RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 H2al1aQ5M8Q2 105 aa4.55□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 AI606181Q8C7B9 129 aa4.55□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 Gm10139O88245 57 aa4.54□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 Ryr1E9PZQ0 5035 aa4.54□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 Gm12353A2AGJ4 60 aa4.53□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 Rps28P62858 69 aaKnown RBP4.53□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 1700074P13RikQ9D9G7 251 aa4.53□□□□□ -1.68
Crnkl1-201ENSMUST00000001818 Znf706Q9D115 76 aaKnown RBP4.52□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Gm19935A0A1B0GSF9 52 aa4.51□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Pet100P0DJE0 76 aa4.5□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Tnp2P11378 117 aa4.5□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 A0A286YE49 62 aa4.49□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 A530084C06RikQ3UTW2 186 aa4.49□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 H2al1bA0A087WP11 105 aa4.48□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 H2al1kJ3QP08 105 aa4.48□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 H2al1eQ810S6 105 aa4.48□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 H2al1mQ9DAD9 105 aa4.48□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Defb13Q8R2I4 64 aa4.47□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Dync1h1Q9JHU4 4644 aaKnown RBP4.46□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Igkv3-3A0A140T8Q0 119 aa4.46□□□□□ -1.69
Crnkl1-201ENSMUST00000001818 Chchd10Q7TNL9 138 aa4.46□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Dnah2P0C6F1 4456 aa4.46□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Ryr2E9Q401 4966 aaKnown RBP4.45□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Ndufc1Q9CQY9 76 aa4.45□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Fat1A0A1L1SQU7 4645 aa4.45□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Lrp1bQ9JI18 4599 aa4.45□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 ApobE9Q414 4505 aa4.44□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Serp1Q9Z1W5 66 aa4.43□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Coa6Q8BGD8 79 aa4.41□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Cypt14J3QPF7 87 aa4.4□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Pkd1O08852 4293 aa4.4□□□□□ -1.7
Crnkl1-201ENSMUST00000001818 Atox1O08997 68 aaKnown RBP4.39□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Hectd4E9Q2E4 4418 aa4.38□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Chtf8P0CG14 533 aa4.37□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Gm10197F6QEY5 67 aa4.37□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Spint4Q9D263 159 aa4.37□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Lrp1Q91ZX7 4545 aaKnown RBP4.37□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Sox16Q62247 57 aa4.36□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 SacsQ9JLC8 4582 aa4.36□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Cypt15B1AXS0 87 aa4.36□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Gm37013Q8K491 104 aa4.36□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Krtap19-5O08632 62 aa4.34□□□□□ -1.71
Crnkl1-201ENSMUST00000001818 Gm10160F6Y577 67 aa4.34□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Coa5Q99M07 74 aa4.33□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Gm16253D3Z167 63 aa4.33□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Gm10999F6Q4M4 69 aa4.32□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Defb1P56386 69 aa4.32□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Herc2Q4U2R1 4836 aa4.31□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Kiaa1109A2AAE1 5005 aa4.31□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Gm2310J3QNJ2 377 aa4.3□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Gm9736A0A1W2P7N1 277 aa4.28□□□□□ -1.72
Crnkl1-201ENSMUST00000001818 Q8BGJ3 129 aa4.27□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Gm21798J3QNU5 87 aa4.26□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Fat3Q8BNA6 4555 aa4.25□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Abca13Q5SSE9 5034 aa4.25□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Kmt2cQ8BRH4 4903 aa4.25□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 1700042G07RikB1AUF7 90 aa4.24□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 HydinQ80W93 5154 aa4.23□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Dnah8Q91XQ0 4731 aa4.23□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Cdc42se1Q8BHL7 80 aa4.23□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Pkhd1E9PZ36 4059 aa4.22□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 SptssbQ925E8 76 aa4.22□□□□□ -1.73
Crnkl1-201ENSMUST00000001818 Mycbp2Q7TPH6 4711 aa4.21□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Vps13bQ80TY5 3993 aa4.2□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 D6Ertd527eA0A0N4SWI3 464 aa4.2□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Gm20661K7N787 53 aa4.2□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Fat2Q5F226 4351 aa4.2□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Gm5965D3Z724 196 aa4.19□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Gm26620Q9CY65 116 aa4.17□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 2310034C09RikQ9D746 214 aa4.17□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Pkhd1l1Q80ZA4 4249 aa4.17□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 Ndufs5Q99LY9 106 aa4.15□□□□□ -1.74
Crnkl1-201ENSMUST00000001818 PcloQ9QYX7 5068 aa4.15□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Lrp2A2ARV4 4660 aa4.15□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 4933415A04RikQ9D443 101 aa4.15□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Krtap15-1Q9QZU5 150 aa4.14□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Prm2P07978 107 aa4.13□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Birc6O88738 4882 aa4.13□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Rps29P62274 56 aa4.12□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Phxr4P15974 95 aa4.12□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Gm5767A0A0J9YTU8 78 aa4.12□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Gm4491E0CX42 125 aa4.12□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Gm9821Q8K076 103 aa4.1□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Dnhd1D3Z2X2 4750 aa4.1□□□□□ -1.75
Crnkl1-201ENSMUST00000001818 Gm3646F6S692 53 aa4.07□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 Gm11939A2A592 99 aa4.05□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 Lce1mQ9CR91 182 aa4.04□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 4930507D05RikQ8C9C9 103 aa4.03□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 Herc1E9PZP8 4859 aa4.03□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 A930033H14RikG5E8X6 103 aa4.03□□□□□ -1.76
Crnkl1-201ENSMUST00000001818 Gm21887J3QQ04 176 aa4.02□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Rnase13Q5GAM7 153 aa4.02□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Gm12216A0A1W2P827 62 aa4.01□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 2310057N15RikQ9D6T8 200 aa4.01□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Gm18596A0A1W2P860 280 aa4.01□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Ndufb1P0DN34 57 aa3.99□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Krtap3-2Q9D638 99 aa3.99□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Krtap3-3Q9D7P0 99 aa3.99□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Gm10318A0A1W2P728 225 aa3.97□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Gm10643Q3URG9 111 aa3.97□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms