RNA–Protein interactions for RNA: ENSMUST00000109950.4

Sin3b-202, Transcript of Paired amphipathic helix protein Sin3b, mousemouse

TSL 1 (best) BASIC

Gene Sin3b, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3b-202ENSMUST00000109950 Gm19402J3QJV4 266 aa12,21□□□□□ -0,45
Sin3b-202ENSMUST00000109950 Dph3Q8K0W9 82 aa12,21□□□□□ -0,45
Sin3b-202ENSMUST00000109950 Xlr5cQ9JJR2 179 aa12,21□□□□□ -0,45
Sin3b-202ENSMUST00000109950 Scgb1b10A0A087WPW0 93 aa12,2□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Plscr4P58196 326 aa12,2□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Hint1P70349 126 aaKnown RBP12,2□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Trappc1Q5NCF2 145 aa12,19□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Trav13n-2A0A0G2JF93 110 aa12,18□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Tmem243B2RVB9 118 aa12,18□□□□□ -0,46
Sin3b-202ENSMUST00000109950 5930422O12RikQ8C4Y4 123 aa12,18□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Vpreb3D3Z6J4 130 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Gm10320E9PW43 113 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Lamtor3O88653 124 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Smim1P0C8K7 78 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Crct1Q6PAI5 102 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Defb37Q7TMD2 62 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Gm5868Q8BJG1 145 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 Gm5142Q8C5X9 133 aa12,16□□□□□ -0,46
Sin3b-202ENSMUST00000109950 2310057N15RikQ9D6T8 200 aa12,15□□□□□ -0,46
Sin3b-202ENSMUST00000109950 LorP18165 486 aa12,13□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Defb45Q3V490 66 aa12,13□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Defb29Q8BGW9 78 aa12,13□□□□□ -0,47
Sin3b-202ENSMUST00000109950 H2al1nQ497L1 109 aa12,12□□□□□ -0,47
Sin3b-202ENSMUST00000109950 SelenowP63300 88 aa12,11□□□□□ -0,47
Sin3b-202ENSMUST00000109950 BC107364E9Q5A2 140 aa12,1□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Gm2310J3QNJ2 377 aa12,1□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Eif4ebp3Q80VV3 101 aa12,1□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Dnal4Q9DCM4 105 aa12,1□□□□□ -0,47
Sin3b-202ENSMUST00000109950 A0A286YE02 88 aa12,09□□□□□ -0,47
Sin3b-202ENSMUST00000109950 P0C913 63 aa12,09□□□□□ -0,47
Sin3b-202ENSMUST00000109950 Ighv10-1A0A0B4J1J6 119 aa12,07□□□□□ -0,48
Sin3b-202ENSMUST00000109950 S100a1P56565 94 aa12,07□□□□□ -0,48
Sin3b-202ENSMUST00000109950 A830005F24RikQ8BRT5 167 aa12,07□□□□□ -0,48
Sin3b-202ENSMUST00000109950 Gm9821Q8K076 103 aa12,05□□□□□ -0,48
Sin3b-202ENSMUST00000109950 Gm21886J3QJU9 214 aa12,02□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Smim26Q3V460 107 aa12,02□□□□□ -0,49
Sin3b-202ENSMUST00000109950 IqcjQ8BPW0 110 aa12,01□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Vamp8O70404 101 aa12□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Vmn1r197Q8R265 298 aa11,98□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Igkv3-4A0A140T8Q4 119 aa11,97□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Rnf213E9Q555 5152 aaKnown RBP11,96□□□□□ -0,49
Sin3b-202ENSMUST00000109950 Gm10401E9Q3K6 71 aa11,95□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Uqcc3Q8K2T4 89 aa11,95□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Pam16Q9CQV1 125 aa11,95□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Krtap4-2B1AQ85 167 aa11,93□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Q8BT88 171 aa11,93□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Gm10061D3Z714 54 aa11,92□□□□□ -0,5
Sin3b-202ENSMUST00000109950 A730071L15RikQ8C4X0 137 aa11,92□□□□□ -0,5
Sin3b-202ENSMUST00000109950 4930535I16RikQ9CUI2 172 aa11,92□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Sec61bQ9CQS8 96 aaKnown RBP11,91□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Cited4Q9WUL8 182 aa11,91□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Gm37389A0A0A6YW05 95 aa11,9□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Gm11939A2A592 99 aa11,9□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Gm16253D3Z167 63 aa11,9□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Rpl39lQ9CQD0 51 aa11,9□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Rab37Q9JKM7 223 aa11,9□□□□□ -0,5
Sin3b-202ENSMUST00000109950 Gemin7Q9CWY4 129 aa11,89□□□□□ -0,51
Sin3b-202ENSMUST00000109950 Tal2Q62282 108 aa11,88□□□□□ -0,51
Sin3b-202ENSMUST00000109950 Trav3-4A0A075B654 114 aa11,86□□□□□ -0,51
Sin3b-202ENSMUST00000109950 Krtap15-1Q9QZU5 150 aa11,84□□□□□ -0,51
Sin3b-202ENSMUST00000109950 Gm11569B1AQB1 180 aa11,83□□□□□ -0,52
Sin3b-202ENSMUST00000109950 Igkv8-21A0A140T8P7 120 aa11,82□□□□□ -0,52
Sin3b-202ENSMUST00000109950 P06320 134 aa11,82□□□□□ -0,52
Sin3b-202ENSMUST00000109950 Gm16381A0A1Y7VKT9 73 aa11,81□□□□□ -0,52
Sin3b-202ENSMUST00000109950 Chchd10Q7TNL9 138 aa11,8□□□□□ -0,52
Sin3b-202ENSMUST00000109950 Igkv1-35A0A0G2JDE5 120 aa11,79□□□□□ -0,52
Sin3b-202ENSMUST00000109950 1700018G05RikA0A1B0GSI2 66 aa11,78□□□□□ -0,52
Sin3b-202ENSMUST00000109950 CckP09240 115 aa11,78□□□□□ -0,52
Sin3b-202ENSMUST00000109950 Igkv2-109A0A075B5K6 120 aa11,73□□□□□ -0,53
Sin3b-202ENSMUST00000109950 Sigmar1O55242 223 aa11,72□□□□□ -0,53
Sin3b-202ENSMUST00000109950 Igkv8-28A0A0G2JE47 121 aa11,71□□□□□ -0,53
Sin3b-202ENSMUST00000109950 Ctxnd2A0A1B0GQX3 59 aa11,7□□□□□ -0,54
Sin3b-202ENSMUST00000109950 Grcc10O35127 126 aa11,7□□□□□ -0,54
Sin3b-202ENSMUST00000109950 Cox6a2P43023 97 aa11,67□□□□□ -0,54
Sin3b-202ENSMUST00000109950 G0s2Q61585 103 aa11,67□□□□□ -0,54
Sin3b-202ENSMUST00000109950 Tma7Q8K003 64 aaKnown RBP11,66□□□□□ -0,54
Sin3b-202ENSMUST00000109950 Lce1gQ9D195 139 aa11,66□□□□□ -0,54
Sin3b-202ENSMUST00000109950 Gm10318A0A1W2P728 225 aa11,64□□□□□ -0,55
Sin3b-202ENSMUST00000109950 9530003J23RikQ8BM26 151 aa11,64□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Tac4Q99N14 128 aa11,63□□□□□ -0,55
Sin3b-202ENSMUST00000109950 2310034C09RikQ9D746 214 aa11,63□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Ifitm6A0A1B0GS75 124 aa11,62□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Sfta2E9PXB6 77 aa11,62□□□□□ -0,55
Sin3b-202ENSMUST00000109950 1700020N15RikL7MTX3 112 aa11,61□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Rpl37Q9D823 97 aa11,6□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Defb47Q30KN1 79 aa11,59□□□□□ -0,55
Sin3b-202ENSMUST00000109950 Krtap19-3Q925H6 87 aa11,58□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Gm26620Q9CY65 116 aa11,58□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Gm12353A2AGJ4 60 aa11,56□□□□□ -0,56
Sin3b-202ENSMUST00000109950 P01843 105 aa11,56□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Gm29423A0A087WRM1 55 aa11,55□□□□□ -0,56
Sin3b-202ENSMUST00000109950 4930524J08RikQ9CUJ5 163 aa11,55□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Syne2Q6ZWQ0 6874 aaKnown RBP11,54□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Krtap16-3Q8C1I6 86 aa11,54□□□□□ -0,56
Sin3b-202ENSMUST00000109950 Vps25Q9CQ80 176 aa11,53□□□□□ -0,56
Sin3b-202ENSMUST00000109950 1700042G07RikB1AUF7 90 aa11,52□□□□□ -0,57
Sin3b-202ENSMUST00000109950 Cypt15B1AXS0 87 aa11,52□□□□□ -0,57
Sin3b-202ENSMUST00000109950 CenpwQ3URR0 86 aa11,52□□□□□ -0,57
Sin3b-202ENSMUST00000109950 Krtap19-1Q925H2 87 aa11,52□□□□□ -0,57
Sin3b-202ENSMUST00000109950 Ighv10-3A0A075B5T6 119 aa11,47□□□□□ -0,57
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms