RNA–Protein interactions for RNA: ENSMUST00000008088.8

Ttc9b-201, Transcript of Tetratricopeptide repeat protein 9B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ttc9b, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9b-201ENSMUST00000008088 Stard9Q80TF6 4561 aa11.77□□□□□ -0.53
Ttc9b-201ENSMUST00000008088 Gm19935A0A1B0GSF9 52 aa11.72□□□□□ -0.53
Ttc9b-201ENSMUST00000008088 Gm16253D3Z167 63 aa11.72□□□□□ -0.53
Ttc9b-201ENSMUST00000008088 Lrp1bQ9JI18 4599 aa11.7□□□□□ -0.54
Ttc9b-201ENSMUST00000008088 Dync1h1Q9JHU4 4644 aaKnown RBP11.7□□□□□ -0.54
Ttc9b-201ENSMUST00000008088 SnurfQ9WU12 71 aa11.67□□□□□ -0.54
Ttc9b-201ENSMUST00000008088 1700074P13RikQ9D9G7 251 aa11.66□□□□□ -0.54
Ttc9b-201ENSMUST00000008088 Coa6Q8BGD8 79 aa11.64□□□□□ -0.55
Ttc9b-201ENSMUST00000008088 Fat1A0A1L1SQU7 4645 aa11.64□□□□□ -0.55
Ttc9b-201ENSMUST00000008088 Ryr2E9Q401 4966 aaKnown RBP11.62□□□□□ -0.55
Ttc9b-201ENSMUST00000008088 Spint4Q9D263 159 aa11.61□□□□□ -0.55
Ttc9b-201ENSMUST00000008088 Spaca4Q80ZQ0 127 aa11.58□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Igkv3-3A0A140T8Q0 119 aa11.58□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Smlr1J3QMJ4 66 aa11.58□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Atox1O08997 68 aaKnown RBP11.58□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Defb12Q8K4N3 78 aa11.58□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Pkhd1E9PZ36 4059 aa11.57□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Rps28P62858 69 aaKnown RBP11.56□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Pet100P0DJE0 76 aa11.55□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Gm10267M0QWD8 85 aa11.54□□□□□ -0.56
Ttc9b-201ENSMUST00000008088 Brk1Q91VR8 75 aa11.51□□□□□ -0.57
Ttc9b-201ENSMUST00000008088 Dph3Q8K0W9 82 aa11.48□□□□□ -0.57
Ttc9b-201ENSMUST00000008088 Fat2Q5F226 4351 aa11.47□□□□□ -0.57
Ttc9b-201ENSMUST00000008088 Serp1Q9Z1W5 66 aa11.47□□□□□ -0.57
Ttc9b-201ENSMUST00000008088 Mrpl55Q9CZ83 127 aa11.46□□□□□ -0.57
Ttc9b-201ENSMUST00000008088 Cypt15B1AXS0 87 aa11.44□□□□□ -0.58
Ttc9b-201ENSMUST00000008088 Coa5Q99M07 74 aa11.43□□□□□ -0.58
Ttc9b-201ENSMUST00000008088 RetnlbQ99P86 105 aa11.41□□□□□ -0.58
Ttc9b-201ENSMUST00000008088 Chtf8P0CG14 533 aa11.4□□□□□ -0.58
Ttc9b-201ENSMUST00000008088 SacsQ9JLC8 4582 aa11.39□□□□□ -0.59
Ttc9b-201ENSMUST00000008088 Defb13Q8R2I4 64 aa11.34□□□□□ -0.59
Ttc9b-201ENSMUST00000008088 Ryr1E9PZQ0 5035 aa11.3□□□□□ -0.6
Ttc9b-201ENSMUST00000008088 Defb38Q7TNV7 63 aa11.3□□□□□ -0.6
Ttc9b-201ENSMUST00000008088 Cdc42se1Q8BHL7 80 aa11.29□□□□□ -0.6
Ttc9b-201ENSMUST00000008088 A530084C06RikQ3UTW2 186 aa11.26□□□□□ -0.61
Ttc9b-201ENSMUST00000008088 Gm10160F6Y577 67 aa11.25□□□□□ -0.61
Ttc9b-201ENSMUST00000008088 Gm10197F6QEY5 67 aa11.21□□□□□ -0.62
Ttc9b-201ENSMUST00000008088 Kmt2cQ8BRH4 4903 aa11.19□□□□□ -0.62
Ttc9b-201ENSMUST00000008088 SvipQ3UZP4 77 aa11.17□□□□□ -0.62
Ttc9b-201ENSMUST00000008088 Pkhd1l1Q80ZA4 4249 aa11.17□□□□□ -0.62
Ttc9b-201ENSMUST00000008088 H2al1aQ5M8Q2 105 aa11.16□□□□□ -0.62
Ttc9b-201ENSMUST00000008088 Vps13bQ80TY5 3993 aa11.14□□□□□ -0.63
Ttc9b-201ENSMUST00000008088 Gm21798J3QNU5 87 aa11.08□□□□□ -0.63
Ttc9b-201ENSMUST00000008088 Rps29P62274 56 aa11.07□□□□□ -0.64
Ttc9b-201ENSMUST00000008088 Dnah8Q91XQ0 4731 aa11.06□□□□□ -0.64
Ttc9b-201ENSMUST00000008088 Lrp1Q91ZX7 4545 aaKnown RBP11.06□□□□□ -0.64
Ttc9b-201ENSMUST00000008088 Krtap19-5O08632 62 aa11.03□□□□□ -0.64
Ttc9b-201ENSMUST00000008088 Phxr4P15974 95 aa10.99□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Gm26620Q9CY65 116 aa10.99□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Gm10999F6Q4M4 69 aa10.98□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Krtap3-2Q9D638 99 aa10.97□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Krtap3-3Q9D7P0 99 aa10.97□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Gm11939A2A592 99 aa10.96□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Fat3Q8BNA6 4555 aa10.96□□□□□ -0.65
Ttc9b-201ENSMUST00000008088 Gm10643Q3URG9 111 aa10.95□□□□□ -0.66
Ttc9b-201ENSMUST00000008088 Gm20661K7N787 53 aa10.92□□□□□ -0.66
Ttc9b-201ENSMUST00000008088 Q8BGJ3 129 aa10.91□□□□□ -0.66
Ttc9b-201ENSMUST00000008088 Abca13Q5SSE9 5034 aa10.87□□□□□ -0.67
Ttc9b-201ENSMUST00000008088 H2al1eQ810S6 105 aa10.87□□□□□ -0.67
Ttc9b-201ENSMUST00000008088 2310034C09RikQ9D746 214 aa10.85□□□□□ -0.67
Ttc9b-201ENSMUST00000008088 Gm9736A0A1W2P7N1 277 aa10.84□□□□□ -0.67
Ttc9b-201ENSMUST00000008088 Herc2Q4U2R1 4836 aa10.83□□□□□ -0.68
Ttc9b-201ENSMUST00000008088 A930033H14RikG5E8X6 103 aa10.8□□□□□ -0.68
Ttc9b-201ENSMUST00000008088 Gm10337F7DEP7 55 aa10.79□□□□□ -0.68
Ttc9b-201ENSMUST00000008088 2310079G19RikQ9D6L6 185 aa10.79□□□□□ -0.68
Ttc9b-201ENSMUST00000008088 Gm4491E0CX42 125 aa10.78□□□□□ -0.68
Ttc9b-201ENSMUST00000008088 H2al1bA0A087WP11 105 aa10.77□□□□□ -0.69
Ttc9b-201ENSMUST00000008088 Birc6O88738 4882 aa10.75□□□□□ -0.69
Ttc9b-201ENSMUST00000008088 Gm5767A0A0J9YTU8 78 aa10.73□□□□□ -0.69
Ttc9b-201ENSMUST00000008088 Kiaa1109A2AAE1 5005 aa10.73□□□□□ -0.69
Ttc9b-201ENSMUST00000008088 D6Ertd527eA0A0N4SWI3 464 aa10.71□□□□□ -0.69
Ttc9b-201ENSMUST00000008088 Mycbp2Q7TPH6 4711 aa10.71□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 H2al1kJ3QP08 105 aa10.7□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 H2al1mQ9DAD9 105 aa10.7□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 Defb1P56386 69 aa10.69□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 Dnhd1D3Z2X2 4750 aa10.69□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 4930507D05RikQ8C9C9 103 aa10.66□□□□□ -0.7
Ttc9b-201ENSMUST00000008088 Gm5965D3Z724 196 aa10.62□□□□□ -0.71
Ttc9b-201ENSMUST00000008088 Ndufb1P0DN34 57 aa10.61□□□□□ -0.71
Ttc9b-201ENSMUST00000008088 SptssbQ925E8 76 aa10.6□□□□□ -0.71
Ttc9b-201ENSMUST00000008088 4933415A04RikQ9D443 101 aa10.6□□□□□ -0.71
Ttc9b-201ENSMUST00000008088 Uqcr11Q9CPX8 56 aa10.57□□□□□ -0.72
Ttc9b-201ENSMUST00000008088 HydinQ80W93 5154 aa10.57□□□□□ -0.72
Ttc9b-201ENSMUST00000008088 Sox16Q62247 57 aa10.55□□□□□ -0.72
Ttc9b-201ENSMUST00000008088 Limd2Q8BGB5 128 aa10.54□□□□□ -0.72
Ttc9b-201ENSMUST00000008088 Krtap15-1Q9QZU5 150 aa10.49□□□□□ -0.73
Ttc9b-201ENSMUST00000008088 Rpl37Q9D823 97 aa10.42□□□□□ -0.74
Ttc9b-201ENSMUST00000008088 Rnase13Q5GAM7 153 aa10.37□□□□□ -0.75
Ttc9b-201ENSMUST00000008088 PcloQ9QYX7 5068 aa10.33□□□□□ -0.76
Ttc9b-201ENSMUST00000008088 9230102O04RikA2ASX7 82 aa10.32□□□□□ -0.76
Ttc9b-201ENSMUST00000008088 Lrp2A2ARV4 4660 aa10.29□□□□□ -0.76
Ttc9b-201ENSMUST00000008088 Cox6b2Q80ZN9 88 aa10.27□□□□□ -0.77
Ttc9b-201ENSMUST00000008088 Gm9821Q8K076 103 aa10.24□□□□□ -0.77
Ttc9b-201ENSMUST00000008088 Gm3646F6S692 53 aa10.19□□□□□ -0.78
Ttc9b-201ENSMUST00000008088 Gm17416Q30KP4 66 aa10.11□□□□□ -0.79
Ttc9b-201ENSMUST00000008088 Lce1mQ9CR91 182 aa10.11□□□□□ -0.79
Ttc9b-201ENSMUST00000008088 Sec61gP60060 68 aa10.08□□□□□ -0.8
Ttc9b-201ENSMUST00000008088 Herc1E9PZP8 4859 aa10.03□□□□□ -0.8
Ttc9b-201ENSMUST00000008088 Ndufs5Q99LY9 106 aa10.03□□□□□ -0.8
Ttc9b-201ENSMUST00000008088 Gm10382Q3V0T5 144 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms