RNA–Protein interactions for RNA: ENSMUST00000109927.1

Syne3-203, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Syne3, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-203ENSMUST00000109927 NbdyA0A0N4SUI7 68 aa7.98□□□□□ -1.13
Syne3-203ENSMUST00000109927 Rps28P62858 69 aaKnown RBP7.97□□□□□ -1.13
Syne3-203ENSMUST00000109927 Gm26620Q9CY65 116 aa7.97□□□□□ -1.13
Syne3-203ENSMUST00000109927 Gm20661K7N787 53 aa7.97□□□□□ -1.13
Syne3-203ENSMUST00000109927 Defb1P56386 69 aa7.96□□□□□ -1.13
Syne3-203ENSMUST00000109927 Map1aQ9QYR6 2776 aa7.96□□□□□ -1.13
Syne3-203ENSMUST00000109927 Gm12216A0A1W2P827 62 aa7.95□□□□□ -1.14
Syne3-203ENSMUST00000109927 Cypt14J3QPF7 87 aa7.93□□□□□ -1.14
Syne3-203ENSMUST00000109927 Coa5Q99M07 74 aa7.93□□□□□ -1.14
Syne3-203ENSMUST00000109927 Anapc11Q9CPX9 84 aa7.91□□□□□ -1.14
Syne3-203ENSMUST00000109927 Nbeal2Q6ZQA0 2742 aa7.89□□□□□ -1.15
Syne3-203ENSMUST00000109927 Hivep1Q03172 2688 aa7.88□□□□□ -1.15
Syne3-203ENSMUST00000109927 Cdc42se1Q8BHL7 80 aa7.88□□□□□ -1.15
Syne3-203ENSMUST00000109927 Prr13Q9CQJ5 137 aa7.88□□□□□ -1.15
Syne3-203ENSMUST00000109927 Gm9821Q8K076 103 aa7.87□□□□□ -1.15
Syne3-203ENSMUST00000109927 Pkd1l1Q8R526 2615 aa7.86□□□□□ -1.15
Syne3-203ENSMUST00000109927 Rnase13Q5GAM7 153 aa7.86□□□□□ -1.15
Syne3-203ENSMUST00000109927 Ash1lQ99MY8 2958 aa7.84□□□□□ -1.15
Syne3-203ENSMUST00000109927 Prrc2cQ3TLH4 2846 aaKnown RBP7.84□□□□□ -1.16
Syne3-203ENSMUST00000109927 Bod1lE9Q6J5 3032 aa7.83□□□□□ -1.16
Syne3-203ENSMUST00000109927 Cdh23Q99PF4 3354 aa7.83□□□□□ -1.16
Syne3-203ENSMUST00000109927 Itpr2Q9Z329 2701 aa7.82□□□□□ -1.16
Syne3-203ENSMUST00000109927 Tenm4Q3UHK6 2771 aa7.82□□□□□ -1.16
Syne3-203ENSMUST00000109927 FryE9Q8I9 3020 aa7.81□□□□□ -1.16
Syne3-203ENSMUST00000109927 Igfn1Q3KNY0 2849 aa7.8□□□□□ -1.16
Syne3-203ENSMUST00000109927 Smim29Q8R043 75 aa7.79□□□□□ -1.16
Syne3-203ENSMUST00000109927 Phxr4P15974 95 aa7.79□□□□□ -1.16
Syne3-203ENSMUST00000109927 Gm9508A0A1W2P7W0 230 aa7.78□□□□□ -1.16
Syne3-203ENSMUST00000109927 Sprr1aQ62266 144 aa7.77□□□□□ -1.17
Syne3-203ENSMUST00000109927 Uqcr11Q9CPX8 56 aa7.77□□□□□ -1.17
Syne3-203ENSMUST00000109927 Stab2Q8R4U0 2559 aa7.77□□□□□ -1.17
Syne3-203ENSMUST00000109927 Odf3bQ5M8M2 238 aa7.75□□□□□ -1.17
Syne3-203ENSMUST00000109927 Szt2A2A9C3 3431 aa7.75□□□□□ -1.17
Syne3-203ENSMUST00000109927 AtmQ62388 3066 aa7.73□□□□□ -1.17
Syne3-203ENSMUST00000109927 Chtf8P0CG14 533 aa7.73□□□□□ -1.17
Syne3-203ENSMUST00000109927 Gm10643Q3URG9 111 aa7.72□□□□□ -1.17
Syne3-203ENSMUST00000109927 HrnrQ8VHD8 2496 aa7.71□□□□□ -1.17
Syne3-203ENSMUST00000109927 2310050C09RikG5E8Z3 280 aa7.71□□□□□ -1.17
Syne3-203ENSMUST00000109927 Gm10139O88245 57 aa7.71□□□□□ -1.18
Syne3-203ENSMUST00000109927 Fam229bQ8CF36 80 aa7.71□□□□□ -1.18
Syne3-203ENSMUST00000109927 Gm9507D3Z5T3 223 aa7.7□□□□□ -1.18
Syne3-203ENSMUST00000109927 AspmQ8CJ27 3122 aa7.7□□□□□ -1.18
Syne3-203ENSMUST00000109927 Gm20538F6Z9R1 75 aa7.7□□□□□ -1.18
Syne3-203ENSMUST00000109927 6030445D17RikE9Q8F9 148 aa7.69□□□□□ -1.18
Syne3-203ENSMUST00000109927 NbeaQ9EPN1 2936 aa7.68□□□□□ -1.18
Syne3-203ENSMUST00000109927 Gm10320E9PW43 113 aa7.67□□□□□ -1.18
Syne3-203ENSMUST00000109927 2310034C09RikQ9D746 214 aa7.66□□□□□ -1.18
Syne3-203ENSMUST00000109927 Mp68P56379 58 aa7.65□□□□□ -1.18
Syne3-203ENSMUST00000109927 Lrrc37aB1AWG4 3215 aa7.65□□□□□ -1.18
Syne3-203ENSMUST00000109927 Cfap54Q8C6S9 3106 aa7.64□□□□□ -1.19
Syne3-203ENSMUST00000109927 Utp20Q5XG71 2788 aaKnown RBP7.63□□□□□ -1.19
Syne3-203ENSMUST00000109927 Krtap13O88375 197 aa7.63□□□□□ -1.19
Syne3-203ENSMUST00000109927 FcgbpE9Q0B5 2583 aa7.63□□□□□ -1.19
Syne3-203ENSMUST00000109927 Krtap29-1A2A5X4 342 aa7.61□□□□□ -1.19
Syne3-203ENSMUST00000109927 Wdfy4E9Q2M9 3149 aa7.61□□□□□ -1.19
Syne3-203ENSMUST00000109927 Dmxl2Q8BPN8 3032 aa7.6□□□□□ -1.19
Syne3-203ENSMUST00000109927 Vps13aQ5H8C4 3166 aa7.59□□□□□ -1.19
Syne3-203ENSMUST00000109927 Gm21798J3QNU5 87 aa7.59□□□□□ -1.19
Syne3-203ENSMUST00000109927 Celsr1O35161 3034 aa7.58□□□□□ -1.2
Syne3-203ENSMUST00000109927 Gm16253D3Z167 63 aa7.58□□□□□ -1.2
Syne3-203ENSMUST00000109927 Sec61bQ9CQS8 96 aaKnown RBP7.57□□□□□ -1.2
Syne3-203ENSMUST00000109927 DspE9Q557 2883 aaKnown RBP7.57□□□□□ -1.2
Syne3-203ENSMUST00000109927 2310061N02RikQ9D6S9 174 aa7.55□□□□□ -1.2
Syne3-203ENSMUST00000109927 Gm4491E0CX42 125 aa7.54□□□□□ -1.2
Syne3-203ENSMUST00000109927 FrylF8VQ05 3007 aa7.54□□□□□ -1.2
Syne3-203ENSMUST00000109927 Krtap15-1Q9QZU5 150 aa7.54□□□□□ -1.2
Syne3-203ENSMUST00000109927 Fam229aB2KGE5 128 aa7.52□□□□□ -1.2
Syne3-203ENSMUST00000109927 Krtap10-4Q08EG8 221 aa7.5□□□□□ -1.21
Syne3-203ENSMUST00000109927 Ranbp2Q9ERU9 3053 aaKnown RBP7.5□□□□□ -1.21
Syne3-203ENSMUST00000109927 Unc80Q8BLN6 3261 aa7.5□□□□□ -1.21
Syne3-203ENSMUST00000109927 FlncQ8VHX6 2726 aaKnown RBP7.48□□□□□ -1.21
Syne3-203ENSMUST00000109927 Gm9955Q8CEJ8 102 aa7.47□□□□□ -1.21
Syne3-203ENSMUST00000109927 BptfA2A654 3036 aaKnown RBP7.46□□□□□ -1.21
Syne3-203ENSMUST00000109927 Gm5767A0A0J9YTU8 78 aa7.45□□□□□ -1.22
Syne3-203ENSMUST00000109927 Tnp2P11378 117 aa7.45□□□□□ -1.22
Syne3-203ENSMUST00000109927 Cystm1Q8K353 104 aa7.42□□□□□ -1.22
Syne3-203ENSMUST00000109927 Spink7Q6IE32 76 aa7.41□□□□□ -1.22
Syne3-203ENSMUST00000109927 Krtap10-10A0A1W2P7T6 217 aa7.4□□□□□ -1.22
Syne3-203ENSMUST00000109927 A730071L15RikQ8C4X0 137 aa7.4□□□□□ -1.23
Syne3-203ENSMUST00000109927 Tex15F8VPN2 2785 aa7.39□□□□□ -1.23
Syne3-203ENSMUST00000109927 Adgrg4B7ZCC9 3073 aa7.39□□□□□ -1.23
Syne3-203ENSMUST00000109927 Pla2g10Q9QXX3 151 aa7.38□□□□□ -1.23
Syne3-203ENSMUST00000109927 Gm3880A0A1B0GSB3 72 aa7.36□□□□□ -1.23
Syne3-203ENSMUST00000109927 CriptO70333 101 aa7.36□□□□□ -1.23
Syne3-203ENSMUST00000109927 Rps29P62274 56 aa7.36□□□□□ -1.23
Syne3-203ENSMUST00000109927 Krtap14O08640 167 aa7.35□□□□□ -1.23
Syne3-203ENSMUST00000109927 Gm37013Q8K491 104 aa7.34□□□□□ -1.23
Syne3-203ENSMUST00000109927 Dchs2A0A0A6YW72 3346 aa7.32□□□□□ -1.24
Syne3-203ENSMUST00000109927 Trank1Q8BV79 2999 aa7.3□□□□□ -1.24
Syne3-203ENSMUST00000109927 Gm2696A0A1W2P709 240 aa7.29□□□□□ -1.24
Syne3-203ENSMUST00000109927 Nf1Q04690 2841 aa7.29□□□□□ -1.24
Syne3-203ENSMUST00000109927 Lama1P19137 3084 aa7.28□□□□□ -1.24
Syne3-203ENSMUST00000109927 Tenm3Q9WTS6 2715 aa7.27□□□□□ -1.25
Syne3-203ENSMUST00000109927 Srrm2Q8BTI8 2703 aaKnown RBP7.24□□□□□ -1.25
Syne3-203ENSMUST00000109927 Zzef1Q5SSH7 2924 aa7.24□□□□□ -1.25
Syne3-203ENSMUST00000109927 BC029722A0A0N4SW31 51 aa7.16□□□□□ -1.26
Syne3-203ENSMUST00000109927 Col6a3E9PWQ3 3284 aa7.16□□□□□ -1.26
Syne3-203ENSMUST00000109927 Celsr2Q9R0M0 2920 aa7.15□□□□□ -1.26
Syne3-203ENSMUST00000109927 Gm19426M0QWC7 77 aa7.14□□□□□ -1.27
Syne3-203ENSMUST00000109927 Pdzd2E9Q1M1 2796 aa7.14□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms