RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Gm42715A0A087WP63 3095 aaKnown RBP10.33□□□□□ -0.76
Ptpre-207ENSMUST00000211140 FlnbQ80X90 2602 aaKnown RBP10.32□□□□□ -0.76
Ptpre-207ENSMUST00000211140 Dnah12Q3V0Q1 3086 aa10.32□□□□□ -0.76
Ptpre-207ENSMUST00000211140 Camk2n1Q6QWF9 78 aa10.28□□□□□ -0.76
Ptpre-207ENSMUST00000211140 Prrc2cQ3TLH4 2846 aaKnown RBP10.26□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Gm17349F7BGH6 99 aa10.26□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Notch1Q01705 2531 aa10.24□□□□□ -0.77
Ptpre-207ENSMUST00000211140 4933415A04RikQ9D443 101 aa10.22□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Ep400Q8CHI8 3072 aaKnown RBP10.22□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Romo1P60603 79 aa10.22□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Rpl37Q9D823 97 aa10.22□□□□□ -0.77
Ptpre-207ENSMUST00000211140 Gm36176A0A1W2P8D5 158 aa10.2□□□□□ -0.78
Ptpre-207ENSMUST00000211140 1700042G07RikB1AUF7 90 aa10.19□□□□□ -0.78
Ptpre-207ENSMUST00000211140 Krtap29-1A2A5X4 342 aa10.17□□□□□ -0.78
Ptpre-207ENSMUST00000211140 Prune2Q52KR3 3084 aa10.15□□□□□ -0.78
Ptpre-207ENSMUST00000211140 Fam229aB2KGE5 128 aa10.14□□□□□ -0.79
Ptpre-207ENSMUST00000211140 Cep350E9Q309 3095 aa10.1□□□□□ -0.79
Ptpre-207ENSMUST00000211140 Jbts17Q8CE72 3214 aa10.09□□□□□ -0.79
Ptpre-207ENSMUST00000211140 Kmt2bO08550 2713 aa10.08□□□□□ -0.8
Ptpre-207ENSMUST00000211140 Gm10382Q3V0T5 144 aa10.08□□□□□ -0.8
Ptpre-207ENSMUST00000211140 Gm5767A0A0J9YTU8 78 aa10.07□□□□□ -0.8
Ptpre-207ENSMUST00000211140 SmcpP15265 143 aa10.06□□□□□ -0.8
Ptpre-207ENSMUST00000211140 Stab1Q8R4Y4 2571 aa10.05□□□□□ -0.8
Ptpre-207ENSMUST00000211140 2310050C09RikG5E8Z3 280 aa10.04□□□□□ -0.8
Ptpre-207ENSMUST00000211140 Hectd1Q69ZR2 2618 aaKnown RBP10.04□□□□□ -0.8
Ptpre-207ENSMUST00000211140 Sec61bQ9CQS8 96 aaKnown RBP10.01□□□□□ -0.81
Ptpre-207ENSMUST00000211140 Krtap13O88375 197 aa10□□□□□ -0.81
Ptpre-207ENSMUST00000211140 Gm2310J3QNJ2 377 aa9.99□□□□□ -0.81
Ptpre-207ENSMUST00000211140 BC029722A0A0N4SW31 51 aa9.99□□□□□ -0.81
Ptpre-207ENSMUST00000211140 Akap13E9Q394 2776 aa9.98□□□□□ -0.81
Ptpre-207ENSMUST00000211140 NipblQ6KCD5 2798 aaKnown RBP9.97□□□□□ -0.81
Ptpre-207ENSMUST00000211140 TrioQ0KL02 3102 aa9.97□□□□□ -0.81
Ptpre-207ENSMUST00000211140 Bod1lE9Q6J5 3032 aa9.96□□□□□ -0.82
Ptpre-207ENSMUST00000211140 UtrnE9Q6R7 3430 aa9.95□□□□□ -0.82
Ptpre-207ENSMUST00000211140 Map1aQ9QYR6 2776 aa9.95□□□□□ -0.82
Ptpre-207ENSMUST00000211140 Gm19426M0QWC7 77 aa9.91□□□□□ -0.82
Ptpre-207ENSMUST00000211140 Gm9507D3Z5T3 223 aa9.85□□□□□ -0.83
Ptpre-207ENSMUST00000211140 Krtap14O08640 167 aa9.84□□□□□ -0.83
Ptpre-207ENSMUST00000211140 Cox6b2Q80ZN9 88 aa9.78□□□□□ -0.84
Ptpre-207ENSMUST00000211140 Mast4Q811L6 2618 aa9.76□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Itpr3P70227 2670 aa9.76□□□□□ -0.85
Ptpre-207ENSMUST00000211140 2310061N02RikQ9D6S9 174 aa9.75□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Tnrc18Q80WC3 2878 aa9.73□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Tep1P97499 2629 aa9.73□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Ash1lQ99MY8 2958 aa9.73□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Lama3Q61789 3330 aa9.72□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Krtap10-4Q08EG8 221 aa9.72□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Itpr1P11881 2749 aa9.72□□□□□ -0.85
Ptpre-207ENSMUST00000211140 Chd6A3KFM7 2711 aa9.7□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Dmxl1Q6PNC0 3013 aa9.69□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Ubr5Q80TP3 2792 aa9.69□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Rps29P62274 56 aa9.69□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Chd7A2AJK6 2986 aaKnown RBP9.69□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Col12a1Q60847 3120 aa9.68□□□□□ -0.86
Ptpre-207ENSMUST00000211140 Tnp2P11378 117 aa9.65□□□□□ -0.86
Ptpre-207ENSMUST00000211140 9530053A07RikE9PVG8 2581 aa9.63□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Igsf10Q3V1M1 2594 aa9.62□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Mki67E9PVX6 3177 aaKnown RBP9.62□□□□□ -0.87
Ptpre-207ENSMUST00000211140 D6Ertd527eA0A0N4SWI3 464 aa9.62□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Stab2Q8R4U0 2559 aa9.62□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Lama2Q60675 3118 aaKnown RBP9.61□□□□□ -0.87
Ptpre-207ENSMUST00000211140 MgaA2AWL7 3003 aaKnown RBP9.6□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Krtap10-10A0A1W2P7T6 217 aa9.59□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Ranbp2Q9ERU9 3053 aaKnown RBP9.59□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Fbn2Q61555 2907 aa9.59□□□□□ -0.87
Ptpre-207ENSMUST00000211140 Ndufaf8A2AMZ4 74 aa9.55□□□□□ -0.88
Ptpre-207ENSMUST00000211140 Nbeal2Q6ZQA0 2742 aa9.53□□□□□ -0.88
Ptpre-207ENSMUST00000211140 Gm7173A0A0G2JEB6 3132 aa9.5□□□□□ -0.89
Ptpre-207ENSMUST00000211140 Rev3lQ61493 3122 aa9.48□□□□□ -0.89
Ptpre-207ENSMUST00000211140 Myo15bI7HPW8 3033 aa9.45□□□□□ -0.9
Ptpre-207ENSMUST00000211140 Pkd1l1Q8R526 2615 aa9.44□□□□□ -0.9
Ptpre-207ENSMUST00000211140 Cfap54Q8C6S9 3106 aa9.44□□□□□ -0.9
Ptpre-207ENSMUST00000211140 Gm21887J3QQ04 176 aa9.41□□□□□ -0.9
Ptpre-207ENSMUST00000211140 KalrnA2CG49 2964 aa9.38□□□□□ -0.91
Ptpre-207ENSMUST00000211140 HttP42859 3119 aa9.35□□□□□ -0.91
Ptpre-207ENSMUST00000211140 Gm2696A0A1W2P709 240 aa9.32□□□□□ -0.92
Ptpre-207ENSMUST00000211140 Col6a5A6H584 2640 aa9.3□□□□□ -0.92
Ptpre-207ENSMUST00000211140 Muc2Q80Z19 2680 aa9.29□□□□□ -0.92
Ptpre-207ENSMUST00000211140 TgO08710 2766 aa9.27□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Usp34Q6ZQ93 3582 aa9.26□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Celsr1O35161 3034 aa9.26□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Frem2Q6NVD0 3160 aa9.24□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Tex15F8VPN2 2785 aa9.24□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Gm9112A2AI92 75 aa9.23□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Hivep1Q03172 2688 aa9.23□□□□□ -0.93
Ptpre-207ENSMUST00000211140 FcgbpE9Q0B5 2583 aa9.22□□□□□ -0.93
Ptpre-207ENSMUST00000211140 Gm5965D3Z724 196 aa9.2□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Itpr2Q9Z329 2701 aa9.19□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Cdh23Q99PF4 3354 aa9.19□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Gm40193A0A1B0GT39 78 aa9.19□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Vps13aQ5H8C4 3166 aa9.18□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Tnp1P10856 55 aa9.18□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Gm20537G3UYK7 97 aa9.17□□□□□ -0.94
Ptpre-207ENSMUST00000211140 Srrm2Q8BTI8 2703 aaKnown RBP9.16□□□□□ -0.94
Ptpre-207ENSMUST00000211140 ApcQ61315 2845 aa9.14□□□□□ -0.95
Ptpre-207ENSMUST00000211140 BptfA2A654 3036 aaKnown RBP9.13□□□□□ -0.95
Ptpre-207ENSMUST00000211140 Unc80Q8BLN6 3261 aa9.11□□□□□ -0.95
Ptpre-207ENSMUST00000211140 2310057N15RikQ9D6T8 200 aa9.09□□□□□ -0.95
Ptpre-207ENSMUST00000211140 Utp20Q5XG71 2788 aaKnown RBP9.08□□□□□ -0.96
Ptpre-207ENSMUST00000211140 AspmQ8CJ27 3122 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 93.6 ms