75□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Rpl37Q9D823 97 aa9.75□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Gm11563B1AQ90 168 aa9.73□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Gm7735D3YX18 52 aa9.73□□□□□ -0.85
Cbx1-201ENSMUST00000018810 Krtap4-7Q9D732 168 aa9.73□□□□□ -0.85
Cbx1-201ENSMUST00000018810 2310079G19RikQ9D6L6 185 aa9.72□□□□□ -0.85
Cbx1-201ENSMUST00000018810 H2al1bA0A087WP11 105 aa9.7□□□□□ -0.86
Cbx1-201ENSMUST00000018810 Gm10337F7DEP7 55 aa9.68□□□□□ -0.86
Cbx1-201ENSMUST00000018810 Ndufb1P0DN34 57 aa9.68□□□□□ -0.86
Cbx1-201ENSMUST00000018810 4932415D10RikA0A1W2P6U8 4986 aa9.65□□□□□ -0.87
Cbx1-201ENSMUST00000018810 Sox16Q62247 57 aa9.63□□□□□ -0.87
Cbx1-201ENSMUST00000018810 Gm9789Q8BIG3 52 aa9.63□□□□□ -0.87
Cbx1-201ENSMUST00000018810 SptssbQ925E8 76 aa9.63□□□□□ -0.87
Cbx1-201ENSMUST00000018810 Uqcr11Q9CPX8 56 aa9.62□□□□□ -0.87
Cbx1-201ENSMUST00000018810 Limd2Q8BGB5 128 aa9.61□□□□□ -0.87
Cbx1-201ENSMUST00000018810 H2al1kJ3QP08 105 aa9.59□□□□□ -0.87
Cbx1-201ENSMUST00000018810 H2al1mQ9DAD9 105 aa9.59□□□□□ -0.87
Cbx1-201ENSMUST00000018810 9230102O04RikA2ASX7 82 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 75.3 ms