RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Tenm1Q9WTS4 2731 aa4.35□□□□□ -1.71
Scn8a-205ENSMUST00000108910 KalrnA2CG49 2964 aa4.35□□□□□ -1.71
Scn8a-205ENSMUST00000108910 Chtf8P0CG14 533 aa4.34□□□□□ -1.71
Scn8a-205ENSMUST00000108910 Fam229bQ8CF36 80 aa4.34□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Igfn1Q3KNY0 2849 aa4.33□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Gm11213A0A1B0GR83 88 aa4.33□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Fam104aA2A6P4 185 aa4.32□□□□□ -1.72
Scn8a-205ENSMUST00000108910 CnbpP53996 178 aaKnown RBP4.32□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Zcchc13Q9D548 170 aa4.32□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Gm26620Q9CY65 116 aa4.31□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Sec61bQ9CQS8 96 aaKnown RBP4.31□□□□□ -1.72
Scn8a-205ENSMUST00000108910 BptfA2A654 3036 aaKnown RBP4.3□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Gm7138L7N2C3 230 aa4.29□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Gm3238W4VSP7 230 aa4.29□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Pla2g10Q9QXX3 151 aa4.29□□□□□ -1.72
Scn8a-205ENSMUST00000108910 2310034C09RikQ9D746 214 aa4.29□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Gm21798J3QNU5 87 aa4.28□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Jbts17Q8CE72 3214 aa4.28□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Chd9Q8BYH8 2885 aa4.28□□□□□ -1.72
Scn8a-205ENSMUST00000108910 OxtP35454 125 aa4.28□□□□□ -1.72
Scn8a-205ENSMUST00000108910 LrbaQ9ESE1 2856 aa4.28□□□□□ -1.72
Scn8a-205ENSMUST00000108910 Smim29Q8R043 75 aa4.27□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Tenm3Q9WTS6 2715 aa4.27□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Gm21887J3QQ04 176 aa4.27□□□□□ -1.73
Scn8a-205ENSMUST00000108910 FrylF8VQ05 3007 aa4.26□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Pdzd2E9Q1M1 2796 aa4.26□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Fbn2Q61555 2907 aa4.26□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Cypt14J3QPF7 87 aa4.26□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Golgb1E9PVZ8 3238 aa4.26□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Ep400Q8CHI8 3072 aaKnown RBP4.25□□□□□ -1.73
Scn8a-205ENSMUST00000108910 CriptO70333 101 aa4.24□□□□□ -1.73
Scn8a-205ENSMUST00000108910 NbdyA0A0N4SUI7 68 aa4.24□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Lelp1Q9DAE3 120 aa4.24□□□□□ -1.73
Scn8a-205ENSMUST00000108910 6030445D17RikE9Q8F9 148 aa4.24□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Gm3880A0A1B0GSB3 72 aa4.24□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Gm7137J3QMW1 236 aa4.23□□□□□ -1.73
Scn8a-205ENSMUST00000108910 Gm10065F6TJM2 114 aa4.21□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm10320E9PW43 113 aa4.21□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Cep350E9Q309 3095 aa4.21□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm9955Q8CEJ8 102 aa4.21□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm9821Q8K076 103 aa4.21□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm4491E0CX42 125 aa4.19□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Spink7Q6IE32 76 aa4.18□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm9508A0A1W2P7W0 230 aa4.17□□□□□ -1.74
Scn8a-205ENSMUST00000108910 UtrnE9Q6R7 3430 aa4.17□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Trank1Q8BV79 2999 aa4.17□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Odf3bQ5M8M2 238 aa4.16□□□□□ -1.74
Scn8a-205ENSMUST00000108910 Gm10139O88245 57 aa4.15□□□□□ -1.74
Scn8a-205ENSMUST00000108910 MgaA2AWL7 3003 aaKnown RBP4.15□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Chd7A2AJK6 2986 aaKnown RBP4.15□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Megf8P60882 2789 aa4.14□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Cystm1Q8K353 104 aa4.14□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Myo15bI7HPW8 3033 aa4.14□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Gm11565A2A4M7 156 aa4.13□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Krtap15-1Q9QZU5 150 aa4.12□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Sprr1aQ62266 144 aa4.12□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Dmxl1Q6PNC0 3013 aa4.1□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Celsr2Q9R0M0 2920 aa4.09□□□□□ -1.75
Scn8a-205ENSMUST00000108910 Gm37013Q8K491 104 aa4.09□□□□□ -1.75
Scn8a-205ENSMUST00000108910 NbeaQ9EPN1 2936 aa4.09□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Prune2Q52KR3 3084 aa4.08□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Gm36176A0A1W2P8D5 158 aa4.08□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Gm17349F7BGH6 99 aa4.08□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Gm16253D3Z167 63 aa4.06□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Lama2Q60675 3118 aaKnown RBP4.06□□□□□ -1.76
Scn8a-205ENSMUST00000108910 A730071L15RikQ8C4X0 137 aa4.06□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Gm3646F6S692 53 aa4.06□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Camk2n1Q6QWF9 78 aa4.05□□□□□ -1.76
Scn8a-205ENSMUST00000108910 VwfQ8CIZ8 2813 aa4.03□□□□□ -1.76
Scn8a-205ENSMUST00000108910 Fam229aB2KGE5 128 aa4.01□□□□□ -1.77
Scn8a-205ENSMUST00000108910 TrioQ0KL02 3102 aa4.01□□□□□ -1.77
Scn8a-205ENSMUST00000108910 FryE9Q8I9 3020 aa4.01□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Krtap29-1A2A5X4 342 aa4□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Dmxl2Q8BPN8 3032 aa4□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Tenm4Q3UHK6 2771 aa3.99□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Ranbp2Q9ERU9 3053 aaKnown RBP3.98□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Gm5767A0A0J9YTU8 78 aa3.98□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Rpl37Q9D823 97 aa3.98□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Lama3Q61789 3330 aa3.97□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Romo1P60603 79 aa3.97□□□□□ -1.77
Scn8a-205ENSMUST00000108910 Gm9507D3Z5T3 223 aa3.94□□□□□ -1.78
Scn8a-205ENSMUST00000108910 2310050C09RikG5E8Z3 280 aa3.94□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Krtap13O88375 197 aa3.94□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Gm19426M0QWC7 77 aa3.92□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Cfap54Q8C6S9 3106 aa3.92□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Gm10382Q3V0T5 144 aa3.92□□□□□ -1.78
Scn8a-205ENSMUST00000108910 BC029722A0A0N4SW31 51 aa3.92□□□□□ -1.78
Scn8a-205ENSMUST00000108910 4933415A04RikQ9D443 101 aa3.92□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Rev3lQ61493 3122 aa3.91□□□□□ -1.78
Scn8a-205ENSMUST00000108910 1700042G07RikB1AUF7 90 aa3.9□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Vps13aQ5H8C4 3166 aa3.9□□□□□ -1.78
Scn8a-205ENSMUST00000108910 Tenm2Q9WTS5 2764 aa3.9□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Mki67E9PVX6 3177 aaKnown RBP3.89□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Krtap10-4Q08EG8 221 aa3.89□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Gm2310J3QNJ2 377 aa3.88□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Zfhx3Q61329 3726 aa3.88□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Usp34Q6ZQ93 3582 aa3.88□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Krtap14O08640 167 aa3.88□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Wdfy4E9Q2M9 3149 aa3.87□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Lama1P19137 3084 aa3.87□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms