RNA–Protein interactions for RNA: ENSMUST00000173740.1

Lgr5-208, Transcript of Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

TSL 5 BASIC

Gene Lgr5, Length 2,508 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5-208ENSMUST00000173740 Gm16485Q8C4B7 115 aa7.58□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Tcl1b3P56842 122 aa7.57□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Gm5617Q91VN2 117 aa7.56□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Dnah9B1AR51 4484 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Igkv8-26A0A075B5N5 123 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Ighv2-9A0A075B5Q5 116 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Igkv8-24A0A140T8P5 121 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Gm10643Q3URG9 111 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Dnah7aE9Q0T8 4024 aa7.55□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Ube2bP63147 152 aa7.54□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Trav13-2A0A075B649 110 aa7.53□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Atox1O08997 68 aaKnown RBP7.53□□□□□ -1.2
Lgr5-208ENSMUST00000173740 TgO08710 2766 aa7.53□□□□□ -1.2
Lgr5-208ENSMUST00000173740 Wfdc12Q9JHY3 85 aa7.53□□□□□ -1.2
Lgr5-208ENSMUST00000173740 A730009L09RikA0A1B0GS82 72 aa7.52□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Igkv8-18A0A0B4J1J3 123 aa7.51□□□□□ -1.21
Lgr5-208ENSMUST00000173740 A0A286YCN5 57 aa7.5□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Coa6Q8BGD8 79 aa7.5□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Sprr4Q8CGN8 76 aa7.5□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Ighv2-2A0A075B5P8 116 aa7.49□□□□□ -1.21
Lgr5-208ENSMUST00000173740 P01821 116 aa7.49□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Gm17509Q9CZ61 145 aa7.49□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Igkv8-16A0A0G2JDG9 121 aa7.48□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Igkv3-3A0A140T8Q0 119 aa7.48□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Klk12B2RVZ0 247 aa7.48□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Cox7b2Q9D2H1 82 aa7.48□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Igkv4-92A0A0B4J1I2 117 aa7.48□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Gm10518F6UQQ9 182 aa7.47□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Defb12Q8K4N3 78 aa7.47□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Gm10320E9PW43 113 aa7.46□□□□□ -1.21
Lgr5-208ENSMUST00000173740 Tcl1b5P56845 121 aa7.46□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Coa5Q99M07 74 aa7.46□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Dnah7cA0A087WR13 4024 aa7.45□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Ube2aQ9Z255 152 aa7.45□□□□□ -1.22
Lgr5-208ENSMUST00000173740 A730071L15RikQ8C4X0 137 aa7.45□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Cox7bP56393 80 aa7.44□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Phf5aP83870 110 aaKnown RBP7.44□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Camk2n2Q78WH7 79 aa7.44□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Sprr1aQ62266 144 aa7.44□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Gm3646F6S692 53 aa7.43□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Pde6gP09174 87 aa7.43□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Prr15lQ8JZM2 100 aa7.43□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Reg3dQ9QUS9 175 aa7.43□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Igkv3-12A0A140T8P0 119 aa7.42□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Phxr4P15974 95 aa7.42□□□□□ -1.22
Lgr5-208ENSMUST00000173740 AY074887Q8R5F9 132 aa7.42□□□□□ -1.22
Lgr5-208ENSMUST00000173740 2310050C09RikG5E8Z3 280 aa7.41□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Igkv4-58A0A0G2JGI6 119 aa7.4□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Gm17577J3QNF7 156 aa7.4□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Defb40Q70KL2 73 aa7.4□□□□□ -1.22
Lgr5-208ENSMUST00000173740 Gm10770F7D043 238 aa7.4□□□□□ -1.23
Lgr5-208ENSMUST00000173740 9530003J23RikQ8BM26 151 aa7.4□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Gm9805F6YK59 57 aa7.38□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Dnah5Q8VHE6 4621 aa7.37□□□□□ -1.23
Lgr5-208ENSMUST00000173740 U90926O08546 118 aa7.36□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Smim29Q8R043 75 aa7.36□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Ly6g6cQ9Z1Q4 126 aa7.36□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Fam168bQ80XQ8 194 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Plac8Q9JI48 112 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Igkv8-28A0A0G2JE47 121 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Igkv1-88A0A140T8N1 120 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Sfta2E9PXB6 77 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Nupr2Q497P3 102 aa7.35□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Gm11627A6PWP4 55 aa7.34□□□□□ -1.23
Lgr5-208ENSMUST00000173740 A330070K13RikQ8CA53 115 aa7.34□□□□□ -1.23
Lgr5-208ENSMUST00000173740 Igkv8-19A0A0G2JFN8 121 aa7.33□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Gm9821Q8K076 103 aa7.33□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Msrb1Q9JLC3 116 aa7.33□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Igkv3-7A0A0G2JE31 119 aa7.32□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Vps13dB1ART2 4390 aa7.32□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Igkv3-2A0A075B5P0 119 aa7.3□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Krtap10-4Q08EG8 221 aa7.3□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Wfdc6bF6ULY1 148 aa7.3□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Elof1P60003 83 aa7.28□□□□□ -1.24
Lgr5-208ENSMUST00000173740 P84750 121 aa7.28□□□□□ -1.24
Lgr5-208ENSMUST00000173740 SptssbQ925E8 76 aa7.28□□□□□ -1.24
Lgr5-208ENSMUST00000173740 Cdk2ap2Q9CPY4 127 aa7.27□□□□□ -1.25
Lgr5-208ENSMUST00000173740 PscaP57096 123 aa7.26□□□□□ -1.25
Lgr5-208ENSMUST00000173740 HrnrQ8VHD8 2496 aa7.26□□□□□ -1.25
Lgr5-208ENSMUST00000173740 SycnQ8VCK7 134 aa7.26□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Obox2E9PXV9 151 aa7.25□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Prol1E9PYQ4 312 aa7.25□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Gm17521F6QAC8 156 aa7.25□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Dnah2P0C6F1 4456 aa7.25□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Sprr2jO70561 109 aa7.25□□□□□ -1.25
Lgr5-208ENSMUST00000173740 2310034C09RikQ9D746 214 aa7.24□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Gm7276Q3TYW4 209 aa7.24□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Dmac1Q9CQ00 111 aa7.23□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Zcchc13Q9D548 170 aa7.23□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Stard9Q80TF6 4561 aa7.22□□□□□ -1.25
Lgr5-208ENSMUST00000173740 Defb37Q7TMD2 62 aa7.21□□□□□ -1.26
Lgr5-208ENSMUST00000173740 1700012A03RikQ9DAF1 130 aa7.21□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Ryr3A2AGL3 4863 aa7.2□□□□□ -1.26
Lgr5-208ENSMUST00000173740 C130032M10RikQ8C888 123 aa7.2□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Pkd1O08852 4293 aa7.19□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Gm10065F6TJM2 114 aa7.17□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Gm12216A0A1W2P827 62 aa7.17□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Defb9Q8R2I6 67 aa7.16□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Krtap29-1A2A5X4 342 aa7.15□□□□□ -1.26
Lgr5-208ENSMUST00000173740 Igkv1-122A0A140T8M9 119 aa7.14□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms